FFCP PHASE1:Hg19::chr6:143382002..143382064,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51390 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21607 | |||
|TSSclassifier=strong | |||
|UniProt=Q9NVV5,Q5THU2 | |||
|association_with_transcript=0bp_to_ENST00000275235,ENST00000344492,ENST00000357847,ENST00000367596,NM_016108,uc003qjg.2,uc003qjh.2,uc011edw.1_5end | |||
|description=CAGE_peak_1_at_AIG1_5end | |||
|id=chr6:143382002..143382064,+ | |||
|ontology_enrichment_celltype=CL:0000223!6.13e-13!59;CL:0000066!1.44e-11!254;CL:0002076!1.63e-10!43 | |||
|ontology_enrichment_celltype_v019=CL:0002076;2.03e-08;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0000223,1.14e-12,58;CL:0000066,1.01e-11,253;CL:0002076,3.00e-10,42 | |||
|ontology_enrichment_development_v019=CL:0000223;4.88e-08;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!9.91e-16!365;UBERON:0000481!4.07e-13!347;UBERON:0004121!3.13e-10!169;UBERON:0000033!4.85e-10!123;UBERON:0000062!1.81e-09!511;UBERON:0000119!2.83e-09!312;UBERON:0000483!5.02e-09!309;UBERON:0000924!7.51e-09!173;UBERON:0006601!7.51e-09!173;UBERON:0000153!1.04e-08!129;UBERON:0007811!1.04e-08!129;UBERON:0004111!8.99e-08!241;UBERON:0004119!1.07e-07!169;UBERON:0000925!1.07e-07!169;UBERON:0006595!1.07e-07!169;UBERON:0005911!3.29e-07!82;UBERON:0003075!4.00e-07!86;UBERON:0007284!4.00e-07!86;UBERON:0005177!4.03e-07!107;UBERON:0000480!5.93e-07!626;UBERON:0005743!6.74e-07!86;UBERON:0000467!7.28e-07!625 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0011216,2.91e-10,223;UBERON:0000119,1.47e-09,309;UBERON:0000483,2.62e-09,306;UBERON:0004121,4.85e-09,171;UBERON:0000924,4.85e-09,171;UBERON:0006601,4.85e-09,171;UBERON:0010371,7.09e-09,104;UBERON:0004111,3.17e-08,240;UBERON:0004119,4.50e-08,160;UBERON:0000925,4.50e-08,160;UBERON:0006595,4.50e-08,160;UBERON:0003075,1.93e-07,82;UBERON:0007284,1.93e-07,82;UBERON:0005911,3.29e-07,82 | |||
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| |||
|short_description=p1@AIG1 | |||
}} |
Revision as of 14:22, 22 January 2014
Short description: | p1@AIG1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_AIG1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000275235, ENST00000344492, ENST00000357847, ENST00000367596, NM_016108, uc003qjg.2, uc003qjh.2, uc011edw.1_5end |
EntrezGene: | AIG1 |
HGNC: | 21607 |
UniProt: | Q9NVV5Q5THU2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endodermal cell | 1.14e-12 | 58 |
epithelial cell | 1.01e-11 | 253 |
endo-epithelial cell | 3.00e-10 | 42 |
Ontology term | p-value | n |
---|---|---|
organ system subdivision | 2.91e-10 | 223 |
cell layer | 1.47e-09 | 309 |
epithelium | 2.62e-09 | 306 |
ectoderm-derived structure | 4.85e-09 | 171 |
ectoderm | 4.85e-09 | 171 |
presumptive ectoderm | 4.85e-09 | 171 |
ecto-epithelium | 7.09e-09 | 104 |
anatomical conduit | 3.17e-08 | 240 |
endoderm-derived structure | 4.50e-08 | 160 |
endoderm | 4.50e-08 | 160 |
presumptive endoderm | 4.50e-08 | 160 |
neural plate | 1.93e-07 | 82 |
presumptive neural plate | 1.93e-07 | 82 |
endo-epithelium | 3.29e-07 | 82 |