FFCP PHASE1:Hg19::chr6:35182176..35182190,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=222663 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13655 | |||
|TSSclassifier=strong | |||
|UniProt=Q8IX30,Q8NAV8 | |||
|association_with_transcript=0bp_to_ENST00000394681,NM_152753,uc003okf.1,uc003okg.1_5end | |||
|coexpression_cluster_id=C519 | |||
|description=CAGE_peak_6_at_SCUBE3_5end | |||
|id=chr6:35182176..35182190,+ | |||
|ontology_enrichment_celltype=CL:0000055!9.57e-16!180;CL:0002334!9.13e-12!12;CL:0000057!1.88e-10!75;CL:0000499!7.02e-10!27;CL:0002620!1.07e-09!23;CL:0000327!6.44e-08!14;CL:0000153!7.20e-07!9;CL:0000447!7.20e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0002334;3.20e-21;12!CL:0002580;1.58e-11;3!CL:0000062;1.12e-08;9!CL:0002620;1.21e-07;23!CL:0002617;1.66e-07;2!CL:0002583;3.49e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002334,1.46e-21,12;CL:0002580,1.74e-11,3;CL:0000057,2.43e-08,76;CL:0002617,1.05e-07,2;CL:0002620,1.55e-07,23;CL:0002583,3.19e-07,2;CL:0000062,4.09e-07,11;CL:0000375,4.09e-07,11;CL:0000335,4.09e-07,11 | |||
|ontology_enrichment_development_v019=CL:0000335;4.85e-07;11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003688!2.40e-07!6;UBERON:0002358!2.40e-07!6;UBERON:0003684!2.40e-07!6;UBERON:0001178!2.40e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0000310;1.83e-08;10!UBERON:0001443;1.17e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000310,1.53e-08,10;UBERON:0001443,1.00e-07,11 | |||
|phase1_expression=2.54349730978779,1.71280419112787,0.422863212287913,4.00293193412522,0.893922188854576,0.872338524100369,0,0,0.261185628199839,0,0,0,0,0.618831764800233,1.65698687863958,0,1.20538905604795,0,0,0.369363174230364,0,0,0,0,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,3.00802746381534,0.579386075843295,3.1811437882044,0.973269740605272,0,0,0.087834785693126,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,4.96971951695318,0.25326102332916,0,0,0,0.560677600142307,0,0,0,0.134710672069688,0,0.605429710579726,0,0,0,0,0.597794722207204,0,0.161872944368132,0.280901613404497,0,0,0,0,0.247266929278557,0.910161361938026,0,0,0,0,0,0,0.150238058906597,0,2.15267562826634,0.213557388818567,0.211931901159562,1.50045548042201,0.721367704669072,0.772921620136887,0.37223371266318,1.18143432568886,1.36411807225678,1.51460264546469,0.276149695926898,0,4.26011511019937,1.30977727695932,1.01736355386293,0,0,0,0.121973706129595,0,0.116193942869518,0.310983165046111,0,0,0,0,2.76269842704961,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0.469634776943287,0,0.462985512576611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205654985406647,0,0,1.56983518083505,4.3596006883328,0.7333828582095,0.129271715757778,0,0.845302752556,0.797814349754612,1.04007436911366,1.02882949704857,0,1.5985330740966,0,0,0,0,0,0,0,0,0,0,0,0,1.67737398844108,0,0,8.39731578671959,0.205476322550383,0,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0.12269149171914,2.00068208423871,1.35632511849868,0.207970861530807,0,0,0,3.61135319673263,0,0,1.32845119707087,1.84369168541703,0.260650843404249,0.587403472388222,0,0,0,0,0,0,0.30239029332968,4.21783273291921,7.98002261097925,3.36792113319688,0.768834895534206,4.60536524160033,1.76939313257968,0,1.85051632563187,1.06537035187876,1.8067974323038,0.519254429183621,3.48631135379878,0,0,0,0.229628896329213,0.728364672026868,1.31124414959424,0,0,0,0,0,0,0,0,0,0.541892875087706,0.501689773854853,0,0,0,0,0,0,0,0,0,0.0915694648183434,0.41254749960294,0,0,0,1.35339005608971,1.07834031980251,0.460511024178389,0.827019434907183,0.429680979473094,0.580066775656914,0.596586391912706,0.356128142586949,0,0,0,0,0,0.31481234683064,0,0,0.532306030317022,0,0,0,0.372158369359667,0.316379424718726,0.190630193923825,0,0,0.318203247925937,0,0,0,0,0,0,0,0,0,0,1.09199929126389,0.141405431953713,1.13008116620243,0,0,1.31535265576129,0,0,0.202910376962704,0,0.281695602532241,0,0,0,0,0.211107635297664,0.987884678879706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.37969568277888,0,0,0,0,0,0,0,0,0.591860433821602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295547618953547,0.438770794307945,0,0,0.230850775511391,0,0,0,0.217294743844016,0,0.549585560411174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0.611030144933625,0,0,0,0,0,0,0,0,0,0.394584402849391,1.20990716048664,0,0.189559738885464,0.150323419414493,0,0,0,0,0,0,0,0.347119476670262,0,0,0.873633341210151,0,0,0,0,0,0,0,0,0,0.0633107959558787,0.195551382734803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.52076466412852,0,1.19807400299395,0.858452096273142,0.669514372325618,0.940568614814168,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.524545881349981,0,0,0,0,0.662091970365432,0,0.542999601753713,0.864221491201268,0.979762080328227,0,0.082092520749339,0,0,0,0,0,0.13223260174269,0,0,0,0.471612915298998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18628920882415,0,0,0,0.285465333544967,3.52898729547258,0,0,0.74627401443437,0.233713309847224,0,0,0.50313580350515,1.77962244319307,0,0,0,0,0,0,0.155262956876259,1.24411862352257,1.59505028734797,0,0,0,0,0.363697318405119,0,0,0.796191777397232,0,1.71697852591396,1.6837474438296,1.26184898228651,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.954013051960256,0,0,0,1.2249819094128,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,1.3807198521202,1.19349733269765,0.150420656698515,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0.496211178389294,0,0.255524855279191,0,0,0,0,0,0,0,0,0.0657727735628491,0,0.111231401892069,0.549451649953598,0,0,0,0,0,0.500335809236594,0.158013611732727,0,0.173858272302579,0.801711364730253,0,0,0,0.430227358820278,0,0.0852134047591577,0,0,0,0,0,0,0,0,0.205325613712494,0,0.485710993059139,0,3.58111395290463,0,0,0,0.452888530700021,0,0.218559560503957,0,0.980593287015622,0,0,0,0.4226557275834,5.26774055532232,0,0,0,0,0,0,0,0,0,0.315543124386369,0,0,0,0.371995018166751,0.924351257262837,0.865253124247578,0.378499274505237,0,0,0,0,0.275684698604535,0,0.151557396436479,0.535928260312357,0,0,0.213233981900981,0.714193294391221,0,0,0,2.16400338145761,2.82964064541507,0,0,0,0,0,0,0.213454691755431,0,0,2.34640942403454,0.122241444182866,0,0,0.402547587182052,0 | |||
|short_description=p6@SCUBE3 | |||
}} |
Revision as of 11:33, 22 January 2014
Short description: | p6@SCUBE3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_SCUBE3_5end |
Coexpression cluster: | C519_Preadipocyte_Ewing_Myoblast_spindle_Fibroblast_Adipocyte_Osteoblast |
Association with transcript: | 0bp_to_ENST00000394681, NM_152753, uc003okf.1, uc003okg.1_5end |
EntrezGene: | SCUBE3 |
HGNC: | 13655 |
UniProt: | Q8IX30Q8NAV8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte | 1.46e-21 | 12 |
preadipocyte of the breast | 1.74e-11 | 3 |
fibroblast | 2.43e-08 | 76 |
adipocyte of breast | 1.05e-07 | 2 |
skin fibroblast | 1.55e-07 | 23 |
subcutaneous preadipocyte | 3.19e-07 | 2 |
osteoblast | 4.09e-07 | 11 |
osteoprogenitor cell | 4.09e-07 | 11 |
mesenchyme condensation cell | 4.09e-07 | 11 |