FFCP PHASE1:Mm9::chr19:7062111..7062254,-: Difference between revisions
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{{FFCP|EntrezGene=22340|HGNC=|MCL_coexpression_id=10|UniProt=P49766|association_with_transcript=0bp_to_ENSMUST00000025914,ENSMUST00000130048,NM_001185164,NM_011697,uc008gjv.2,uc008gjw.2_5end|description=CAGE_peak_1_at_Vegfb_5end|id=chr19:7062111..7062254,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004535!6.12e-09!23;UBERON:0001009!6.12e-09!23;UBERON:0003103!1.69e-08!43;UBERON:0007100!2.11e-08!18;UBERON:0000948!2.11e-08!18;UBERON:0005498!2.11e-08!18;UBERON:0004140!2.11e-08!18;UBERON:0009881!2.11e-08!18;UBERON:0004141!2.11e-08!18;UBERON:0003084!2.11e-08!18;UBERON:0007005!2.11e-08!18;UBERON:0004139!2.11e-08!18;UBERON:0004291!2.11e-08!18|ontology_enrichment_uberon_v019_2=UBERON:0004535,6.12e-09,23;UBERON:0001009,6.12e-09,23;UBERON:0010314,9.94e-09,92;UBERON:0003103,1.69e-08,43;UBERON:0007100,2.11e-08,18;UBERON:0000948,2.11e-08,18;UBERON:0005498,2.11e-08,18;UBERON:0004140,2.11e-08,18;UBERON:0009881,2.11e-08,18;UBERON:0004141,2.11e-08,18;UBERON:0003084,2.11e-08,18;UBERON:0007005,2.11e-08,18;UBERON:0004139,2.11e-08,18;UBERON:0004291,2.11e-08,18|phase1_expression=31.2290251854348,2.09385244583617,1.36499771816861,3.0246421130683,1.00179145989269,11.4157904900085,7.70921713965235,4.26106967357202,5.20918271961167,7.2560003159818,1.88339765048055,4.3874687447435,2.05440875917447,3.58423649917889,13.3243904726265,13.3633676477285,9.79386629379405,11.0411757875383,7.67840828192137,6.36584477697045,47.1139827436927,39.5177985779523,32.388773853228,5.59973479776923,10.3234176480227,4.01962374880514,3.01533397311352,5.817723282519,7.41091335879858,10.3332353201572,7.98229838359097,27.9413496322238,38.1340168302433,0,15.5979874665688,24.2702582223399,21.4377824075488,0.418531630736908,0,0,0,0,0,78.937304870687,92.5571382034168,53.7791983833727,84.4982651895882,81.541408486287,56.2396627800248,57.5512501259879,47.1754240877472,92.0016411935818,4.53013036355888,2.17608642603403,8.06625117941913,25.2114247315228,35.8166799923446,27.3306208907044,43.7003555456731,34.3844136526821,37.3960528068646,48.793612617955,49.8005085822238,74.2417266757154,68.2317790171212,79.5737728739632,92.2768340396687,102.586287520855,47.2824632126658,40.9067993145023,46.271491497304,96.2643817440818,71.7822758092744,42.2593257291591,38.8174157623857,28.4957823849107,92.4973400394865,77.1231522034534,84.3299867576777,35.2136388239618,36.1376192229518,33.3384557156326,104.135258627515,75.4101897442451,84.3446327727992,68.6484604153646,66.345203252382,62.2574149056504,11.5861075799772,36.1232057310435,18.2614627882057,29.2544118173671,41.4782513561728,30.7630819233556,22.7421746106684,18.8171292580881,136.792865208326,62.8887890313033,64.4269291415115,48.0541821334063,35.9150720430535,42.3477375467249,63.7013099266614,92.4386714099331,11.9070072556168,12.6679932737549,13.1436355703844,57.4344914986872,11.1343289968284,79.4165443996813,44.5857289788969,46.5832181817576,51.196640390845,42.8052299169448,46.9178941471462,86.2072816521574,30.8993709667967,320.142976220684,68.1150125001403,61.6331698299629,75.748640831915,48.9724005666574,42.8701050801681,78.1724728020831,58.2261844941405,26.8229907969021,14.7372603142282,20.9965955847693,13.2153036155987,110.096119962545,69.5400916284312,37.9476143380851,53.3640662990289,41.9373350021742,107.426419037293,61.9761624918834,38.9026369908208,43.7912536547527,16.9324248150562,57.2401848011209,66.751787239867,54.7167008551666,62.8416833020669,47.9241320717574,51.3675568592525,40.7401630505822,48.724896771059,61.5714022358857,76.0955015052933,62.2159003752125,52.4334350008568,60.0596306851555,37.5363786454557,35.521720985261,29.4268455063359,40.8020246977911,21.066395619397,15.4408744268829,16.1973194655488,157.829838672052,146.344261428204,158.994800270076,203.363727867696,220.57270378884,210.266074865497,273.69245297123,296.978655349378,229.443897751488,251.447450667798,245.922861190485,382.563712246893,417.400964099324,427.903174702258,429.72895287071,47.1049484783645,35.6049958832324,4.95628174475697,15.3381328664856,46.2835503661458,43.6604943097624,46.6500209985978,48.2023623849789,55.3721329173727,56.3067853293175,13.2868137232463,27.6694243936338,31.9195715176342,28.4507755018846,28.2697926322724,11.6846523125049,15.1296634912286,15.9313018603494,52.5380085640036,29.933110303749,61.9892546201942,49.283621338566,50.8155516379179,47.2014067861844,56.3437545777132,82.2188524246384,73.9464008132875,92.177681449585,53.0650202485997,35.3711624118119,27.5182593158484,26.084005036643,23.7346342024548,34.4883338445956,31.3189797691146,35.9620171813513,27.8872590053061,19.2192989231657,76.1971494594979,30.8876986564858,25.587089195394,26.2682033064996,29.6005732311155,46.7970215722466,35.6573657021547,47.7518357661622,40.7412441105065,42.9455067011226,38.0198202227373,38.6939454690594,44.7522044865706,33.1727201358258,32.157569397663,26.3542980682042,25.5127629851979,27.3651735575282,30.21987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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:22340 | |||
|HGNC= | |||
|MCL_coexpression_id=10 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:P49766 | |||
|association_with_transcript=0bp_to_ENSMUST00000025914,ENSMUST00000130048,NM_001185164,NM_011697,uc008gjv.2,uc008gjw.2_5end | |||
|cluster_id=chr19:7062111..7062254,- | |||
|description=CAGE_peak_1_at_Vegfb_5end | |||
|id=chr19:7062111..7062254,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004535!6.12e-09!23;UBERON:0001009!6.12e-09!23;UBERON:0003103!1.69e-08!43;UBERON:0007100!2.11e-08!18;UBERON:0000948!2.11e-08!18;UBERON:0005498!2.11e-08!18;UBERON:0004140!2.11e-08!18;UBERON:0009881!2.11e-08!18;UBERON:0004141!2.11e-08!18;UBERON:0003084!2.11e-08!18;UBERON:0007005!2.11e-08!18;UBERON:0004139!2.11e-08!18;UBERON:0004291!2.11e-08!18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004535,6.12e-09,23;UBERON:0001009,6.12e-09,23;UBERON:0010314,9.94e-09,92;UBERON:0003103,1.69e-08,43;UBERON:0007100,2.11e-08,18;UBERON:0000948,2.11e-08,18;UBERON:0005498,2.11e-08,18;UBERON:0004140,2.11e-08,18;UBERON:0009881,2.11e-08,18;UBERON:0004141,2.11e-08,18;UBERON:0003084,2.11e-08,18;UBERON:0007005,2.11e-08,18;UBERON:0004139,2.11e-08,18;UBERON:0004291,2.11e-08,18 | |||
|phase1_expression=31.2290251854348,2.09385244583617,1.36499771816861,3.0246421130683,1.00179145989269,11.4157904900085,7.70921713965235,4.26106967357202,5.20918271961167,7.2560003159818,1.88339765048055,4.3874687447435,2.05440875917447,3.58423649917889,13.3243904726265,13.3633676477285,9.79386629379405,11.0411757875383,7.67840828192137,6.36584477697045,47.1139827436927,39.5177985779523,32.388773853228,5.59973479776923,10.3234176480227,4.01962374880514,3.01533397311352,5.817723282519,7.41091335879858,10.3332353201572,7.98229838359097,27.9413496322238,38.1340168302433,0,15.5979874665688,24.2702582223399,21.4377824075488,0.418531630736908,0,0,0,0,0,78.937304870687,92.5571382034168,53.7791983833727,84.4982651895882,81.541408486287,56.2396627800248,57.5512501259879,47.1754240877472,92.0016411935818,4.53013036355888,2.17608642603403,8.06625117941913,25.2114247315228,35.8166799923446,27.3306208907044,43.7003555456731,34.3844136526821,37.3960528068646,48.793612617955,49.8005085822238,74.2417266757154,68.2317790171212,79.5737728739632,92.2768340396687,102.586287520855,47.2824632126658,40.9067993145023,46.271491497304,96.2643817440818,71.7822758092744,42.2593257291591,38.8174157623857,28.4957823849107,92.4973400394865,77.1231522034534,84.3299867576777,35.2136388239618,36.1376192229518,33.3384557156326,104.135258627515,75.4101897442451,84.3446327727992,68.6484604153646,66.345203252382,62.2574149056504,11.5861075799772,36.1232057310435,18.2614627882057,29.2544118173671,41.4782513561728,30.7630819233556,22.7421746106684,18.8171292580881,136.792865208326,62.8887890313033,64.4269291415115,48.0541821334063,35.9150720430535,42.3477375467249,63.7013099266614,92.4386714099331,11.9070072556168,12.6679932737549,13.1436355703844,57.4344914986872,11.1343289968284,79.4165443996813,44.5857289788969,46.5832181817576,51.196640390845,42.8052299169448,46.9178941471462,86.2072816521574,30.8993709667967,320.142976220684,68.1150125001403,61.6331698299629,75.748640831915,48.9724005666574,42.8701050801681,78.1724728020831,58.2261844941405,26.8229907969021,14.7372603142282,20.9965955847693,13.2153036155987,110.096119962545,69.5400916284312,37.9476143380851,53.3640662990289,41.9373350021742,107.426419037293,61.9761624918834,38.9026369908208,43.7912536547527,16.9324248150562,57.2401848011209,66.751787239867,54.7167008551666,62.8416833020669,47.9241320717574,51.3675568592525,40.7401630505822,48.724896771059,61.5714022358857,76.0955015052933,62.2159003752125,52.4334350008568,60.0596306851555,37.5363786454557,35.521720985261,29.4268455063359,40.8020246977911,21.066395619397,15.4408744268829,16.1973194655488,157.829838672052,146.344261428204,158.994800270076,203.363727867696,220.57270378884,210.266074865497,273.69245297123,296.978655349378,229.443897751488,251.447450667798,245.922861190485,382.563712246893,417.400964099324,427.903174702258,429.72895287071,47.1049484783645,35.6049958832324,4.95628174475697,15.3381328664856,46.2835503661458,43.6604943097624,46.6500209985978,48.2023623849789,55.3721329173727,56.3067853293175,13.2868137232463,27.6694243936338,31.9195715176342,28.4507755018846,28.2697926322724,11.6846523125049,15.1296634912286,15.9313018603494,52.5380085640036,29.933110303749,61.9892546201942,49.283621338566,50.8155516379179,47.2014067861844,56.3437545777132,82.2188524246384,73.9464008132875,92.177681449585,53.0650202485997,35.3711624118119,27.5182593158484,26.084005036643,23.7346342024548,34.4883338445956,31.3189797691146,35.9620171813513,27.8872590053061,19.2192989231657,76.1971494594979,30.8876986564858,25.587089195394,26.2682033064996,29.6005732311155,46.7970215722466,35.6573657021547,47.7518357661622,40.7412441105065,42.9455067011226,38.0198202227373,38.6939454690594,44.7522044865706,33.1727201358258,32.157569397663,26.3542980682042,25.5127629851979,27.3651735575282,30.2198718265317,32.2567400636771,34.6819953060326,23.3879444042045,47.7011344828465,45.5295631402809,133.417540279855,99.7471452899649,51.8034427390294,155.522091157894,61.5241027861701,51.1474755028596,45.4543369216206,84.3559856772509,65.7256088543063,64.258372489065,83.7958152467031,63.1272653088434,56.9214400242994,73.261260144172,58.0534948501819,73.0068975035746,40.5588528790404,58.3994235322776,98.2314023715725,36.9026566955572,47.1624748865012,54.6954731292105,84.7516432567818,87.9264523119633,41.3485269069154,67.9808074122935,62.743538595711,40.4527050157844,45.3300016872495,66.0067476788396,26.8947288545492,44.8352124137962,47.9920716834019,43.2960810763816,34.5813455602433,39.7762463252617,42.7827453565515,50.8456465021381,26.9872464273267,23.513359865884,55.5731563098504,49.1361033765611,34.5533873129238,32.8102311609168,22.6807453605959,15.5933854757808,15.7399651780119,137.214723487777,24.6054068348908,39.8326655169019,26.8532064686082,16.1996873024034,18.1803322868963,15.328137604837,16.487907709404,21.5525236578433,17.1367967517486,189.024782366992,48.2412390211231,40.4605739582429,38.1258853100958,41.1903943148503,35.1563727631346,34.5252726745141,43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| |||
|short_description=p1@Vegfb | |||
}} |
Revision as of 13:00, 4 August 2015
Short description: | p1@Vegfb |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Vegfb_5end |
Coexpression cluster: | MCL_coexpression_mm9:10 |
Association with transcript: | 0bp_to_ENSMUST00000025914, ENSMUST00000130048, NM_001185164, NM_011697, uc008gjv.2, uc008gjw.2_5end |
EntrezGene: | 22340 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiovascular system | 6.12e-09 | 23 |
circulatory system | 6.12e-09 | 23 |
structure with developmental contribution from neural crest | 9.94e-09 | 92 |
compound organ | 1.69e-08 | 43 |
primary circulatory organ | 2.11e-08 | 18 |
heart | 2.11e-08 | 18 |
primitive heart tube | 2.11e-08 | 18 |
primary heart field | 2.11e-08 | 18 |
anterior lateral plate mesoderm | 2.11e-08 | 18 |
heart tube | 2.11e-08 | 18 |
heart primordium | 2.11e-08 | 18 |
cardiac mesoderm | 2.11e-08 | 18 |
cardiogenic plate | 2.11e-08 | 18 |
heart rudiment | 2.11e-08 | 18 |