FFCP PHASE1:Hg19::chr8:132053777..132053790,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C2121 | |||
|description=CAGE_peak_at_chr8:132053777..132053790,- | |||
|id=chr8:132053777..132053790,- | |||
|ontology_enrichment_celltype=CL:0000047!5.15e-09!8;CL:0002319!2.91e-08!25;CL:0000540!9.61e-07!6;CL:0000031!9.61e-07!6;CL:0000404!9.61e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002322;8.26e-10;5!CL:0002321;6.23e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,8.77e-10,5;CL:0000047,3.84e-08,8 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.68e-17;82!UBERON:0006241;2.63e-08;3!UBERON:0003057;2.63e-08;3!UBERON:0006215;2.11e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!4.54e-64!82;UBERON:0005743!9.51e-64!86;UBERON:0000073!2.22e-62!94;UBERON:0001016!2.22e-62!94;UBERON:0001049!3.91e-59!57;UBERON:0005068!3.91e-59!57;UBERON:0006241!3.91e-59!57;UBERON:0007135!3.91e-59!57;UBERON:0002616!1.19e-52!59;UBERON:0003075!1.27e-50!86;UBERON:0007284!1.27e-50!86;UBERON:0000955!5.79e-50!69;UBERON:0006238!5.79e-50!69;UBERON:0002346!9.20e-49!90;UBERON:0002780!8.10e-42!41;UBERON:0001890!8.10e-42!41;UBERON:0006240!8.10e-42!41;UBERON:0003080!1.74e-40!42;UBERON:0007023!2.38e-39!115;UBERON:0003056!1.63e-38!61;UBERON:0002020!1.73e-38!34;UBERON:0003528!1.73e-38!34;UBERON:0001893!3.74e-38!34;UBERON:0004121!3.42e-37!169;UBERON:0002791!4.59e-37!33;UBERON:0000924!1.30e-36!173;UBERON:0006601!1.30e-36!173;UBERON:0000153!4.70e-36!129;UBERON:0007811!4.70e-36!129;UBERON:0001869!1.13e-35!32;UBERON:0000033!2.31e-35!123;UBERON:0002619!3.42e-28!22;UBERON:0000956!8.79e-28!25;UBERON:0000203!8.79e-28!25;UBERON:0001950!1.55e-25!20;UBERON:0003076!2.66e-19!15;UBERON:0003057!2.66e-19!15;UBERON:0004732!3.66e-16!13;UBERON:0000475!1.16e-15!365;UBERON:0004733!3.18e-15!12;UBERON:0002028!3.18e-15!12;UBERON:0007277!3.18e-15!12;UBERON:0000922!2.24e-12!612;UBERON:0000119!3.50e-12!312;UBERON:0002308!4.65e-12!9;UBERON:0000125!4.65e-12!9;UBERON:0002420!5.86e-12!9;UBERON:0007245!5.86e-12!9;UBERON:0010009!5.86e-12!9;UBERON:0010011!5.86e-12!9;UBERON:0000454!5.86e-12!9;UBERON:0000483!1.44e-11!309;UBERON:0000025!2.04e-11!194;UBERON:0002680!2.43e-11!9;UBERON:0001895!2.43e-11!9;UBERON:0010092!2.43e-11!9;UBERON:0000468!7.64e-11!659;UBERON:0001871!2.12e-10!7;UBERON:0009663!1.79e-09!7;UBERON:0000923!2.28e-09!604;UBERON:0005291!2.28e-09!604;UBERON:0006598!2.28e-09!604;UBERON:0002532!2.28e-09!604;UBERON:0002050!2.73e-09!605;UBERON:0005423!2.73e-09!605;UBERON:0000477!3.36e-09!286;UBERON:0002298!4.83e-09!8;UBERON:0000481!5.69e-09!347;UBERON:0000064!6.23e-09!219;UBERON:0000467!1.20e-08!625;UBERON:0000480!1.42e-08!626;UBERON:0004111!2.12e-08!241;UBERON:0000200!3.48e-08!6;UBERON:0000062!4.96e-08!511;UBERON:0002021!8.13e-08!5;UBERON:0000349!8.24e-08!5;UBERON:0002037!1.59e-07!6;UBERON:0006215!1.59e-07!6;UBERON:0001872!2.97e-07!5;UBERON:0005174!5.48e-07!5;UBERON:0001137!5.48e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;5.79e-47;34!UBERON:0002020;5.79e-47;34!UBERON:0001893;1.50e-46;34!UBERON:0002791;2.62e-46;32!UBERON:0001869;3.33e-46;32!UBERON:0002619;9.76e-45;22!UBERON:0002780;1.76e-44;41!UBERON:0001890;1.76e-44;41!UBERON:0000073;2.18e-42;53!UBERON:0002616;2.18e-42;53!UBERON:0001950;2.01e-40;20!UBERON:0000956;9.87e-39;25!UBERON:0000203;9.87e-39;25!UBERON:0001017;2.75e-31;75!UBERON:0000955;8.43e-31;68!UBERON:0001016;1.27e-26;83!UBERON:0004732;7.80e-19;13!UBERON:0000125;1.61e-18;9!UBERON:0002308;1.61e-18;9!UBERON:0002420;2.53e-18;9!UBERON:0007245;2.53e-18;9!UBERON:0010009;2.53e-18;9!UBERON:0010011;2.53e-18;9!UBERON:0000454;2.53e-18;9!UBERON:0004733;2.46e-17;12!UBERON:0002028;2.46e-17;12!UBERON:0007023;3.53e-15;114!UBERON:0009663;2.52e-14;7!UBERON:0002298;3.05e-14;6!UBERON:0001871;5.06e-14;6!UBERON:0000200;2.74e-12;6!UBERON:0002021;1.18e-11;5!UBERON:0000349;1.25e-11;5!UBERON:0002680;2.20e-11;9!UBERON:0001895;2.20e-11;9!UBERON:0011216;7.81e-11;132!UBERON:0001872;8.46e-11;5!UBERON:0002784;5.31e-10;4!UBERON:0010314;1.11e-09;132!UBERON:0000369;1.52e-08;4!UBERON:0002435;1.52e-08;4!UBERON:0000204;1.52e-08;4!UBERON:0001894;2.62e-08;7!UBERON:0002240;2.63e-08;3!UBERON:0005174;2.63e-08;3!UBERON:0001137;2.63e-08;3!UBERON:0000488;2.83e-08;4!UBERON:0001896;5.33e-08;3!UBERON:0005290;5.33e-08;3!UBERON:0000988;6.46e-08;3!UBERON:0007625;8.64e-08;11!UBERON:0002104;3.14e-07;21!UBERON:0001870;5.95e-07;3!UBERON:0005383;7.86e-07;3!UBERON:0005382;7.86e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.59e-87,81;UBERON:0001049,6.14e-86,56;UBERON:0005068,6.14e-86,56;UBERON:0006241,6.14e-86,56;UBERON:0007135,6.14e-86,56;UBERON:0001016,1.64e-79,89;UBERON:0000073,4.47e-79,53;UBERON:0002616,4.47e-79,53;UBERON:0003075,3.60e-77,82;UBERON:0007284,3.60e-77,82;UBERON:0002346,8.14e-73,86;UBERON:0000955,1.13e-72,68;UBERON:0006238,1.13e-72,68;UBERON:0002780,3.54e-62,41;UBERON:0001890,3.54e-62,41;UBERON:0003080,3.54e-62,41;UBERON:0006240,3.54e-62,41;UBERON:0003056,4.80e-61,61;UBERON:0010371,2.42e-57,104;UBERON:0003528,6.69e-56,34;UBERON:0002020,6.69e-56,34;UBERON:0001893,2.21e-55,34;UBERON:0002791,1.23e-51,32;UBERON:0001869,2.14e-51,32;UBERON:0004121,1.64e-48,171;UBERON:0000924,1.64e-48,171;UBERON:0006601,1.64e-48,171;UBERON:0007023,6.98e-48,114;UBERON:0010314,5.14e-45,132;UBERON:0002619,1.07e-44,22;UBERON:0001950,2.19e-40,20;UBERON:0000956,1.07e-38,25;UBERON:0000203,1.07e-38,25;UBERON:0011216,3.70e-29,223;UBERON:0003076,1.18e-23,15;UBERON:0003057,1.18e-23,15;UBERON:0000025,1.59e-19,192;UBERON:0004732,8.16e-19,13;UBERON:0000125,1.60e-18,9;UBERON:0002308,1.60e-18,9;UBERON:0002420,2.33e-18,9;UBERON:0007245,2.33e-18,9;UBERON:0010009,2.33e-18,9;UBERON:0010011,2.33e-18,9;UBERON:0000454,2.33e-18,9;UBERON:0004733,2.73e-17,12;UBERON:0002028,2.73e-17,12;UBERON:0007277,2.73e-17,12;UBERON:0000119,3.99e-15,309;UBERON:0004111,4.03e-15,240;UBERON:0000483,1.02e-14,306;UBERON:0009663,2.42e-14,7;UBERON:0002298,3.15e-14,6;UBERON:0001871,5.38e-14,6;UBERON:0000200,2.89e-12,6;UBERON:0002021,1.13e-11,5;UBERON:0000349,1.16e-11,5;UBERON:0002680,2.43e-11,9;UBERON:0001895,2.43e-11,9;UBERON:0010092,2.43e-11,9;UBERON:0001872,9.10e-11,5;UBERON:0000922,1.04e-10,592;UBERON:0002784,5.20e-10,4;UBERON:0000923,5.18e-09,560;UBERON:0010316,5.18e-09,560;UBERON:0005291,5.18e-09,560;UBERON:0006598,5.18e-09,560;UBERON:0010317,5.18e-09,560;UBERON:0002532,5.18e-09,560;UBERON:0002050,8.45e-09,564;UBERON:0000369,1.44e-08,4;UBERON:0002435,1.44e-08,4;UBERON:0000204,1.44e-08,4;UBERON:0010082,1.44e-08,4;UBERON:0001894,2.54e-08,7;UBERON:0006222,2.54e-08,7;UBERON:0002240,2.63e-08,3;UBERON:0005174,2.63e-08,3;UBERON:0001137,2.63e-08,3;UBERON:0000488,2.98e-08,4;UBERON:0001896,5.34e-08,3;UBERON:0005290,5.34e-08,3;UBERON:0010096,5.34e-08,3;UBERON:0005423,6.27e-08,581;UBERON:0000988,6.68e-08,3;UBERON:0007625,9.59e-08,11;UBERON:0000970,3.31e-07,21;UBERON:0002104,3.31e-07,21;UBERON:0001870,5.54e-07,3;UBERON:0005383,7.71e-07,3;UBERON:0005382,7.71e-07,3 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0.245733936501509,2.79120467188971,0,0,0.37129905888014,0.331397375727916,0,0,0,0,0.492484232307152,1.02000345622126,0.626909442956176,0.286235987131057,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.34860158954712,4.43458794925128,5.79709585574632,1.37528029272598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300091096084402,0,0,0,0,0,0,0,0,0.355009592516614,0,0,0,0,0,4.02513230227665,1.45782745153634,7.43641234364918,4.97573064073778,7.31730467539322,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,7.72055146343365,0,0,0,0,0,0,7.21656710126366,1.04337364477569,1.52631302506568,0,0,0,0,0,0,0.234004265139238,0.445893486866185,0,0,0,0,0,0,0,0,0,0.288239906833923,0.37872730027914,0,0,0,0,0,0,0,0.112131084345361,4.79556075716608,0,0,3.57656445851882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.85273810081437,0.144781306667579,2.05476322550383,1.96967059563885,0,0,0,0,6.86055485400651,13.0139853857622,0.773288812777695,1.67516265334349,1.91381625495949,0,0,0,0.613457458595699,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0,0.321707842287215,0,0,0.355123450626254,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0.103041011647722,0,0,0,0,0,0,0.924291702687866,0.614014698904518,0,0.107420244868274,0.290033387828457,0.511359764496605,0,0,0,0,0,0,0,0,0,0,0,0,0,3.72158369359667,0,0.190630193923825,0,0.42793898803392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.578775534266688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.9005100120271,12.8009168933567,0.111308705022906,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0.197286811273867,0,0,18.4173221758092,6.02992638052033,17.9652418201075,0,0,0,0,0,0,0,0,0,13.2861207872076,5.90922549264499,13.7323562685375,8.73576153456674,10.9352619012813,5.48463492884931,0,0,0.230850775511391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.5929948726765,0,9.60484227473891,0,0,0,9.86461007123476,1.20990716048664,6.42752799424029,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0,56.6114405104178,0,0,0,0,0.0969890164884194,0,4.74559555639118,0,0.19871461170299,5.82459322794084,0,0,0,0,0,0,0,0,0,0,0,0,0,31.7845648891671,16.2113477951643,7.66670121795161,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,25.4473500738977,19.0684768556206,0.482259445395058,1.2378549293751,2.49264202817511,0,0,9.05168394204568,0,0.0788057072991982,0.419636705079985,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0,0,0,0,31.1571924831337,16.1323774126082,0,0,0.213574825135389,1.41483874589699,4.97086866416635,0,0,0,0,0,0,0,0,0,7.97461361970287,7.93170721862761,9.26412887228099,27.5236413931234,17.304932039749,18.8152100912392,0,0,0,0,0,0,0.144921028610825,0.149254802886874,0,0,0.378806010550178,0,0.889811221596536,0,1.51230923763239,0,0,0,4.94783423379965,0.310525913752519,0,0,0,0.150257608997218,0,0,0,0.107410557042488,5.10437135866343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.35988806297962,0,0,0,0,0,0,0,0,0,0,0.368211900503681,0,0,0.127894371303652,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,6.48715173474241,21.2544864488377,11.0147362749434,11.4865163974823,21.6781658750678,9.95864435484738,6.45902582527404,2.85538840518309,0,0,0,0,0,0,0,0.601682626794058,2.0170506870352,0,0,0,0,6.41607053874749,10.15401528198,9.30090584255328,6.72207588055412,9.29857175330973,0,0.496211178389294,0,0,32.1421101526972,12.7787814443153,0,0,0,0,0.342976018874837,14.0017649932273,7.1034595447877,0,0,0,3.14231179832004,0,0,0,0,2.57315559035963,0,0,0.173858272302579,0,0,0,0,15.48818491753,0.709992004383392,0.511280428554946,0,0.68732060563215,0,0,0,0,0,0,0.307988420568741,0,0,0,0,0,0,0,0,0,0,0,0,0,45.5435643706673,40.9924032451379,51.1413430375914,0,0,0.0644578879735772,0,0,0,0,0.730336388246517,7.79839781787719,12.0405249847219,0,7.54705541119153,13.0905207102113,0,0,0,0,0,0.109265571963696,0.506794004045748,0.101988829741982,0,0,0,2.65225443763838,1.33982065078089,36.4834553361863,13.5497224579083,1.91910583710883,0.476128862927481,0.129177819672012,0,0.224263725161227,0,0,0,0.342233301085281,0.0673520530145875,0.502055437748735,1.33064142618405,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr8:132053777..132053790,- | |||
}} |
Revision as of 23:54, 22 January 2014
Short description: | p@chr8:132053777..132053790, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:132053777..132053790, - |
Coexpression cluster: | C2121_spinal_epididymis_glioma_thalamus_locus_pineal_medulla |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 8.77e-10 | 5 |
neuronal stem cell | 3.84e-08 | 8 |