FFCP PHASE1:Hg19::chr7:5568284..5568346,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=60 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=132 | |||
|TSSclassifier=not | |||
|UniProt=A4UCT3 | |||
|association_with_transcript=-187bp_to_EF036500_5end | |||
|coexpression_cluster_id=C1999 | |||
|description=CAGE_peak_4_at_ACTB_5end | |||
|id=chr7:5568284..5568346,- | |||
|ontology_enrichment_celltype=CL:0002371!6.31e-22!591;CL:0000144!2.92e-21!625;CL:0000548!1.84e-19!679;CL:0000004!1.84e-19!679;CL:0000255!1.84e-19!679;CL:0000012!9.52e-19!682;CL:0000003!5.12e-15!722;CL:0000222!5.00e-14!119;CL:0000220!5.21e-11!246;CL:0002321!9.94e-11!248;CL:0000393!1.29e-09!60;CL:0000211!1.29e-09!60;CL:0000055!1.60e-09!180;CL:0000183!1.73e-09!59;CL:0000723!2.72e-09!436;CL:0000048!4.98e-09!430;CL:0000192!5.86e-09!42;CL:0000514!5.86e-09!42;CL:0000680!1.17e-08!57;CL:0000056!1.17e-08!57;CL:0000355!1.17e-08!57;CL:0000187!1.69e-08!54;CL:0000034!1.72e-08!444;CL:0000063!3.77e-08!578;CL:0000359!1.69e-07!32 | |||
|ontology_enrichment_celltype_v019=CL:0000359;3.17e-07;32!CL:1000449;6.63e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,4.80e-14,121;CL:0002321,8.29e-11,250;CL:0000723,1.82e-09,433;CL:0000048,3.34e-09,427;CL:0000393,3.49e-09,61;CL:0000211,3.49e-09,61;CL:0000034,1.18e-08,441;CL:0000192,1.90e-08,43;CL:0000514,1.90e-08,43;CL:0000680,3.01e-08,58;CL:0000056,3.01e-08,58;CL:0000355,3.01e-08,58;CL:0000187,4.44e-08,55;CL:0000359,1.69e-07,32;CL:0000766,2.25e-07,72;CL:0002078,7.88e-07,45;CL:1000449,8.41e-07,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!1.24e-12!216;UBERON:0002049!3.47e-11!79;UBERON:0007798!3.47e-11!79;UBERON:0002204!4.27e-10!167;UBERON:0004535!8.95e-10!110;UBERON:0000055!1.02e-09!69;UBERON:0000486!5.51e-09!82;UBERON:0001009!1.29e-08!113;UBERON:0005256!1.48e-08!143;UBERON:0004290!1.68e-08!70;UBERON:0000914!2.42e-08!83;UBERON:0002329!2.42e-08!83;UBERON:0003077!2.42e-08!83;UBERON:0003059!2.42e-08!83;UBERON:0007282!2.42e-08!83;UBERON:0009618!2.42e-08!83;UBERON:0007285!2.42e-08!83;UBERON:0001981!2.43e-08!60;UBERON:0007500!2.43e-08!60;UBERON:0004537!2.43e-08!60;UBERON:0006965!2.43e-08!60;UBERON:0002385!4.16e-08!63;UBERON:0001015!4.16e-08!63;UBERON:0000383!4.16e-08!63;UBERON:0001637!5.82e-08!42;UBERON:0003509!5.82e-08!42;UBERON:0004572!5.82e-08!42;UBERON:0001134!8.74e-08!61;UBERON:0002036!8.74e-08!61;UBERON:0003082!8.74e-08!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;6.63e-07;15!UBERON:0004819;6.63e-07;15!UBERON:0001285;6.63e-07;15!UBERON:0007684;6.63e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003081,9.51e-12,203;UBERON:0000926,9.78e-12,315;UBERON:0004120,9.78e-12,315;UBERON:0006603,9.78e-12,315;UBERON:0002049,9.74e-11,78;UBERON:0007798,9.74e-11,78;UBERON:0007503,9.86e-11,78;UBERON:0002204,4.13e-10,167;UBERON:0004535,2.16e-09,109;UBERON:0000055,2.80e-09,68;UBERON:0000486,1.20e-08,83;UBERON:0001009,2.92e-08,112;UBERON:0002329,3.83e-08,71;UBERON:0003059,3.83e-08,71;UBERON:0007282,3.83e-08,71;UBERON:0004290,3.83e-08,71;UBERON:0009618,3.83e-08,71;UBERON:0007524,4.44e-08,73;UBERON:0001637,5.82e-08,42;UBERON:0003509,5.82e-08,42;UBERON:0004572,5.82e-08,42;UBERON:0007500,6.51e-08,59;UBERON:0001981,6.51e-08,59;UBERON:0004537,6.51e-08,59;UBERON:0006965,6.51e-08,59;UBERON:0003077,8.58e-08,72;UBERON:0007285,8.58e-08,72;UBERON:0002385,9.69e-08,64;UBERON:0001015,9.69e-08,64;UBERON:0000383,9.69e-08,64;UBERON:0001134,2.02e-07,62;UBERON:0002036,2.02e-07,62;UBERON:0003082,2.02e-07,62;UBERON:0005256,6.77e-07,122;UBERON:0003914,6.77e-07,117;UBERON:0004211,8.41e-07,15;UBERON:0009773,8.41e-07,15;UBERON:0001231,8.41e-07,15;UBERON:0001285,8.41e-07,15;UBERON:0007684,8.41e-07,15;UBERON:0004208,8.41e-07,15 | |||
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| |||
|short_description=p4@ACTB | |||
}} |
Revision as of 15:34, 22 January 2014
Short description: | p4@ACTB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ACTB_5end |
Coexpression cluster: | C1999_Neutrophils_Alveolar_Olfactory_Smooth_Monocytederived_Renal_Dendritic |
Association with transcript: | -187bp_to_EF036500_5end |
EntrezGene: | ACTB |
HGNC: | 132 |
UniProt: | A4UCT3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 4.80e-14 | 121 |
embryonic cell | 8.29e-11 | 250 |
somatic stem cell | 1.82e-09 | 433 |
multi fate stem cell | 3.34e-09 | 427 |
electrically responsive cell | 3.49e-09 | 61 |
electrically active cell | 3.49e-09 | 61 |
stem cell | 1.18e-08 | 441 |
smooth muscle cell | 1.90e-08 | 43 |
smooth muscle myoblast | 1.90e-08 | 43 |
muscle precursor cell | 3.01e-08 | 58 |
myoblast | 3.01e-08 | 58 |
multi-potent skeletal muscle stem cell | 3.01e-08 | 58 |
muscle cell | 4.44e-08 | 55 |
vascular associated smooth muscle cell | 1.69e-07 | 32 |
myeloid leukocyte | 2.25e-07 | 72 |
meso-epithelial cell | 7.88e-07 | 45 |
epithelial cell of nephron | 8.41e-07 | 15 |