FFCP PHASE1:Hg19::chr5:7891424..7891428,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=4552 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7473 | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=-53bp_to_ENST00000507202_5end | |||
|coexpression_cluster_id=C237 | |||
|description=CAGE_peak_3_at_MTRR_5end | |||
|id=chr5:7891424..7891428,+ | |||
|ontology_enrichment_celltype=CL:0002087!3.87e-16!119;CL:0000037!3.99e-15!172;CL:0000566!3.99e-15!172;CL:0002032!1.23e-14!165;CL:0000837!1.23e-14!165;CL:0000542!2.16e-14!53;CL:0000051!2.16e-14!53;CL:0002031!3.46e-14!124;CL:0000838!6.68e-14!52;CL:0000738!8.15e-14!140;CL:0000988!1.28e-13!182;CL:0000084!2.10e-09!25;CL:0000827!2.10e-09!25;CL:0000791!2.35e-07!18;CL:0000789!2.35e-07!18;CL:0002420!2.35e-07!18;CL:0002419!2.35e-07!18;CL:0000790!2.35e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000084;2.53e-14;25!CL:0000542;1.99e-10;53!CL:0000791;3.62e-10;18!CL:0000789;3.62e-10;18!CL:0002419;3.62e-10;18!CL:0000624;2.92e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,4.41e-17,53;CL:0000051,4.41e-17,53;CL:0000838,6.96e-16,52;CL:0002087,9.13e-16,115;CL:0000084,1.84e-14,25;CL:0000827,1.84e-14,25;CL:0000037,5.58e-14,168;CL:0002032,4.90e-13,161;CL:0000837,4.90e-13,161;CL:0000738,5.24e-13,136;CL:0000988,9.70e-13,177;CL:0002031,1.22e-12,120;CL:0000791,1.65e-10,18;CL:0000789,1.65e-10,18;CL:0002420,1.65e-10,18;CL:0002419,1.65e-10,18;CL:0000790,1.65e-10,18;CL:0000624,1.93e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000051;1.99e-10;53!CL:0000790;3.62e-10;18 | |||
|ontology_enrichment_disease=DOID:162!3.55e-13!235;DOID:14566!2.55e-12!239;DOID:0050686!8.84e-10!137;DOID:0050687!1.01e-07!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;9.35e-07;2!UBERON:0002757;9.35e-07;2!UBERON:0010134;9.35e-07;2!UBERON:0005408;9.35e-07;2!UBERON:0001899;9.35e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,8.85e-07,2;UBERON:0002757,8.85e-07,2;UBERON:0010134,8.85e-07,2;UBERON:0005408,8.85e-07,2;UBERON:0001899,8.85e-07,2 | |||
|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730310090387373,0,0.123121058076788,0,0,0.572471974262113,0.684372125364421,0.251085279189606,0.305653622991805,0.328402357799783,0.157421562627358,0,0.383829398097213,0.309632246632152,0,0,0,0.387336002901508,1.42169232487422,0,1.66198622559563,1.40381113229099,1.51907609501096,0.223915474239924,0.647787332037959,0,0.290796477559129,0.755751887377619,0,0.232429036905685,0.822335776043652,0,0.28769239232215,0.256160706529101,0.47296445977717,1.72372840368309,0,1.35426486594342,0.376484679085209,0,0.224723484445085,0.612167784741805,0.641858054152187,2.55734850319616,0.329851300186716,0.598390972864896,0,0.290209238628584,1.70215567407342,0,0.251248665256743,0.521482918420201,0,1.21079900526674,0,0.316462387440884,0.633765858935825,0.637812899895131,0,0.336985893439485,1.50176892841506,0.16072558669708,0,0.19891667719909,1.0959849225878,0,1.63841583378639,0.889509253863555,0.853460445133014,0.800791974072025,1.72425731986345,0.661044872784862,0,1.1384259382189,1.17447437874188,0.764546456250458,0,0,0.526768169550154,1.57367816091066,1.57204305099666,2.2616164889946,0,0.32592226663359,0.946895611469467,0,0.668462741311041,2.3568472597987,1.55073726208535,1.62482318259009,1.15282187753108,1.43065282315866,1.80881695064044,1.10540007114339,0.289803085735052,0.593146252648242,0.535081656179426,1.04535523804977,0.793165398882963,0.383220493601921,0.68725489096526,0.506039384039006,1.59282707162048,1.30216690771284,0.950452044448374,0.451725357233318,0.383959833463255,2.49861453104692,0,0.821127996921047,0.80642697289893,3.20928234940209,1.88271725047639,0,0,0,0,0,0.144846518960824,0,0.486634870302636,0.283604451492204,0,0.175669571386252,0.261958150995425,0,0,0.324547393654683,0.522389211897802,0.664789802594326,0.715471872916026,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.357198913136319,0.22452937262617,0,0,0,0,0,0,0,0.496971951695318,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0.140450806702248,0,0.859840221182376,0.206651562351531,0,0,0,0,0.336672227908132,0.250237039743928,0,0.438977620880838,0.612975591598039,0.150238058906597,0,0.538168907066586,0,0.211931901159562,0.600182192168805,0.206105058476878,0,0,0.843881661206331,0,0.252433774244115,0,0,0,0.10075209822764,0.339121184620975,0.193260853163297,0.545492241181669,0,0.609868530647977,0.132529768321485,0.232387885739037,0.10366105501537,0,0.36497735907583,0,0,0,0.464367928031979,0,0.354920400119532,0.168584690078102,0.482022059766964,0.110293972732394,0,0,0,0.196221465125346,0,0,0,0,0,1.26755034821831,0,1.77236972004421,1.7658523976586,0,0.343135620597051,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0.858486162094873,0,0.468008530278475,0,0,0,0,0.0895585227028483,0,0.383382679165211,0.492663237895943,0,0.207328115540772,0.288239906833923,0,0.126995788584338,0,0,0,0,0.300343057843917,0,0,0,0.07333828582095,0.258543431515556,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0,0,0,2.10833939483032,0,0,0,0.289562613335158,0,0.358121926479791,0.224170287987055,0.985153801009636,1.72502059887614,1.79680250791648,1.27047312111232,0,0.773288812777695,0.167516265334349,0.637938751653163,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0.0868836144680828,0,0,0.620304078368662,1.50999940573032,0.213455115606889,0,0,0,0,0.306923946576125,0.280660094433074,0,0,0,0,0,0,0.0821271560138091,0,0,0.120859449591622,0.200506470303285,0.0920809889358963,0,0.182091168006717,0.131124414959424,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0.457847324091717,0.41254749960294,0,0,0,0.290012154876366,0.308097234229289,0.460511024178389,0.551346289938122,0.429680979473094,0.435050081742686,0.0852266274161009,0,0,0.384380134730212,1.27612712494584,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0.282810863907425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470719003883896,0,0,0,0.229723400206959,0.507447609232169,0,0,0.238231775457789,0.822724546172388,1.29694662238543,0,0,0,0,0.980160863924127,1.11481905075431,0.432807638929335,1.56512055366511,0.797131363644112,0.798317485731266,0,1.48171507906718,0.649243880549111,1.40398589056729,0.912938716132769,0.783399478865116,15.038068625404,0,0.481764225311099,0.605399121573143,1.70338495076131,0.687010689511529,0.921722292925374,0.223676107892416,0.333698283423817,0.19538809540204,0.278406173895242,0,1.08182271390393,0.66614393599564,0,0,0.146508179271894,0.485442086998054,1.00299045849731,1.13654458722565,0.23874448473769,0.296964680832639,0.307160702099232,0.994147647766298,0.844016498463076,0.222617410045812,1.6480387422676,2.11125408127993,0.19924798825107,0.276283915531148,0.755798243562828,0.409074730008619,0.369254416383208,0.311039587661807,0.0898683511473268,0.716084698702437,0,0.197286811273867,0,0,0,0.371072392647405,1.99613798001194,0.260427761085233,0.262379999988587,0,0.227586896570999,0.508507300585533,0.945550727071745,0.689486746482929,1.1664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| |||
|short_description=p3@MTRR | |||
}} |
Revision as of 04:37, 22 January 2014
Short description: | p3@MTRR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_MTRR_5end |
Coexpression cluster: | C237_acute_breast_testicular_hepatoblastoma_chronic_argyrophil_Bronchial |
Association with transcript: | -53bp_to_ENST00000507202_5end |
EntrezGene: | MTRR |
HGNC: | 7473 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 4.41e-17 | 53 |
common lymphoid progenitor | 4.41e-17 | 53 |
lymphoid lineage restricted progenitor cell | 6.96e-16 | 52 |
nongranular leukocyte | 9.13e-16 | 115 |
T cell | 1.84e-14 | 25 |
pro-T cell | 1.84e-14 | 25 |
hematopoietic stem cell | 5.58e-14 | 168 |
hematopoietic oligopotent progenitor cell | 4.90e-13 | 161 |
hematopoietic multipotent progenitor cell | 4.90e-13 | 161 |
leukocyte | 5.24e-13 | 136 |
hematopoietic cell | 9.70e-13 | 177 |
hematopoietic lineage restricted progenitor cell | 1.22e-12 | 120 |
mature alpha-beta T cell | 1.65e-10 | 18 |
alpha-beta T cell | 1.65e-10 | 18 |
immature T cell | 1.65e-10 | 18 |
mature T cell | 1.65e-10 | 18 |
immature alpha-beta T cell | 1.65e-10 | 18 |
CD4-positive, alpha-beta T cell | 1.93e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
pineal body | 8.85e-07 | 2 |
regional part of epithalamus | 8.85e-07 | 2 |
secretory circumventricular organ | 8.85e-07 | 2 |
circumventricular organ | 8.85e-07 | 2 |
epithalamus | 8.85e-07 | 2 |