FFCP PHASE1:Hg19::chr7:141438118..141438209,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6742 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11317 | |||
|TSSclassifier=strong | |||
|UniProt=Q04837,C9K0U8,E7EUY5,A4D1U3 | |||
|association_with_transcript=0bp_to_ENST00000265304,ENST00000461433,ENST00000463093,ENST00000465167,ENST00000465582,ENST00000467681,ENST00000468267,ENST00000469123,ENST00000489378,ENST00000496622,ENST00000498107,NM_003143,uc003vwo.1,uc010lnp.1,uc011kri.1_5end | |||
|description=CAGE_peak_1_at_SSBP1_5end | |||
|id=chr7:141438118..141438209,+ | |||
|ontology_enrichment_celltype=CL:0000012!1.21e-25!682;CL:0000548!1.64e-24!679;CL:0000004!1.64e-24!679;CL:0000255!1.64e-24!679;CL:0000003!3.68e-20!722;CL:0000144!1.57e-13!625;CL:0000063!3.57e-09!578;CL:0002371!4.02e-09!591;CL:0000055!6.90e-08!180;CL:0000034!3.93e-07!444;CL:0002321!6.19e-07!248 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,6.05e-07,250;CL:0000034,8.89e-07,441 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!6.14e-23!239;DOID:162!4.36e-22!235;DOID:0050686!1.31e-12!137;DOID:0050687!1.04e-11!143;DOID:2531!5.09e-09!51;DOID:0060083!5.09e-09!51;DOID:305!4.61e-08!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:14566,6.14e-23,239;DOID:162,4.36e-22,235;DOID:0050686,1.31e-12,137;DOID:0050687,1.04e-11,143;DOID:2531,5.09e-09,51;DOID:0060083,5.09e-09,51;DOID:305,4.61e-08,106 | |||
|ontology_enrichment_uberon=UBERON:0000914!6.44e-07!83;UBERON:0002329!6.44e-07!83;UBERON:0003077!6.44e-07!83;UBERON:0003059!6.44e-07!83;UBERON:0007282!6.44e-07!83;UBERON:0009618!6.44e-07!83;UBERON:0007285!6.44e-07!83 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=131.171789833342,111.332272423311,130.523778192869,154.112879463821,128.724795195059,124.744408946353,172.243917154451,193.30628126861,115.444047664329,137.856738377346,39.0768654064559,93.7113486438439,68.8431813176264,208.793837443599,140.843884684364,211.110095985857,169.959856902761,228.587058291248,197.124850711365,139.003674568694,63.8522163594512,48.8989365505817,194.067999274856,147.003132528278,128.179035026294,163.601101706364,183.330616241729,184.891625305833,92.4406050594924,137.027095120705,81.5880969875721,196.75614203849,143.072811419669,123.497839395707,316.608448771693,249.080495317963,242.220362451249,70.9114122920803,59.1606120036918,49.0444567817825,96.0597384489275,97.4919934717128,88.8635708337944,74.4438982551371,74.0636849630067,76.4139792741621,72.2854304776679,77.2995629481032,86.4080774797339,93.5000275046989,89.4000865786561,153.476967197692,67.2254077436406,78.7491313972268,83.9644216884919,70.7791196680194,91.6964664194362,154.834480782663,88.1521610028199,121.632101261839,77.359792221684,78.1747581442517,78.1897537876797,79.7040283496138,87.3529808272038,119.71828240983,100.897204337283,85.6757948525495,94.9098911524766,137.914916387749,73.858739321271,128.160617323673,154.117182683711,164.990378609627,129.688622978677,182.822338883304,120.977935744775,131.254604343477,123.27652499666,162.742276676253,134.666590463784,160.561791159113,184.796056684389,168.210692268736,184.128415549756,154.049610346509,181.77977811435,197.714839344342,175.176891287988,171.729675816366,65.4594914475866,66.3578023989161,61.5459897281618,157.283881009041,168.713077457442,244.157046586496,108.387083332722,73.886023396843,62.0916526978518,164.511511464427,186.753458781047,196.480839379914,165.602719146725,139.151660649582,156.435736869139,169.694963251054,166.81518007925,120.53393186186,110.550445425896,118.888605028458,119.935907719058,156.203863211193,149.917715356843,184.335630553812,140.077601898669,161.579122686729,160.569386819205,166.315683613593,192.801005318861,192.413510251754,218.1129570419,218.603970223126,207.944239446404,225.256435631776,181.149553500902,174.50483475644,192.143951279525,106.851573909108,62.0461254217737,71.6880799219855,141.407982462098,175.052924382649,231.942687184164,262.76626378358,135.862573782326,138.328425607587,125.655179634074,99.2735135417377,186.989868350526,159.645166173046,145.27873553643,78.4564662231299,52.8228168024186,92.6961106961074,103.206071182189,96.8161339383926,84.5612628899982,107.320780937404,147.574686981273,183.128548155476,172.923294409033,153.981992523996,133.649093118924,101.190121604398,169.058272792592,193.683101525808,149.222406107283,172.105561606773,163.2967145732,124.181347335693,209.068415579647,156.616053778014,107.387305321195,279.056277982514,139.344415035663,192.351614723908,149.312032796403,155.629066027951,124.186476347365,134.795723658674,121.46275622586,30.3094960102945,23.2668158488995,93.3241271585023,142.133978184861,199.569686383378,161.67160977294,107.850569401554,140.803347732748,129.516525632873,132.368754704834,129.253795370592,138.800121788296,162.326359843974,194.356202801902,118.815580701271,133.09663855488,111.302680121053,217.575573550733,198.524193897468,196.375566245067,205.980110621164,197.808738017857,219.524610875614,190.67999595207,189.287682977434,117.791390540373,123.552297157334,108.550181953286,90.1059748318646,38.8053796580769,246.107398600845,149.641749766869,145.181596513712,145.740570132438,151.711458920515,103.814498704458,298.553506077175,111.221574127094,149.917286950634,176.539273665915,125.738169259365,211.2576849388,136.034205144092,164.341184140794,138.734145102321,218.064017550763,143.382383770657,156.576877590551,190.903993103017,110.407983272667,211.7809104745,186.686212133847,193.840635722787,214.923943025578,197.034757032246,205.891615946757,246.902958382927,216.353121623043,160.77829632884,235.163033016086,283.952385360996,118.90164457066,135.723837958699,135.372222925431,111.448302727675,157.36972700397,235.31222527925,223.543299043563,237.636875465113,230.734990956168,231.170090182043,235.609724777319,240.404222449573,242.333509429802,253.933123584618,100.389141828952,22.4386838085513,92.1925785382336,45.572700529518,107.741779598556,100.248376101118,100.434284135839,180.558407660592,173.167721468704,257.866418878684,172.307948091542,186.586910407648,203.671698105964,182.491825407462,185.710734026885,89.4343915340437,180.414177531592,170.301764908388,210.513788764828,175.549600477466,167.600755552733,168.945687184323,97.9853453469501,109.886228748144,122.369852025436,142.040588939517,88.7328038863708,345.877847411207,240.886371837165,329.485325991306,229.448935164697,212.74404299222,143.385122007789,149.769624320367,109.620300346466,86.4558241805019,101.172207298707,80.5426725260304,154.172887341386,60.3541712382079,73.8469917423296,73.5611517897632,157.017581357975,144.16466776508,98.8959456901801,147.788769167185,134.711661269484,218.108062031505,166.50196989601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2,70.4458277568592,158.040266705494 | |||
|short_description=p1@SSBP1 | |||
}} |
Revision as of 19:43, 22 January 2014
Short description: | p1@SSBP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SSBP1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000265304, ENST00000461433, ENST00000463093, ENST00000465167, ENST00000465582, ENST00000467681, ENST00000468267, ENST00000469123, ENST00000489378, ENST00000496622, ENST00000498107, NM_003143, uc003vwo.1, uc010lnp.1, uc011kri.1_5end |
EntrezGene: | SSBP1 |
HGNC: | 11317 |
UniProt: | Q04837C9K0U8E7EUY5A4D1U3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 6.05e-07 | 250 |
stem cell | 8.89e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 6.14e-23 | 239 |
cancer | 4.36e-22 | 235 |
organ system cancer | 1.31e-12 | 137 |
cell type cancer | 1.04e-11 | 143 |
hematologic cancer | 5.09e-09 | 51 |
immune system cancer | 5.09e-09 | 51 |
carcinoma | 4.61e-08 | 106 |