FFCP PHASE1:Hg19::chr7:5569401..5569420,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=60 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=132 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-77bp_to_uc003sos.3_5end | |||
|description=CAGE_peak_15_at_ACTB_5end | |||
|id=chr7:5569401..5569420,- | |||
|ontology_enrichment_celltype=CL:0000548!9.44e-35!679;CL:0000004!9.44e-35!679;CL:0000255!9.44e-35!679;CL:0000012!2.62e-33!682;CL:0000222!1.72e-30!119;CL:0000144!2.37e-27!625;CL:0000055!1.11e-26!180;CL:0002371!2.01e-26!591;CL:0000003!6.98e-26!722;CL:0000220!1.37e-19!246;CL:0002321!2.15e-19!248;CL:0000183!5.04e-17!59;CL:0000192!8.36e-16!42;CL:0000514!8.36e-16!42;CL:0000680!1.58e-15!57;CL:0000056!1.58e-15!57;CL:0000355!1.58e-15!57;CL:0000187!9.11e-15!54;CL:0000213!1.32e-14!57;CL:0000215!1.32e-14!57;CL:0000359!3.22e-14!32;CL:0002139!7.21e-13!24;CL:0000115!1.09e-12!35;CL:0000393!1.09e-12!60;CL:0000211!1.09e-12!60;CL:0002078!3.14e-12!44;CL:0000063!1.31e-11!578;CL:0000071!6.34e-11!18;CL:0002546!6.34e-11!18;CL:0000057!1.49e-10!75;CL:0000066!1.71e-08!254;CL:0000048!4.56e-07!430;CL:0000076!6.23e-07!62;CL:0000723!6.45e-07!436;CL:1000449!7.46e-07!16 | |||
|ontology_enrichment_celltype_v019=CL:0000359;3.54e-14;32!CL:0002139;7.91e-14;24!CL:0000115;1.04e-12;36!CL:0000192;6.11e-12;43!CL:0000071;1.30e-11;18!CL:0000213;3.77e-10;58!CL:0000215;3.77e-10;58!CL:0002078;8.16e-09;45!CL:0000187;2.26e-08;55!CL:1000449;1.66e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,2.76e-33,121;CL:0002321,5.57e-20,250;CL:0000192,9.69e-17,43;CL:0000514,9.69e-17,43;CL:0000680,1.52e-16,58;CL:0000056,1.52e-16,58;CL:0000355,1.52e-16,58;CL:0000213,3.85e-16,58;CL:0000215,3.85e-16,58;CL:0000187,1.00e-15,55;CL:0000359,3.80e-15,32;CL:0000115,6.44e-15,36;CL:0002139,1.07e-13,24;CL:0002078,1.40e-13,45;CL:0000393,1.60e-13,61;CL:0000211,1.60e-13,61;CL:0000071,1.31e-11,18;CL:0002546,1.31e-11,18;CL:0000057,1.45e-11,76;CL:0000048,1.56e-07,427;CL:0000066,1.86e-07,253;CL:0000723,2.13e-07,433;CL:0000076,2.17e-07,63;CL:1000449,2.25e-07,15;CL:0000034,9.35e-07,441 | |||
|ontology_enrichment_development_v019=CL:0000514;6.11e-12;43!CL:0002546;1.30e-11;18!CL:0000222;4.03e-10;121!CL:0000355;9.62e-09;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!1.27e-25!79;UBERON:0007798!1.27e-25!79;UBERON:0000055!8.05e-23!69;UBERON:0001981!1.55e-20!60;UBERON:0007500!1.55e-20!60;UBERON:0004537!1.55e-20!60;UBERON:0006965!1.55e-20!60;UBERON:0004872!1.48e-19!84;UBERON:0004535!6.12e-19!110;UBERON:0003914!1.67e-18!118;UBERON:0001637!1.25e-17!42;UBERON:0003509!1.25e-17!42;UBERON:0004572!1.25e-17!42;UBERON:0001009!3.84e-17!113;UBERON:0000490!7.24e-16!138;UBERON:0005256!2.61e-15!143;UBERON:0004290!6.47e-15!70;UBERON:0000914!7.93e-15!83;UBERON:0002329!7.93e-15!83;UBERON:0003077!7.93e-15!83;UBERON:0003059!7.93e-15!83;UBERON:0007282!7.93e-15!83;UBERON:0009618!7.93e-15!83;UBERON:0007285!7.93e-15!83;UBERON:0000486!4.10e-14!82;UBERON:0001134!1.66e-13!61;UBERON:0002036!1.66e-13!61;UBERON:0003082!1.66e-13!61;UBERON:0002100!4.09e-13!216;UBERON:0004573!8.69e-13!33;UBERON:0004571!8.69e-13!33;UBERON:0002385!1.12e-12!63;UBERON:0001015!1.12e-12!63;UBERON:0000383!1.12e-12!63;UBERON:0001986!6.34e-11!18;UBERON:0004638!6.34e-11!18;UBERON:0004852!6.34e-11!18;UBERON:0000926!1.26e-09!448;UBERON:0004120!1.26e-09!448;UBERON:0006603!1.26e-09!448;UBERON:0000487!1.95e-09!22;UBERON:0003081!1.34e-08!216;UBERON:0006914!2.76e-08!25;UBERON:0000947!6.25e-08!21;UBERON:0010191!6.25e-08!21;UBERON:0003104!1.07e-07!238;UBERON:0009142!1.07e-07!238;UBERON:0000353!4.42e-07!17;UBERON:0004211!7.46e-07!16;UBERON:0001285!7.46e-07!16;UBERON:0007684!7.46e-07!16;UBERON:0003220!7.46e-07!16;UBERON:0004208!7.46e-07!16 | |||
|ontology_enrichment_uberon_v019=UBERON:0007500;3.67e-14;56!UBERON:0001981;3.67e-14;56!UBERON:0004537;3.67e-14;56!UBERON:0001637;3.04e-13;42!UBERON:0003509;3.04e-13;42!UBERON:0004572;3.04e-13;42!UBERON:0000055;9.81e-13;65!UBERON:0003914;2.30e-12;74!UBERON:0002049;4.31e-12;75!UBERON:0007798;4.31e-12;75!UBERON:0004573;7.15e-12;33!UBERON:0004571;7.15e-12;33!UBERON:0004638;1.30e-11;18!UBERON:0001986;1.30e-11;18!UBERON:0004852;1.30e-11;18!UBERON:0000487;8.42e-10;22!UBERON:0000947;4.29e-08;21!UBERON:0010191;4.29e-08;21!UBERON:0000490;5.85e-08;33!UBERON:0006914;8.14e-08;25!UBERON:0006555;1.66e-07;15!UBERON:0004819;1.66e-07;15!UBERON:0001285;1.66e-07;15!UBERON:0007684;1.66e-07;15!UBERON:0000353;2.32e-07;15!UBERON:0000025;3.33e-07;93!UBERON:0001851;9.05e-07;15 | |||
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| |||
|short_description=p15@ACTB | |||
}} |
Revision as of 15:34, 22 January 2014
Short description: | p15@ACTB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_ACTB_5end |
Coexpression cluster: | NA |
Association with transcript: | -77bp_to_uc003sos.3_5end |
EntrezGene: | ACTB |
HGNC: | 132 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 2.76e-33 | 121 |
embryonic cell | 5.57e-20 | 250 |
smooth muscle cell | 9.69e-17 | 43 |
smooth muscle myoblast | 9.69e-17 | 43 |
muscle precursor cell | 1.52e-16 | 58 |
myoblast | 1.52e-16 | 58 |
multi-potent skeletal muscle stem cell | 1.52e-16 | 58 |
lining cell | 3.85e-16 | 58 |
barrier cell | 3.85e-16 | 58 |
muscle cell | 1.00e-15 | 55 |
vascular associated smooth muscle cell | 3.80e-15 | 32 |
endothelial cell | 6.44e-15 | 36 |
endothelial cell of vascular tree | 1.07e-13 | 24 |
meso-epithelial cell | 1.40e-13 | 45 |
electrically responsive cell | 1.60e-13 | 61 |
electrically active cell | 1.60e-13 | 61 |
blood vessel endothelial cell | 1.31e-11 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.31e-11 | 18 |
fibroblast | 1.45e-11 | 76 |
multi fate stem cell | 1.56e-07 | 427 |
epithelial cell | 1.86e-07 | 253 |
somatic stem cell | 2.13e-07 | 433 |
squamous epithelial cell | 2.17e-07 | 63 |
epithelial cell of nephron | 2.25e-07 | 15 |
stem cell | 9.35e-07 | 441 |