FFCP PHASE1:Hg19::chr7:27213872..27213886,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3206 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5100 | |||
|TSSclassifier=strong | |||
|UniProt=Q5I0Y5 | |||
|association_with_transcript=27bp_to_ENST00000381834_5end | |||
|description=CAGE_peak_4_at_HOXA10_5end | |||
|id=chr7:27213872..27213886,- | |||
|ontology_enrichment_celltype=CL:0002620!6.96e-12!23;CL:1000507!1.03e-07!12;CL:1000494!1.03e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0000135;1.04e-09;3!CL:0000388;1.04e-09;3!CL:1000507;4.81e-08;10!CL:1000494;4.81e-08;10!CL:0000650;6.26e-08;2!CL:1000500;6.26e-08;2!CL:1000618;6.26e-08;2!CL:1001318;6.26e-08;2!CL:0002173;6.26e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000135,1.09e-09,3;CL:0000388,1.09e-09,3;CL:1000507,6.16e-08,10;CL:1000494,6.16e-08,10;CL:0000650,8.09e-08,2;CL:1000500,8.09e-08,2;CL:1000618,8.09e-08,2;CL:1001318,8.09e-08,2;CL:0002173,8.09e-08,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:8692;3.08e-08;31 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,1.25e-08,31 | |||
|ontology_enrichment_uberon=UBERON:0006554!9.26e-14!44;UBERON:0001008!2.85e-13!45;UBERON:0000489!5.23e-10!32;UBERON:0002113!5.36e-10!27;UBERON:0003918!5.36e-10!27;UBERON:0005095!5.36e-10!27;UBERON:0007687!5.36e-10!27;UBERON:0009773!1.03e-07!12;UBERON:0001231!1.03e-07!12;UBERON:0004810!1.03e-07!12;UBERON:0002199!1.40e-07!45;UBERON:0002416!1.40e-07!45;UBERON:0004905!3.73e-07!5;UBERON:0000982!3.73e-07!5;UBERON:0004770!3.73e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0007846;1.04e-09;3!UBERON:0000043;1.04e-09;3!UBERON:0007845;1.04e-09;3!UBERON:0004211;4.81e-08;10!UBERON:0009773;4.81e-08;10!UBERON:0001231;4.81e-08;10!UBERON:0004810;4.81e-08;10!UBERON:0003567;6.26e-08;2!UBERON:0003838;6.26e-08;2!UBERON:0003586;6.26e-08;2!UBERON:0005169;6.26e-08;2!UBERON:0002321;6.26e-08;2!UBERON:0005215;6.26e-08;2!UBERON:0002303;6.26e-08;2!UBERON:0002319;6.26e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,1.09e-09,3;UBERON:0000043,1.09e-09,3;UBERON:0007845,1.09e-09,3;UBERON:0004810,6.16e-08,10;UBERON:0003567,8.09e-08,2;UBERON:0003838,8.09e-08,2;UBERON:0003586,8.09e-08,2;UBERON:0005169,8.09e-08,2;UBERON:0002321,8.09e-08,2;UBERON:0005215,8.09e-08,2;UBERON:0002303,8.09e-08,2;UBERON:0002319,8.09e-08,2 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,2.53299878168311,0,1.04474251279935,0,0,0,0,0.866364470720326,2.31978163009541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30361867064741,0,0,0,0,0,1.17881167947941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267899184852239,0.22452937262617,0.112611480483322,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.538168907066586,1.06778694409284,0.423863802319124,0.900273288253207,0.618315175430633,1.54584324027377,0.930584281657949,0.506328996723799,0.68205903612839,2.01947019395292,1.47279837827679,0,1.42003837006646,1.5112814734146,1.01736355386293,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0.591534000199219,0.168584690078102,0,0.330881918197182,0.217879444092406,0,0.404493924480493,0.392442930250692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0,0.129271715757778,0,0,1.59562869950922,2.08014873822732,2.05765899409714,0,1.5985330740966,0,2.17048642156577,0,0,0,0.791951872933429,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,1.00034104211935,1.08506009479894,0,0,0,0,1.50473049863859,13.6444502433591,0,2.65690239414175,0.368738337083406,1.47702144595741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0.177561725313127,0.0821271560138091,0,0.116210378459959,0,0.200506470303285,0,0.68888668898764,0,0.262248829918848,0.451199612907412,0.385076685522074,3.13739907670742,1.46139224653261,0.633309773357254,0,0,0.431831832204279,0,3.52230368807009,2.00675909541941,0.254876273045038,0,1.11937377361089,0,0,0,0,0,0.103041011647722,0.457847324091717,0.495056999523528,0,0,0,0.193341436584244,0,0,0,1.28904293841928,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0.359744915166629,1.64722217841633,0.353437207037059,0,0,0,0,0,0,0.545999645631943,0.707027159768564,0,0,0,0,0,0,0.202910376962704,0.6196469961995,0,0.573645408816206,0.392996164052485,0.35667105148125,0.709522128141196,1.47775344708365,0.987884678879706,0,0,0,0,0,0,0,1.68471475667626,0,0.229723400206959,0,0,0,0,0,0,0,0,0.534120355637366,0.962479855263359,0,0,0,0,0,1.79621434289535,2.10655907145603,0.423347165447766,0,1.12318871245384,0.456469358066384,0,0,1.86220955581764,0.1605880751037,0,5.53600108997424,8.58763361889412,2.15068535015921,2.46043718681657,2.0021897005429,1.36771666781428,0,0,0,0,0,0,0.146508179271894,0,0,0.568272293612826,0,0,0,0,0,0,0,0,0,0.552567831062295,1.0077309914171,0,0,0,0,0,0.511572370226872,0.690503839458535,0,0,0,0,0,0,0,0,0,0,0,1.03423011972439,0.291604613383254,2.08349993919951,0,0,0,0,0,0,0,0,2.84715956464049,0,0,0,0,0,0.915975934018623,0,0,0,0,0,0,0,0,0,0,1.95879369790977,0,0,0,0.619202951523374,1.83309043480088,0,0,0,0,0,0,0,0,0,0,0,0,0,0.901940516486955,4.35490403868438,0,0,0,0,3.13070500632772,0,0,0,0.0870592065804026,0,0,0,0,0.0821154570532092,0,0,0,0,0,0,0,0,0,0,0,0,1.54435498075768,0,0,0,0.135904206073614,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315222829196793,2.09818352539992,0,0,0,0,0,0,2.17199840701485,0.864221491201268,0.979762080328227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1760712134779,0,0.612691153526923,0.655745261419609,0,0,0,0,0,0,0,0,0,0,0,0,0,0.28984205722165,0.447764408660622,0.233713309847224,0,0.757612021100357,0.754703705257725,0,0,0,0,0,0,0,0,0,0,0.521745061811734,0,0,0,0,0.107410557042488,0,0.398095888698616,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.533458648470704,0,0,0.184105950251841,0,0,0,0,0,0,0,0.212574920101683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198916222116275,0.225630985047772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0.444925607568277,1.02041020705668,0,0,0,0,0.47775168788705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.923965261706223,0,0,0,4.57586782871147,0.118920090777569,2.823652050974,0,0.754814217833368,0,0,18.8126918544609,0.980593287015622,0,0,0,0.8453114551668,0.169927114687817,0,0,0,0,0,0,0,0,0,0.788857810965923,0,0,0,1.48798007266701,1.38652688589425,1.29787968637137,0,0,0,0,0,0,0,0.833565680400634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.34640942403454,5.98983076496046,3.66206560484165,0,0,0 | |||
|short_description=p4@HOXA10 | |||
}} |
Revision as of 16:13, 22 January 2014
Short description: | p4@HOXA10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_HOXA10_5end |
Coexpression cluster: | NA |
Association with transcript: | 27bp_to_ENST00000381834_5end |
EntrezGene: | HOXA10 |
HGNC: | 5100 |
UniProt: | Q5I0Y5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibrocyte | 1.09e-09 | 3 |
tendon cell | 1.09e-09 | 3 |
kidney tubule cell | 6.16e-08 | 10 |
nephron tubule epithelial cell | 6.16e-08 | 10 |
mesangial cell | 8.09e-08 | 2 |
kidney interstitial cell | 8.09e-08 | 2 |
juxtaglomerular complex cell | 8.09e-08 | 2 |
renal interstitial pericyte | 8.09e-08 | 2 |
extraglomerular mesangial cell | 8.09e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
dense regular connective tissue | 1.09e-09 | 3 |
tendon | 1.09e-09 | 3 |
regular connective tissue | 1.09e-09 | 3 |
nephron tubule epithelium | 6.16e-08 | 10 |
abdomen connective tissue | 8.09e-08 | 2 |
abdominal segment connective tissue | 8.09e-08 | 2 |
trunk connective tissue | 8.09e-08 | 2 |
interstitial tissue | 8.09e-08 | 2 |
extraglomerular mesangium | 8.09e-08 | 2 |
kidney interstitium | 8.09e-08 | 2 |
juxtaglomerular apparatus | 8.09e-08 | 2 |
mesangium | 8.09e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 1.25e-08 | 31 |