FFCP PHASE1:Hg19::chr6:37615324..37615328,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=266727 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19267 | |||
|TSSclassifier=not | |||
|UniProt=Q5TFS7 | |||
|association_with_transcript=-224bp_to_uc003onv.1_5end | |||
|coexpression_cluster_id=C1331 | |||
|description=CAGE_peak_21_at_MDGA1_5end | |||
|id=chr6:37615324..37615328,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000047;6.30e-26;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.69e-07,8 | |||
|ontology_enrichment_development_v019=UBERON:0006215;8.69e-18;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001905!4.73e-28!2;UBERON:0002757!4.73e-28!2;UBERON:0010134!4.73e-28!2;UBERON:0002784!4.73e-28!2;UBERON:0005408!4.73e-28!2;UBERON:0001899!4.73e-28!2;UBERON:0001894!8.79e-18!7;UBERON:0006222!8.79e-18!7;UBERON:0003296!1.51e-14!4;UBERON:0010133!1.51e-14!4;UBERON:0001049!6.09e-14!57;UBERON:0005068!6.09e-14!57;UBERON:0006241!6.09e-14!57;UBERON:0007135!6.09e-14!57;UBERON:0002616!1.88e-13!59;UBERON:0000073!1.31e-12!94;UBERON:0001016!1.31e-12!94;UBERON:0001017!6.47e-12!82;UBERON:0005743!2.49e-11!86;UBERON:0000955!2.99e-11!69;UBERON:0006238!2.99e-11!69;UBERON:0002346!7.20e-11!90;UBERON:0004733!1.34e-10!12;UBERON:0002028!1.34e-10!12;UBERON:0007277!1.34e-10!12;UBERON:0004732!7.91e-10!13;UBERON:0000924!1.90e-09!173;UBERON:0006601!1.90e-09!173;UBERON:0003075!4.90e-09!86;UBERON:0007284!4.90e-09!86;UBERON:0003076!1.37e-08!15;UBERON:0003057!1.37e-08!15;UBERON:0004121!4.72e-08!169;UBERON:0001954!5.37e-08!2;UBERON:0003022!5.37e-08!2;UBERON:0002421!5.37e-08!2;UBERON:0002600!5.37e-08!2;UBERON:0002780!6.59e-08!41;UBERON:0001890!6.59e-08!41;UBERON:0006240!6.59e-08!41;UBERON:0002148!7.52e-08!2;UBERON:0009662!7.52e-08!2;UBERON:0001897!8.60e-08!2;UBERON:0003080!1.01e-07!42;UBERON:0002298!1.65e-07!8;UBERON:0002680!7.21e-07!9;UBERON:0001895!7.21e-07!9;UBERON:0010092!7.21e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;1.55e-98;2!UBERON:0002757;1.55e-98;2!UBERON:0010134;1.55e-98;2!UBERON:0005408;1.55e-98;2!UBERON:0001899;1.55e-98;2!UBERON:0003296;5.13e-50;4!UBERON:0010133;5.13e-50;4!UBERON:0002784;5.13e-50;4!UBERON:0001894;3.65e-29;7!UBERON:0002037;1.38e-09;6!UBERON:0002680;8.14e-07;9!UBERON:0001895;8.14e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,2.56e-98,2;UBERON:0002757,2.56e-98,2;UBERON:0010134,2.56e-98,2;UBERON:0005408,2.56e-98,2;UBERON:0001899,2.56e-98,2;UBERON:0003296,6.60e-50,4;UBERON:0010133,6.60e-50,4;UBERON:0002784,6.60e-50,4;UBERON:0001894,4.21e-29,7;UBERON:0006222,4.21e-29,7;UBERON:0001017,2.17e-10,81;UBERON:0002037,1.22e-09,6;UBERON:0006215,1.22e-09,6;UBERON:0001016,1.88e-09,89;UBERON:0000073,3.71e-09,53;UBERON:0002616,3.71e-09,53;UBERON:0001049,1.02e-08,56;UBERON:0005068,1.02e-08,56;UBERON:0006241,1.02e-08,56;UBERON:0007135,1.02e-08,56;UBERON:0000955,2.97e-07,68;UBERON:0006238,2.97e-07,68;UBERON:0002680,7.48e-07,9;UBERON:0001895,7.48e-07,9;UBERON:0010092,7.48e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291604613383254,0,0,0,0,1.76926815889959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221858103073705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0.252071696221718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07140367175657,1.3451348888753,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p21@MDGA1 | |||
}} |
Revision as of 11:45, 22 January 2014
Short description: | p21@MDGA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_21_at_MDGA1_5end |
Coexpression cluster: | C1331_cerebellum_pineal_Neural_medulla_parietal_hippocampus_optic |
Association with transcript: | -224bp_to_uc003onv.1_5end |
EntrezGene: | MDGA1 |
HGNC: | 19267 |
UniProt: | Q5TFS7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.69e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
pineal body | 2.56e-98 | 2 |
regional part of epithalamus | 2.56e-98 | 2 |
secretory circumventricular organ | 2.56e-98 | 2 |
circumventricular organ | 2.56e-98 | 2 |
epithalamus | 2.56e-98 | 2 |
gland of diencephalon | 6.60e-50 | 4 |
neuroendocrine gland | 6.60e-50 | 4 |
regional part of diencephalon | 6.60e-50 | 4 |
diencephalon | 4.21e-29 | 7 |
future diencephalon | 4.21e-29 | 7 |
central nervous system | 2.17e-10 | 81 |
cerebellum | 1.22e-09 | 6 |
rhombic lip | 1.22e-09 | 6 |
nervous system | 1.88e-09 | 89 |
regional part of nervous system | 3.71e-09 | 53 |
regional part of brain | 3.71e-09 | 53 |
neural tube | 1.02e-08 | 56 |
neural rod | 1.02e-08 | 56 |
future spinal cord | 1.02e-08 | 56 |
neural keel | 1.02e-08 | 56 |
brain | 2.97e-07 | 68 |
future brain | 2.97e-07 | 68 |
regional part of metencephalon | 7.48e-07 | 9 |
metencephalon | 7.48e-07 | 9 |
future metencephalon | 7.48e-07 | 9 |