FFCP PHASE1:Hg19::chr5:169694286..169694300,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3937 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6529 | |||
|TSSclassifier=strong | |||
|UniProt=E7ESF6 | |||
|association_with_transcript=0bp_to_ENST00000521416_5end | |||
|coexpression_cluster_id=C99 | |||
|description=CAGE_peak_13_at_LCP2_5end | |||
|id=chr5:169694286..169694300,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000097;3.26e-11;5!CL:0000163;8.37e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,3.60e-11,5;CL:0002028,3.60e-11,5;CL:0000163,8.85e-07,9 | |||
|ontology_enrichment_development_v019=UBERON:0006241;9.45e-18;3!UBERON:0003057;9.45e-18;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.34e-46!115;UBERON:0001049!6.28e-36!57;UBERON:0005068!6.28e-36!57;UBERON:0006241!6.28e-36!57;UBERON:0007135!6.28e-36!57;UBERON:0002020!3.00e-31!34;UBERON:0003528!3.00e-31!34;UBERON:0001869!3.56e-30!32;UBERON:0002616!6.11e-29!59;UBERON:0001017!1.27e-28!82;UBERON:0001893!3.72e-28!34;UBERON:0002780!3.97e-28!41;UBERON:0001890!3.97e-28!41;UBERON:0006240!3.97e-28!41;UBERON:0000955!7.36e-28!69;UBERON:0006238!7.36e-28!69;UBERON:0003080!2.43e-27!42;UBERON:0005743!6.11e-27!86;UBERON:0002791!8.29e-26!33;UBERON:0003075!4.16e-25!86;UBERON:0007284!4.16e-25!86;UBERON:0002619!1.18e-24!22;UBERON:0000073!1.15e-23!94;UBERON:0001016!1.15e-23!94;UBERON:0002346!1.19e-23!90;UBERON:0001950!2.40e-23!20;UBERON:0000956!2.15e-21!25;UBERON:0000203!2.15e-21!25;UBERON:0000200!1.19e-19!6;UBERON:0003056!4.46e-19!61;UBERON:0000153!5.22e-15!129;UBERON:0007811!5.22e-15!129;UBERON:0000033!6.38e-15!123;UBERON:0004121!1.24e-11!169;UBERON:0002308!1.97e-11!9;UBERON:0000125!1.97e-11!9;UBERON:0000924!3.47e-11!173;UBERON:0006601!3.47e-11!173;UBERON:0001872!7.03e-11!5;UBERON:0002771!1.53e-10!3;UBERON:0000988!3.27e-10!3;UBERON:0003076!1.35e-09!15;UBERON:0003057!1.35e-09!15;UBERON:0002298!1.49e-09!8;UBERON:0001870!8.98e-08!2;UBERON:0002148!2.52e-07!2;UBERON:0009662!2.52e-07!2;UBERON:0000025!4.62e-07!194;UBERON:0000369!5.92e-07!4;UBERON:0002435!5.92e-07!4;UBERON:0000204!5.92e-07!4;UBERON:0010082!5.92e-07!4;UBERON:0009663!8.44e-07!7;UBERON:0001871!9.36e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0002240;9.45e-18;3!UBERON:0005174;9.45e-18;3!UBERON:0001137;9.45e-18;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002240,9.46e-18,3;UBERON:0005174,9.46e-18,3;UBERON:0001137,9.46e-18,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0.289803085735052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47798971368783,0.792435906119034,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0.540911356951966,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0.969332746095218,0.556608588971108,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0.438770794307945,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.468528891450678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0,0,0,0,0,0.50648636764703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0,11.5670435882898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0,0,0,0,0,0,0.303747783290123,0,0.0788057072991982,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517131825446202,0.26446520348538,0,0,0,0,0,0,1.58089305518355,0,0,0,0,0,0,0,0.886068179966986,0.366078794705889,0.625954653532499,0,0.110929051536852,0.310482014706917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553033744606923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.319267718114302,0,0,0.207471757392654,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.87798860003913,0.781078098613847,0.413373593002368,0.824405532520789,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0.40781839786099,0.394636641377094,0,0,0.706437835654626,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.981542335574726,1.48523200163543,0,0,0.845855261818682,0.709036767709349,0,0,0,0,0,0,0,0,0.611923411718232,0,0,0,0,0,0,0.218531143927391,0,0,0,0,0,0.151557396436479,0.267964130156178,0,0.310298987585686,0,0,0.0645889098360061,0,0,0,0,0,0,0.0673520530145875,0.0717222053926763,0,0,0,0,0,0,0.122241444182866,0,0,0.201273793591026,0 | |||
|short_description=p13@LCP2 | |||
}} |
Revision as of 08:57, 22 January 2014
Short description: | p13@LCP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_LCP2_5end |
Coexpression cluster: | C99_hairy_mycosis_submaxillary_salivary_cord_kidney_parotid |
Association with transcript: | 0bp_to_ENST00000521416_5end |
EntrezGene: | LCP2 |
HGNC: | 6529 |
UniProt: | E7ESF6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 3.60e-11 | 5 |
basophil mast progenitor cell | 3.60e-11 | 5 |
endocrine cell | 8.85e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
spinal cord | 9.46e-18 | 3 |
dorsal region element | 9.46e-18 | 3 |
dorsum | 9.46e-18 | 3 |