FFCP PHASE1:Mm9::chr1:33726640..33726651,-: Difference between revisions
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{{FFCP|EntrezGene=19076|HGNC=|UniProt=P33610|association_with_transcript=-9bp_to_ENSMUST00000027312_5end|description=CAGE_peak_2_at_Prim2_5end|id=chr1:33726640..33726651,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000473!1.70e-07!14;UBERON:0003135!1.96e-07!15|ontology_enrichment_uberon_v019_2=UBERON:0000473,7.66e-10,14;UBERON:0003135,6.33e-09,15;UBERON:0004176,1.19e-08,17;UBERON:0009196,1.19e-08,17;UBERON:0009117,1.19e-08,17;UBERON:0003101,3.97e-08,16;UBERON:0000079,3.97e-08,16;UBERON:0000991,6.09e-08,18;UBERON:0005564,6.09e-08,18|phase1_expression=0.320297694209588,0,0,0,0,0.16787927191189,0.233612640595526,0.129123323441576,0,0,0,0.159544317990673,0,0.174840804837995,0.999329285446988,2.63217847606774,1.39912375625629,0.630924330716475,0.822686601634433,0,1.27564935226605,1.48936426801328,0.261199789138935,0.159992422793407,0.45881856213434,0,0,0.430942465371778,0,0.252030129759931,0.221730510655305,3.17515336729816,1.23012957516914,0,0.577703239502549,0.664938581433969,1.02084678131185,0,0.7813353445238,0,0,0.683045484958446,0,0.881277725829041,0.811015449756117,0,0.782391344348039,0.218025156380447,0.219686182734472,0.777719596297134,0.699932108126813,0,0.503347818173209,0.725362142011344,0,1.02903774414379,0.286533439938757,0.515672092277442,0.202316460859598,0.528990979272033,0.633831403506179,0.677689064138264,0,0,0,0,0.299600110518405,0.384218305321555,0.829516898467821,1.08004750665353,1.26194976810829,0.571301968807607,0.441737081903227,0.734944795289724,0.479227355091182,0.919218786610021,0,0.255374676170375,0.153606533256243,0.527545150920775,0.365950574409639,0,0,1.68828783009504,0.15279824777681,1.17851434189467,0.284743361598206,0.745597783301202,0.454357159999104,1.058001841495,0.289864488701678,0,0,0,0,0,0.561777680527007,1.53387290320252,0.519572009205738,0.35333957451034,0.14084341977668,1.28326477414318,0,0,0.432982082022428,1.01343946190039,0,0.34255163915718,1.03575153458869,0.148442139064825,0.346970653532272,0.304465478312141,0.691846491768175,0.753613202763113,0.352766121407114,0.376999773989026,0.247194967734374,0,0.884610551949874,0.647067399789637,0.662524555381181,0.484875253135222,0,0.878342391034642,0.628340120440365,0,0.718890747035522,0.599902730993408,2.28726408731516,0.599162557619291,0,0.376963056338593,0.695297280769106,0,0.20778804455956,0.486723789203273,0.916554274652847,1.24406970610093,0.758168275301024,0.210441855886474,1.30120442962704,0.689706313300419,0.360124259610698,1.05493372485001,0.884474488967262,1.0249097622788,1.03071897015702,0,1.5089759505299,1.51284864134255,0.351902248327898,1.09597866213787,0.834141747676794,1.0447564995665,0.61734640922383,0.995171334092466,2.1066395619397,2.31613116403244,1.42081749697796,2.27838349789052,1.17263029990548,0.720248245844059,1.42046841351126,0.393528463494808,0.154267112887378,0,0.536546802799238,0.116765342367169,0.493679549740441,0.32833492815819,0,0,0.219550115291051,0,0.630869845692382,0.411618449517138,0,0.528901133327089,0.853153002140936,1.85789337488351,0.902072229254653,1.00841762311671,0.444756087689741,0.190225626112559,0.474529061544512,0.494096864172033,0.251335208800269,0.596869416123452,0.19496408711912,0,0,0.199141273254367,1.70701110857774,1.14248512609729,1.1270773567308,2.03651327845314,1.16371492300575,0.49095073923223,0.822074982615345,0,0.156998727841375,0.123397163921801,0.296452627087149,2.66952169145751,1.96558995113203,3.37293168577281,1.42002084971952,1.92941727801933,0.25462585178142,2.01387296215567,0.162135226775035,1.09824565275233,0,0.372140947668503,0.624075346229121,0.505157755894224,0,0.482443521363367,0.554259570499814,1.70542270593436,2.11854469374634,1.35796068620151,0.469380496577004,0.670025029767263,0.238043640886014,0.585400943573396,0.788175720530955,0,0.159454768657487,0.163863314715738,0.518054945597687,1.01254341007058,0,1.08781136763742,0.491764273019036,0.275936746304732,0.160550589987792,0.234423373184406,0.491804836130026,0,2.2085575359138,0.390438744296638,0.430846795465598,0.955875191810208,1.11399337041197,0.849229592366497,1.21443210502468,0.292255857911312,0.790575555893047,0.321321316421807,0.283880170416537,1.24645922567079,0.162886959353576,0.659880491890142,0,1.94224508923985,2.11626489875326,0.754420319023592,0,0.307435147943927,0.516856586336442,0.363533729477506,0.712994756769443,0.632073515871632,0,0,0,1.08036656418786,0.776152102696527,2.35770738534752,0.532020700926821,1.07021290561242,0.329098041204242,0,1.64270195644597,0.42366414172764,0,0.49465875882444,0.645857706783622,0.904693873922338,0.596861720015682,0.328281799490123,0,0,0.683483523191411,1.44470807574256,0.925972636848558,1.50694765603753,1.77702496037333,1.83022538565218,0.509935289981566,0.559805809294632,0.138199973804424,0,1.26534397432454,1.62655573701479,1.18805874903981,0.627264888043406,1.74690050996942,0.269728692769641,0.661227645802687,0.26175594198403,0.1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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:19076 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:P33610 | |||
|association_with_transcript=-9bp_to_ENSMUST00000027312_5end | |||
|cluster_id=chr1:33726640..33726651,- | |||
|description=CAGE_peak_2_at_Prim2_5end | |||
|id=chr1:33726640..33726651,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000473!1.70e-07!14;UBERON:0003135!1.96e-07!15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,7.66e-10,14;UBERON:0003135,6.33e-09,15;UBERON:0004176,1.19e-08,17;UBERON:0009196,1.19e-08,17;UBERON:0009117,1.19e-08,17;UBERON:0003101,3.97e-08,16;UBERON:0000079,3.97e-08,16;UBERON:0000991,6.09e-08,18;UBERON:0005564,6.09e-08,18 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0.16787927191189,0.233612640595526,0.129123323441576,0,0,0,0.159544317990673,0,0.174840804837995,0.999329285446988,2.63217847606774,1.39912375625629,0.630924330716475,0.822686601634433,0,1.27564935226605,1.48936426801328,0.261199789138935,0.159992422793407,0.45881856213434,0,0,0.430942465371778,0,0.252030129759931,0.221730510655305,3.17515336729816,1.23012957516914,0,0.577703239502549,0.664938581433969,1.02084678131185,0,0.7813353445238,0,0,0.683045484958446,0,0.881277725829041,0.811015449756117,0,0.782391344348039,0.218025156380447,0.219686182734472,0.777719596297134,0.699932108126813,0,0.503347818173209,0.725362142011344,0,1.02903774414379,0.286533439938757,0.515672092277442,0.202316460859598,0.528990979272033,0.633831403506179,0.677689064138264,0,0,0,0,0.299600110518405,0.384218305321555,0.829516898467821,1.08004750665353,1.26194976810829,0.571301968807607,0.441737081903227,0.734944795289724,0.479227355091182,0.919218786610021,0,0.255374676170375,0.153606533256243,0.527545150920775,0.365950574409639,0,0,1.68828783009504,0.15279824777681,1.17851434189467,0.284743361598206,0.745597783301202,0.454357159999104,1.058001841495,0.289864488701678,0,0,0,0,0,0.561777680527007,1.53387290320252,0.519572009205738,0.35333957451034,0.14084341977668,1.28326477414318,0,0,0.432982082022428,1.01343946190039,0,0.34255163915718,1.03575153458869,0.148442139064825,0.346970653532272,0.304465478312141,0.691846491768175,0.753613202763113,0.352766121407114,0.376999773989026,0.247194967734374,0,0.884610551949874,0.647067399789637,0.662524555381181,0.484875253135222,0,0.878342391034642,0.628340120440365,0,0.718890747035522,0.599902730993408,2.28726408731516,0.599162557619291,0,0.376963056338593,0.695297280769106,0,0.20778804455956,0.486723789203273,0.916554274652847,1.24406970610093,0.758168275301024,0.210441855886474,1.30120442962704,0.689706313300419,0.360124259610698,1.05493372485001,0.884474488967262,1.0249097622788,1.03071897015702,0,1.5089759505299,1.51284864134255,0.351902248327898,1.09597866213787,0.834141747676794,1.0447564995665,0.61734640922383,0.995171334092466,2.1066395619397,2.31613116403244,1.42081749697796,2.27838349789052,1.17263029990548,0.720248245844059,1.42046841351126,0.393528463494808,0.154267112887378,0,0.536546802799238,0.116765342367169,0.493679549740441,0.32833492815819,0,0,0.219550115291051,0,0.630869845692382,0.411618449517138,0,0.528901133327089,0.853153002140936,1.85789337488351,0.902072229254653,1.00841762311671,0.444756087689741,0.190225626112559,0.474529061544512,0.494096864172033,0.251335208800269,0.596869416123452,0.19496408711912,0,0,0.199141273254367,1.70701110857774,1.14248512609729,1.1270773567308,2.03651327845314,1.16371492300575,0.49095073923223,0.822074982615345,0,0.156998727841375,0.123397163921801,0.296452627087149,2.66952169145751,1.96558995113203,3.37293168577281,1.42002084971952,1.92941727801933,0.25462585178142,2.01387296215567,0.162135226775035,1.09824565275233,0,0.372140947668503,0.624075346229121,0.505157755894224,0,0.482443521363367,0.554259570499814,1.70542270593436,2.11854469374634,1.35796068620151,0.469380496577004,0.670025029767263,0.238043640886014,0.585400943573396,0.788175720530955,0,0.159454768657487,0.163863314715738,0.518054945597687,1.01254341007058,0,1.08781136763742,0.491764273019036,0.275936746304732,0.160550589987792,0.234423373184406,0.491804836130026,0,2.2085575359138,0.390438744296638,0.430846795465598,0.955875191810208,1.11399337041197,0.849229592366497,1.21443210502468,0.292255857911312,0.790575555893047,0.321321316421807,0.283880170416537,1.24645922567079,0.162886959353576,0.659880491890142,0,1.94224508923985,2.11626489875326,0.754420319023592,0,0.307435147943927,0.516856586336442,0.363533729477506,0.712994756769443,0.632073515871632,0,0,0,1.08036656418786,0.776152102696527,2.35770738534752,0.532020700926821,1.07021290561242,0.329098041204242,0,1.64270195644597,0.42366414172764,0,0.49465875882444,0.645857706783622,0.904693873922338,0.596861720015682,0.328281799490123,0,0,0.683483523191411,1.44470807574256,0.925972636848558,1.50694765603753,1.77702496037333,1.83022538565218,0.509935289981566,0.559805809294632,0.138199973804424,0,1.26534397432454,1.62655573701479,1.18805874903981,0.627264888043406,1.74690050996942,0.269728692769641,0.661227645802687,0.26175594198403,0.129614973291793,0.621339313086926,1.69107881605257,1.79419855252775,3.14371131868485,2.33341426012857,1.54991788173277,2.19642963138012,1.40828686374905,1.69265700297135,2.72634295506848,2.89900944991207,2.30424005006292,0.948033361884535,0.810900861160657,1.02710957164827,1.94881234466693,1.43221356533985,1.98681354781265,1.68273629327956,1.62458479892035,1.41353029927407,1.37172251979,1.31074040677893,0.974578807397524,1.05833025804362,1.05189211963412,0,1.33191572024439,1.88399098879899,1.00730769818447,0,0.563047426353546,0.183151624267265,0.428736758158132,0.501572104035363,0.564751842617067,0,0.572895513439397,0.515559547031063,0,0,0,0.450321203224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| |||
|short_description=p2@Prim2 | |||
}} |
Revision as of 13:55, 5 August 2015
Short description: | p2@Prim2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Prim2_5end |
Coexpression cluster: | NA |
Association with transcript: | -9bp_to_ENSMUST00000027312_5end |
EntrezGene: | 19076 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
testis | 7.66e-10 | 14 |
male reproductive organ | 6.33e-09 | 15 |
external genitalia | 1.19e-08 | 17 |
indifferent external genitalia | 1.19e-08 | 17 |
indifferent gonad | 1.19e-08 | 17 |
male organism | 3.97e-08 | 16 |
male reproductive system | 3.97e-08 | 16 |
gonad | 6.09e-08 | 18 |
gonad primordium | 6.09e-08 | 18 |