FFCP PHASE1:Hg19::chr8:110535062..110535067,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=93035 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20313 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=10bp_to_ENST00000534623_5end | |||
|coexpression_cluster_id=C995 | |||
|description=CAGE_peak_4_at_PKHD1L1_5end | |||
|id=chr8:110535062..110535067,+ | |||
|ontology_enrichment_celltype=CL:0000945!1.20e-91!24;CL:0000826!1.20e-91!24;CL:0000236!5.94e-48!14;CL:0000542!2.04e-43!53;CL:0000051!2.04e-43!53;CL:0000838!5.92e-40!52;CL:0002087!2.05e-18!119;CL:0002031!1.11e-15!124;CL:0000738!5.83e-15!140;CL:0000785!2.10e-12!2;CL:0000955!2.10e-12!2;CL:0000818!2.10e-12!2;CL:0000954!2.10e-12!2;CL:0000816!2.10e-12!2;CL:0002032!5.42e-12!165;CL:0000837!5.42e-12!165;CL:0000037!2.57e-11!172;CL:0000566!2.57e-11!172;CL:0000988!1.93e-10!182;CL:0000817!1.49e-08!3;CL:0000946!3.57e-07!1;CL:0000786!3.57e-07!1;CL:0000980!3.57e-07!1;CL:0000819!6.76e-07!1 | |||
|ontology_enrichment_celltype_v019=CL:0000945;5.98e-90;24!CL:0000236;6.15e-42;13!CL:0000542;2.51e-31;53!CL:0000946;1.65e-16;1!CL:0000786;1.65e-16;1!CL:0002087;9.21e-08;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,6.50e-90,24;CL:0000826,6.50e-90,24;CL:0000236,1.06e-52,14;CL:0000542,2.06e-47,53;CL:0000051,2.06e-47,53;CL:0000838,4.22e-41,52;CL:0002087,3.64e-21,115;CL:0000738,9.17e-18,136;CL:0002031,3.98e-17,120;CL:0000946,1.93e-16,1;CL:0000786,1.93e-16,1;CL:0000980,1.93e-16,1;CL:0002032,7.41e-15,161;CL:0000837,7.41e-15,161;CL:0000037,3.40e-14,168;CL:0000988,2.02e-13,177;CL:0000785,6.94e-09,2;CL:0000955,6.94e-09,2;CL:0000818,6.94e-09,2;CL:0000954,6.94e-09,2;CL:0000816,6.94e-09,2 | |||
|ontology_enrichment_development_v019=CL:0000051;2.51e-31;53!CL:0000954;6.42e-09;2 | |||
|ontology_enrichment_disease=DOID:0060058!1.21e-19!10;DOID:12603!3.17e-07!1;DOID:630!5.37e-07!1;DOID:0050177!5.37e-07!1;DOID:0050427!5.37e-07!1;DOID:0060073!6.76e-07!1;DOID:8675!6.76e-07!1;DOID:2355!8.49e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:12603;1.65e-16;1!DOID:0060058;5.26e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:12603,1.41e-16,1;DOID:0060058,5.94e-07,10 | |||
|ontology_enrichment_uberon=UBERON:0002106!1.13e-16!3;UBERON:0004854!1.13e-16!3;UBERON:0009034!1.13e-16!3;UBERON:0002095!1.13e-16!3;UBERON:0004782!1.13e-16!3;UBERON:0003281!1.13e-16!3;UBERON:0009664!1.13e-16!3;UBERON:0002296!1.13e-16!3;UBERON:0005602!1.13e-16!3;UBERON:0001179!1.13e-16!3;UBERON:0006293!1.13e-16!3;UBERON:0004177!1.95e-07!7;UBERON:0001154!4.78e-07!1;UBERON:0001153!4.78e-07!1;UBERON:0001736!8.02e-07!1;UBERON:0006298!8.02e-07!1 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.13957536094264,1.88831355734875,2.2826126580967,0,0,0,0,0,0,1.08454080812422,0.568676929949686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09227722252426,0,2.13365111283254,1.20118796110804,2.29900975981793,0.661044872784862,0.954053754535364,0.569212969109448,1.76171156811282,1.91136614062614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0,0,0,0,0,0,0,0,0,1.67222857613147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.828851746593443,0,0,0.492339221844278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0,0,0,0.547364367646998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423366660328922,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58330377895165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26757386311357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0,0,0,0,0,0,0,0,0.281951753939561,0.128915775947154,0.199882311849858,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202056159043763,0,0,0,0,0,0,0,0,0,0,0.402547587182052,0.641136984606466 | |||
|short_description=p4@PKHD1L1 | |||
}} |
Revision as of 23:22, 22 January 2014
Short description: | p4@PKHD1L1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_PKHD1L1_5end |
Coexpression cluster: | C995_B_plasma_lymphoma_xeroderma_acute_Burkitt_b |
Association with transcript: | 10bp_to_ENST00000534623_5end |
EntrezGene: | PKHD1L1 |
HGNC: | 20313 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 6.50e-90 | 24 |
pro-B cell | 6.50e-90 | 24 |
B cell | 1.06e-52 | 14 |
lymphocyte | 2.06e-47 | 53 |
common lymphoid progenitor | 2.06e-47 | 53 |
lymphoid lineage restricted progenitor cell | 4.22e-41 | 52 |
nongranular leukocyte | 3.64e-21 | 115 |
leukocyte | 9.17e-18 | 136 |
hematopoietic lineage restricted progenitor cell | 3.98e-17 | 120 |
antibody secreting cell | 1.93e-16 | 1 |
plasma cell | 1.93e-16 | 1 |
plasmablast | 1.93e-16 | 1 |
hematopoietic oligopotent progenitor cell | 7.41e-15 | 161 |
hematopoietic multipotent progenitor cell | 7.41e-15 | 161 |
hematopoietic stem cell | 3.40e-14 | 168 |
hematopoietic cell | 2.02e-13 | 177 |
mature B cell | 6.94e-09 | 2 |
pre-B-II cell | 6.94e-09 | 2 |
transitional stage B cell | 6.94e-09 | 2 |
small pre-B-II cell | 6.94e-09 | 2 |
immature B cell | 6.94e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
acute leukemia | 1.41e-16 | 1 |
lymphoma | 5.94e-07 | 10 |