FFCP PHASE1:Hg19::chr8:22022699..22022730,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=649 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1067 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000397816,ENST00000520970_5end | |||
|description=CAGE_peak_2_at_BMP1_5end | |||
|id=chr8:22022699..22022730,+ | |||
|ontology_enrichment_celltype=CL:0000055!4.59e-19!180;CL:0000220!2.91e-18!246;CL:0002321!9.92e-18!248;CL:0000222!7.20e-11!119;CL:0000066!8.03e-11!254;CL:0000548!2.61e-10!679;CL:0000004!2.61e-10!679;CL:0000255!2.61e-10!679;CL:0000012!1.77e-09!682;CL:0000680!8.05e-09!57;CL:0000056!8.05e-09!57;CL:0000355!8.05e-09!57;CL:0000183!9.29e-09!59;CL:0000144!9.31e-09!625;CL:0000192!1.37e-08!42;CL:0000514!1.37e-08!42;CL:0000057!2.07e-08!75;CL:0000187!3.48e-08!54;CL:0000359!4.10e-08!32;CL:0002371!1.08e-07!591 | |||
|ontology_enrichment_celltype_v019=CL:0000349;1.89e-10;19!CL:0000359;4.90e-08;32!CL:0000134;9.75e-08;55!CL:0000048;4.21e-07;58!CL:0000192;7.68e-07;43!CL:0000723;7.80e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,3.13e-16,250;CL:0000222,1.74e-10,121;CL:0000349,1.99e-10,19;CL:0000680,3.24e-09,58;CL:0000056,3.24e-09,58;CL:0000355,3.24e-09,58;CL:0000192,4.66e-09,43;CL:0000514,4.66e-09,43;CL:0000066,5.81e-09,253;CL:0000187,1.53e-08,55;CL:0000359,2.15e-08,32;CL:0000057,7.01e-08,76;CL:0000393,5.90e-07,61;CL:0000211,5.90e-07,61 | |||
|ontology_enrichment_development_v019=CL:0000514;7.68e-07;43 | |||
|ontology_enrichment_disease=DOID:2394!5.21e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;2.04e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,2.31e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0005256!5.01e-12!143;UBERON:0002100!8.37e-11!216;UBERON:0000475!2.74e-10!365;UBERON:0000468!3.43e-10!659;UBERON:0000486!1.14e-09!82;UBERON:0003104!1.35e-09!238;UBERON:0009142!1.35e-09!238;UBERON:0003914!1.96e-09!118;UBERON:0005631!2.98e-09!14;UBERON:0000158!2.98e-09!14;UBERON:0004872!3.92e-09!84;UBERON:0002049!9.50e-09!79;UBERON:0007798!9.50e-09!79;UBERON:0000467!1.31e-08!625;UBERON:0000490!1.36e-08!138;UBERON:0000481!1.91e-08!347;UBERON:0000480!2.30e-08!626;UBERON:0000914!3.76e-08!83;UBERON:0002329!3.76e-08!83;UBERON:0003077!3.76e-08!83;UBERON:0003059!3.76e-08!83;UBERON:0007282!3.76e-08!83;UBERON:0009618!3.76e-08!83;UBERON:0007285!3.76e-08!83;UBERON:0001134!5.09e-08!61;UBERON:0002036!5.09e-08!61;UBERON:0003082!5.09e-08!61;UBERON:0002385!5.54e-08!63;UBERON:0001015!5.54e-08!63;UBERON:0000383!5.54e-08!63;UBERON:0000478!7.15e-08!24;UBERON:0001637!1.26e-07!42;UBERON:0003509!1.26e-07!42;UBERON:0004572!1.26e-07!42;UBERON:0000119!4.17e-07!312;UBERON:0000483!4.43e-07!309;UBERON:0004290!6.26e-07!70;UBERON:0004923!9.08e-07!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0000478;4.40e-08;24!UBERON:0005631;5.45e-07;10!UBERON:0000158;5.45e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003104,9.41e-10,160;UBERON:0009142,9.41e-10,160;UBERON:0005631,9.48e-10,14;UBERON:0000158,9.48e-10,14;UBERON:0000486,2.23e-09,83;UBERON:0005256,1.11e-08,122;UBERON:0003914,1.94e-08,117;UBERON:0001134,2.18e-08,62;UBERON:0002036,2.18e-08,62;UBERON:0003082,2.18e-08,62;UBERON:0004872,2.30e-08,83;UBERON:0002385,2.37e-08,64;UBERON:0001015,2.37e-08,64;UBERON:0000383,2.37e-08,64;UBERON:0000478,4.77e-08,24;UBERON:0002100,4.84e-08,199;UBERON:0007503,6.92e-08,78;UBERON:0002049,8.87e-08,78;UBERON:0007798,8.87e-08,78;UBERON:0001637,2.20e-07,42;UBERON:0003509,2.20e-07,42;UBERON:0004572,2.20e-07,42;UBERON:0004923,9.30e-07,66;UBERON:0002329,9.85e-07,71;UBERON:0003059,9.85e-07,71;UBERON:0007282,9.85e-07,71;UBERON:0004290,9.85e-07,71;UBERON:0009618,9.85e-07,71 | |||
|phase1_expression=11.082381135504,6.63711624062048,12.6858963686374,6.00439790118782,16.5375604938096,14.8297549097063,7.59899634504932,6.31719873426831,3.3954131665979,7.61775203154677,11.8626198555313,40.1932124719517,58.5562691667167,4.82688776544182,7.29074226601415,9.41255205032485,5.42425075221579,8.03341099426111,5.85519358548608,3.20114750999649,2.24400760368678,4.07491137921514,2.57612388417951,2.05311637609326,3.51519390865448,0,0,0.157421562627358,0,0,0.464448369948228,11.9524759182261,11.1446189947953,6.65557218300218,0.697204805222715,0.284338464974843,0,1.10799081706375,0,0,0.447830948479849,0,0.257575567634187,0,0.377875943688809,0.485168122375632,0.697287110717054,0.822335776043652,0.929119112685311,0.28769239232215,0.256160706529101,0,1.03423704220986,0.645484683583826,0,0.188242339542605,0.545812300115692,0.674170453335254,0.612167784741805,0,0,0.659702600373432,0,0.426224750532694,0.580418477257168,1.13477044938228,3.11411124497787,0.502497330513487,0.521482918420201,0.217188844705117,0.605399502633369,1.47311054395026,0.632924774881769,0,0,0,0,0.300353785683013,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289803085735052,0,0,0,0.226618685395132,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,4.02420515822182,7.67175371061182,9.03597880961416,7.52006865953834,6.80778639115871,22.2680065174308,31.1446316993687,4.72674085820339,11.3081992705908,5.35792192728069,1.44076983047484,8.01449634243593,8.89882662682631,0,0.174129737299267,0.132957960518865,0,0,0,0.39752481473341,2.58070378531837,0.694281003215189,5.08777147731609,1.67799774483962,1.37559020970034,3.76190939766259,1.55050055501597,1.77883131343355,0.66944122552934,1.20848795132744,1.52054421143703,1.95249646038536,0.735326160691737,4.86085168729056,0.535798369704479,1.34717623575702,0.563057402416611,3.06633274931766,1.89853131913626,1.28241220751285,0,0,20.4964204506991,40.7517000390161,6.58478660655815,16.8159659632788,22.6600930391563,5.32002573297536,11.7742296029885,16.0123493594557,35.7667945204882,1.24484414159907,5.79255889899659,2.94231425604226,6.65972681637698,7.49028701823999,1.64025002283658,0.312160076830321,1.1409436430889,0.597794722207204,0.587172493218824,0.323745888736263,0.842704840213491,0.816616685019573,0.737005903870608,1.96318984233954,2.37600571456411,5.68713937340681,10.0117749813183,14.3723628363248,1.5150250255866,1.37630371859161,0.554128230968366,4.82875382968922,3.67785354958824,7.96261712204963,4.8775838758809,12.5572744982203,7.26095121983129,5.51022943014861,13.2040082277137,2.57631323096097,11.0785432219621,5.76962254627928,17.2151858886092,4.87185025805993,7.32057945307932,2.66944706062668,9.86040946594752,12.4253357380815,4.93685281315437,3.56077243852024,27.2497802960249,34.3660111944452,16.0610573417842,0.365921118388786,0.397589304964456,0.232387885739037,0.932949495138334,0.504641701751257,0.36497735907583,14.0804579096834,3.85944562915731,2.76269842704961,4.64367928031979,2.88751792667834,4.73227200159376,4.55178663210875,3.37415441836875,4.41175890929576,4.35758888184812,4.74541238222193,4.31460186112526,6.08286541888573,3.8474715694639,2.21446636387394,12.6217596423101,20.57870056657,19.1111324801205,1.26755034821831,0.982827216677626,3.54473944008842,0,2.58275720940538,4.97546649865724,15.255289671799,6.74410519545717,4.02115889646523,3.79612625149971,1.3032332212413,1.03993478527958,4.3299402607582,2.78232971940184,29.4695822531912,3.03169540298255,3.70388410061289,1.90254152234598,0,0.858486162094873,0,0.702012795417713,0.148631162288728,4.68669169933885,30.2367830757947,14.7446101132082,3.85101647622248,1.45316969256981,7.66765358330422,0,0,0.207328115540772,0.144119953416961,0.25248486685276,1.71444314588856,2.29193055334967,5.86087236050235,6.84289784090821,1.95372236136315,2.70308752059526,8.57479297891735,2.01835951821649,3.92364061949952,0.8800594298514,9.82465039759111,3.57656445851882,6.762422020448,7.1803291477915,4.16029747645464,0.771622122786426,0,0.799266537048298,3.57444984145369,18.9917561887005,2.46972101034231,5.21177894869976,2.13235169245527,1.58390374586686,33.4597708536141,41.8336060128141,29.2920864163427,0,0,0,38.3399768786532,25.2696258835051,1.42636905040718,6.08081488003833,5.54786070886035,7.34149949283572,0.112085143993527,0,0,0,1.01637849688985,1.30139853857622,2.31986643833309,1.17261385734044,1.91381625495949,0.749007023947182,0,0,6.62534055283355,5.50187573165645,2.17012018959788,7.69492187663986,3.92543775353756,4.1002627908823,3.63138386477411,16.5520354850245,13.6444502433591,3.10419213877515,3.98535359121262,12.3527342922941,2.17209036170207,2.93701736194111,3.0882908142977,0,0,0,41.5284772881375,36.6157966923094,59.8732780792767,7.69134204238208,12.8908057561972,7.85848264412606,11.2762451345017,4.60536524160033,13.0291676126322,22.2627099667486,2.62156479464514,9.41077144159573,3.28508624055237,4.67328986265259,3.48631135379878,0.846016147141356,19.2486211491153,5.34069735828199,4.59257792658427,3.6418233601343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| |||
|short_description=p2@BMP1 | |||
}} |
Revision as of 21:02, 22 January 2014
Short description: | p2@BMP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_BMP1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000397816, ENST00000520970_5end |
EntrezGene: | BMP1 |
HGNC: | 1067 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 3.13e-16 | 250 |
mesodermal cell | 1.74e-10 | 121 |
extraembryonic cell | 1.99e-10 | 19 |
muscle precursor cell | 3.24e-09 | 58 |
myoblast | 3.24e-09 | 58 |
multi-potent skeletal muscle stem cell | 3.24e-09 | 58 |
smooth muscle cell | 4.66e-09 | 43 |
smooth muscle myoblast | 4.66e-09 | 43 |
epithelial cell | 5.81e-09 | 253 |
muscle cell | 1.53e-08 | 55 |
vascular associated smooth muscle cell | 2.15e-08 | 32 |
fibroblast | 7.01e-08 | 76 |
electrically responsive cell | 5.90e-07 | 61 |
electrically active cell | 5.90e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
mesenchyme | 9.41e-10 | 160 |
entire embryonic mesenchyme | 9.41e-10 | 160 |
extraembryonic membrane | 9.48e-10 | 14 |
membranous layer | 9.48e-10 | 14 |
multilaminar epithelium | 2.23e-09 | 83 |
trunk mesenchyme | 1.11e-08 | 122 |
epithelial tube | 1.94e-08 | 117 |
skeletal muscle tissue | 2.18e-08 | 62 |
striated muscle tissue | 2.18e-08 | 62 |
myotome | 2.18e-08 | 62 |
splanchnic layer of lateral plate mesoderm | 2.30e-08 | 83 |
muscle tissue | 2.37e-08 | 64 |
musculature | 2.37e-08 | 64 |
musculature of body | 2.37e-08 | 64 |
extraembryonic structure | 4.77e-08 | 24 |
trunk | 4.84e-08 | 199 |
epithelial vesicle | 6.92e-08 | 78 |
vasculature | 8.87e-08 | 78 |
vascular system | 8.87e-08 | 78 |
artery | 2.20e-07 | 42 |
arterial blood vessel | 2.20e-07 | 42 |
arterial system | 2.20e-07 | 42 |
organ component layer | 9.30e-07 | 66 |
somite | 9.85e-07 | 71 |
presomitic mesoderm | 9.85e-07 | 71 |
presumptive segmental plate | 9.85e-07 | 71 |
dermomyotome | 9.85e-07 | 71 |
trunk paraxial mesoderm | 9.85e-07 | 71 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 2.31e-07 | 14 |