FFCP PHASE1:Mm9::chr2:131937203..131937214,-: Difference between revisions
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{{FFCP|EntrezGene=54338|HGNC=|UniProt=A2ANL1|association_with_transcript=-19bp_to_ENSMUST00000128899_5end|description=CAGE_peak_3_at_Slc23a2_5end|id=chr2:131937203..131937214,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002476,2.11e-07,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!4.10e-08!63;UBERON:0000955!5.19e-08!50;UBERON:0006238!5.19e-08!50;UBERON:0002616!1.75e-07!49|ontology_enrichment_uberon_v019_2=UBERON:0002021,8.80e-12,10;UBERON:0000411,8.80e-12,10;UBERON:0001950,8.80e-12,10;UBERON:0000955,7.64e-11,47;UBERON:0006238,7.64e-11,47;UBERON:0002616,1.61e-09,46;UBERON:0000073,3.44e-09,54;UBERON:0003056,7.65e-09,49;UBERON:0002346,1.41e-08,64;UBERON:0003075,1.41e-08,64;UBERON:0007284,1.41e-08,64;UBERON:0001017,2.82e-08,73;UBERON:0002780,3.60e-08,39;UBERON:0001890,3.60e-08,39;UBERON:0006240,3.60e-08,39;UBERON:0001049,3.96e-08,52;UBERON:0005068,3.96e-08,52;UBERON:0006241,3.96e-08,52;UBERON:0007135,3.96e-08,52;UBERON:0001016,5.72e-08,75;UBERON:0003080,6.47e-08,40;UBERON:0004121,1.34e-07,95;UBERON:0000924,1.34e-07,95;UBERON:0006601,1.34e-07,95;UBERON:0010371,3.76e-07,73;UBERON:0000956,5.22e-07,21;UBERON:0001869,5.22e-07,21;UBERON:0000203,5.22e-07,21|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0.411343300817216,0.84877930359606,0.340173160604279,0.0992909512008853,0.261199789138935,0,0.45881856213434,0,0.430761996159075,0,0,0,0,0,0,0,0,0,0,0,0,0.523523743973798,0,0,0,0.251793635951155,0.202753862439029,0,7.04152209913235,0,0.219686182734472,0.194429899074283,1.95980990275508,0,0.838913030288682,0,0,0,0.286533439938757,0.515672092277442,0,0,0,0,0.889294796111139,0,0,0,0,0,0.103689612308478,0,0,0,0,0,0,0,3.30347642998166,0.255374676170375,0.46081959976873,0,0,0,0.279182999001381,0,0.30559649555362,0.294628585473668,0.142371680799103,0.186399445825301,0,0,0,0,0,0,0,0,0.140444420131752,3.57903677413921,1.81850203222008,1.41335829804136,0,0,0,0,0,0,0,0.22836775943812,0.517875767294343,0,0.346970653532272,0,0,0,0.117588707135705,0,0,0.289198713839823,0,0.161766849947409,0.220841518460394,0,0,0,0,0.255457055208591,0.11981512450592,0,0,0.898743836428936,0,0,1.91206752211504,2.55715457330331,0.41557608911912,0.811206315338788,0,0,0,6.10281382070775,0.130120442962704,0,0,0,0.272145996605311,0.2562274405697,0.0937017245597288,1.81092359517311,0,0,0,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233530684734339,0,0.164167464079095,0.0810688095458557,0,0,0.402619256281115,0.210289948564127,0.205809224758569,0,0,0,0,0.128867461322093,0,0,0,0,0.164698954724011,0,0,0,0,0,0.199141273254367,0,0,0,0.203651327845314,0.193952487167626,0,0,0,0.156998727841375,0,0,0,0,0,0,0.241177159752417,0,0,0.324270453550071,0.274561413188081,0,0,0.312037673114561,0,0,0,1.10851914099963,0,0,0,0,0.167506257441816,0.476087281772027,0.585400943573396,0.315270288212382,0.664394068946325,0.478364305972461,1.47476983244164,0.345369963731791,0.578596234326046,3.01582567878545,1.63171705145613,0.491764273019036,0.275936746304732,0.80275294993896,1.17211686592203,0.491804836130026,0,0,0,0,0,0,0,0,0,0,1.60660658210904,0,0,0,0,0,0,0,0,0.295301892880773,0,0,0.363533729477506,0,0,0,0,0,0,0.388076051348264,0.643011105094777,1.24138163549592,2.85390108163313,1.97458824722545,1.522324745573,0,0,0.220528398054962,0.32977250588296,0.484393280087717,0.120625849856312,0.954978752025092,0.984845398470368,0,0.927126510052548,0,0,0,0,0.136694227721025,0,1.35982743995084,0.839708713941948,0.967399816630967,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0.117357238645754,0.13020438484395,0.209718688851422,0,0,0,0,0.102710957164827,0.25984164595559,0,0,0,0,0.100966449948148,0.15241361331,0,0.194915761479505,0.0962118416403295,0.467507608726276,0,0,0,0,3.09103350451505,0,0,0,0,0,0.460325236507177,0,0.343706364687375,3.42541259885321,2.2661816921691,3.37511250115903,1.80128481289688,3.17199686288943,3.10656187051092,0,0,0,0.243106717068294,0.209613162627982,0,0,0.412070114477788,0.320919209591815,0.252697211763798,0.25347929989024,0.188626341386076,0,0,0,0,0.115884325944855,0,0,0,0.342869252385415,0.177475806159338,0.238436189947321,0.145346416632329,0,0.169229215783353,0.182927972872773,0,0.135804113845862,0,0,0.492522411877817,0,0,0,0.499621155875892,0.233931608445408,0.214871054048298,0.765153328275374,0,0|short_description=p3@Slc23a2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:54338 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:A2ANL1 | |||
|association_with_transcript=-19bp_to_ENSMUST00000128899_5end | |||
|cluster_id=chr2:131937203..131937214,- | |||
|description=CAGE_peak_3_at_Slc23a2_5end | |||
|id=chr2:131937203..131937214,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002476,2.11e-07,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!4.10e-08!63;UBERON:0000955!5.19e-08!50;UBERON:0006238!5.19e-08!50;UBERON:0002616!1.75e-07!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,8.80e-12,10;UBERON:0000411,8.80e-12,10;UBERON:0001950,8.80e-12,10;UBERON:0000955,7.64e-11,47;UBERON:0006238,7.64e-11,47;UBERON:0002616,1.61e-09,46;UBERON:0000073,3.44e-09,54;UBERON:0003056,7.65e-09,49;UBERON:0002346,1.41e-08,64;UBERON:0003075,1.41e-08,64;UBERON:0007284,1.41e-08,64;UBERON:0001017,2.82e-08,73;UBERON:0002780,3.60e-08,39;UBERON:0001890,3.60e-08,39;UBERON:0006240,3.60e-08,39;UBERON:0001049,3.96e-08,52;UBERON:0005068,3.96e-08,52;UBERON:0006241,3.96e-08,52;UBERON:0007135,3.96e-08,52;UBERON:0001016,5.72e-08,75;UBERON:0003080,6.47e-08,40;UBERON:0004121,1.34e-07,95;UBERON:0000924,1.34e-07,95;UBERON:0006601,1.34e-07,95;UBERON:0010371,3.76e-07,73;UBERON:0000956,5.22e-07,21;UBERON:0001869,5.22e-07,21;UBERON:0000203,5.22e-07,21 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0.411343300817216,0.84877930359606,0.340173160604279,0.0992909512008853,0.261199789138935,0,0.45881856213434,0,0.430761996159075,0,0,0,0,0,0,0,0,0,0,0,0,0.523523743973798,0,0,0,0.251793635951155,0.202753862439029,0,7.04152209913235,0,0.219686182734472,0.194429899074283,1.95980990275508,0,0.838913030288682,0,0,0,0.286533439938757,0.515672092277442,0,0,0,0,0.889294796111139,0,0,0,0,0,0.103689612308478,0,0,0,0,0,0,0,3.30347642998166,0.255374676170375,0.46081959976873,0,0,0,0.279182999001381,0,0.30559649555362,0.294628585473668,0.142371680799103,0.186399445825301,0,0,0,0,0,0,0,0,0.140444420131752,3.57903677413921,1.81850203222008,1.41335829804136,0,0,0,0,0,0,0,0.22836775943812,0.517875767294343,0,0.346970653532272,0,0,0,0.117588707135705,0,0,0.289198713839823,0,0.161766849947409,0.220841518460394,0,0,0,0,0.255457055208591,0.11981512450592,0,0,0.898743836428936,0,0,1.91206752211504,2.55715457330331,0.41557608911912,0.811206315338788,0,0,0,6.10281382070775,0.130120442962704,0,0,0,0.272145996605311,0.2562274405697,0.0937017245597288,1.81092359517311,0,0,0,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233530684734339,0,0.164167464079095,0.0810688095458557,0,0,0.402619256281115,0.210289948564127,0.205809224758569,0,0,0,0,0.128867461322093,0,0,0,0,0.164698954724011,0,0,0,0,0,0.199141273254367,0,0,0,0.203651327845314,0.193952487167626,0,0,0,0.156998727841375,0,0,0,0,0,0,0.241177159752417,0,0,0.324270453550071,0.274561413188081,0,0,0.312037673114561,0,0,0,1.10851914099963,0,0,0,0,0.167506257441816,0.476087281772027,0.585400943573396,0.315270288212382,0.664394068946325,0.478364305972461,1.47476983244164,0.345369963731791,0.578596234326046,3.01582567878545,1.63171705145613,0.491764273019036,0.275936746304732,0.80275294993896,1.17211686592203,0.491804836130026,0,0,0,0,0,0,0,0,0,0,1.60660658210904,0,0,0,0,0,0,0,0,0.295301892880773,0,0,0.363533729477506,0,0,0,0,0,0,0.388076051348264,0.643011105094777,1.24138163549592,2.85390108163313,1.97458824722545,1.522324745573,0,0,0.220528398054962,0.32977250588296,0.484393280087717,0.120625849856312,0.954978752025092,0.984845398470368,0,0.927126510052548,0,0,0,0,0.136694227721025,0,1.35982743995084,0.839708713941948,0.967399816630967,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0.117357238645754,0.13020438484395,0.209718688851422,0,0,0,0,0.102710957164827,0.25984164595559,0,0,0,0,0.100966449948148,0.15241361331,0,0.194915761479505,0.0962118416403295,0.467507608726276,0,0,0,0,3.09103350451505,0,0,0,0,0,0.460325236507177,0,0.343706364687375,3.42541259885321,2.2661816921691,3.37511250115903,1.80128481289688,3.17199686288943,3.10656187051092,0,0,0,0.243106717068294,0.209613162627982,0,0,0.412070114477788,0.320919209591815,0.252697211763798,0.25347929989024,0.188626341386076,0,0,0,0,0.115884325944855,0,0,0,0.342869252385415,0.177475806159338,0.238436189947321,0.145346416632329,0,0.169229215783353,0.182927972872773,0,0.135804113845862,0,0,0.492522411877817,0,0,0,0.499621155875892,0.233931608445408,0.214871054048298,0.765153328275374,0,0 | |||
|short_description=p3@Slc23a2 | |||
}} |
Revision as of 02:32, 4 August 2015
Short description: | p3@Slc23a2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Slc23a2_5end |
Coexpression cluster: | NA |
Association with transcript: | -19bp_to_ENSMUST00000128899_5end |
EntrezGene: | 54338 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow macrophage | 2.11e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
occipital lobe | 8.80e-12 | 10 |
visual cortex | 8.80e-12 | 10 |
neocortex | 8.80e-12 | 10 |
brain | 7.64e-11 | 47 |
future brain | 7.64e-11 | 47 |
regional part of brain | 1.61e-09 | 46 |
regional part of nervous system | 3.44e-09 | 54 |
pre-chordal neural plate | 7.65e-09 | 49 |
neurectoderm | 1.41e-08 | 64 |
neural plate | 1.41e-08 | 64 |
presumptive neural plate | 1.41e-08 | 64 |
central nervous system | 2.82e-08 | 73 |
regional part of forebrain | 3.60e-08 | 39 |
forebrain | 3.60e-08 | 39 |
future forebrain | 3.60e-08 | 39 |
neural tube | 3.96e-08 | 52 |
neural rod | 3.96e-08 | 52 |
future spinal cord | 3.96e-08 | 52 |
neural keel | 3.96e-08 | 52 |
nervous system | 5.72e-08 | 75 |
anterior neural tube | 6.47e-08 | 40 |
ectoderm-derived structure | 1.34e-07 | 95 |
ectoderm | 1.34e-07 | 95 |
presumptive ectoderm | 1.34e-07 | 95 |
ecto-epithelium | 3.76e-07 | 73 |
cerebral cortex | 5.22e-07 | 21 |
cerebral hemisphere | 5.22e-07 | 21 |
pallium | 5.22e-07 | 21 |