FFCP PHASE1:Hg19::chr8:22423457..22423476,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10174 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30907 | |||
|TSSclassifier=strong | |||
|UniProt=E5RIA0 | |||
|association_with_transcript=-37bp_to_ENST00000522721_5end | |||
|coexpression_cluster_id=C1220 | |||
|description=CAGE_peak_9_at_SORBS3_5end | |||
|id=chr8:22423457..22423476,+ | |||
|ontology_enrichment_celltype=CL:0000055!3.07e-30!180;CL:0000220!2.90e-22!246;CL:0000222!5.73e-22!119;CL:0002321!8.01e-22!248;CL:0000057!3.68e-17!75;CL:0000183!1.84e-15!59;CL:0000680!1.25e-14!57;CL:0000056!1.25e-14!57;CL:0000355!1.25e-14!57;CL:0000187!2.96e-14!54;CL:0000192!1.01e-13!42;CL:0000514!1.01e-13!42;CL:0000393!6.90e-12!60;CL:0000211!6.90e-12!60;CL:0002371!1.07e-11!591;CL:0000359!2.27e-11!32;CL:0000144!9.51e-11!625;CL:0000548!9.12e-09!679;CL:0000004!9.12e-09!679;CL:0000255!9.12e-09!679;CL:0000213!3.72e-08!57;CL:0000215!3.72e-08!57;CL:0000012!4.76e-08!682;CL:0002620!8.39e-08!23;CL:0002078!1.73e-07!44 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.81e-12;32!CL:0000192;2.05e-11;43!CL:0000187;1.01e-09;55!CL:0000134;9.01e-08;55!CL:0002620;1.40e-07;23!CL:0000723;2.29e-07;61!CL:0000115;2.59e-07;36!CL:0000349;3.64e-07;19!CL:0000071;5.70e-07;18!CL:0000393;6.08e-07;61!CL:0000211;6.08e-07;61!CL:0000057;6.80e-07;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,2.21e-24,121;CL:0002321,1.09e-20,250;CL:0000057,7.08e-19,76;CL:0000680,1.44e-16,58;CL:0000056,1.44e-16,58;CL:0000355,1.44e-16,58;CL:0000187,3.97e-16,55;CL:0000192,3.87e-15,43;CL:0000514,3.87e-15,43;CL:0000393,1.47e-12,61;CL:0000211,1.47e-12,61;CL:0000359,1.73e-12,32;CL:0002078,4.31e-09,45;CL:0000213,5.04e-09,58;CL:0000215,5.04e-09,58;CL:0000115,2.03e-08,36;CL:0002620,2.46e-08,23;CL:0000071,5.79e-07,18;CL:0002546,5.79e-07,18;CL:0000349,6.09e-07,19;CL:0002494,9.76e-07,16 | |||
|ontology_enrichment_development_v019=CL:0000514;2.05e-11;43!CL:0000355;3.41e-09;58!CL:0000222;2.88e-07;121!CL:0002546;5.70e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004872!2.77e-20!84;UBERON:0002049!8.60e-19!79;UBERON:0007798!8.60e-19!79;UBERON:0000914!2.78e-18!83;UBERON:0002329!2.78e-18!83;UBERON:0003077!2.78e-18!83;UBERON:0003059!2.78e-18!83;UBERON:0007282!2.78e-18!83;UBERON:0009618!2.78e-18!83;UBERON:0007285!2.78e-18!83;UBERON:0000486!1.02e-17!82;UBERON:0001981!3.30e-17!60;UBERON:0007500!3.30e-17!60;UBERON:0004537!3.30e-17!60;UBERON:0006965!3.30e-17!60;UBERON:0000055!7.14e-17!69;UBERON:0004290!4.26e-16!70;UBERON:0005256!6.49e-16!143;UBERON:0001637!6.83e-15!42;UBERON:0003509!6.83e-15!42;UBERON:0004572!6.83e-15!42;UBERON:0002100!1.19e-14!216;UBERON:0000475!2.19e-14!365;UBERON:0003914!2.85e-14!118;UBERON:0004535!7.18e-14!110;UBERON:0001134!1.23e-13!61;UBERON:0002036!1.23e-13!61;UBERON:0003082!1.23e-13!61;UBERON:0001009!1.37e-13!113;UBERON:0000119!1.80e-13!312;UBERON:0000468!2.33e-13!659;UBERON:0002385!2.86e-13!63;UBERON:0001015!2.86e-13!63;UBERON:0000383!2.86e-13!63;UBERON:0000483!5.33e-13!309;UBERON:0004573!2.25e-11!33;UBERON:0004571!2.25e-11!33;UBERON:0000467!2.62e-11!625;UBERON:0000480!3.66e-11!626;UBERON:0000490!5.67e-11!138;UBERON:0003104!2.28e-10!238;UBERON:0009142!2.28e-10!238;UBERON:0000481!1.10e-09!347;UBERON:0003102!4.40e-09!95;UBERON:0002097!2.70e-08!40;UBERON:0002199!6.22e-08!45;UBERON:0002416!6.22e-08!45;UBERON:0000477!1.00e-07!286;UBERON:0006914!4.56e-07!25;UBERON:0004111!9.18e-07!241 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;1.09e-12;42!UBERON:0003509;1.09e-12;42!UBERON:0004572;1.09e-12;42!UBERON:0004573;2.97e-12;33!UBERON:0004571;2.97e-12;33!UBERON:0007500;8.04e-12;56!UBERON:0001981;8.04e-12;56!UBERON:0004537;8.04e-12;56!UBERON:0003914;3.75e-10;74!UBERON:0000055;1.45e-09;65!UBERON:0002049;1.70e-08;75!UBERON:0007798;1.70e-08;75!UBERON:0000947;4.96e-08;21!UBERON:0010191;4.96e-08;21!UBERON:0006914;9.08e-08;25!UBERON:0000487;4.60e-07;22!UBERON:0002097;5.16e-07;41!UBERON:0004638;5.70e-07;18!UBERON:0001986;5.70e-07;18!UBERON:0004852;5.70e-07;18!UBERON:0002199;9.67e-07;46!UBERON:0002416;9.67e-07;46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004872,1.17e-21,83;UBERON:0007503,7.52e-21,78;UBERON:0002049,2.59e-19,78;UBERON:0007798,2.59e-19,78;UBERON:0000486,3.44e-19,83;UBERON:0002329,4.26e-18,71;UBERON:0003059,4.26e-18,71;UBERON:0007282,4.26e-18,71;UBERON:0004290,4.26e-18,71;UBERON:0009618,4.26e-18,71;UBERON:0007500,4.68e-18,59;UBERON:0001981,4.68e-18,59;UBERON:0004537,4.68e-18,59;UBERON:0006965,4.68e-18,59;UBERON:0007524,5.38e-18,73;UBERON:0000055,6.80e-18,68;UBERON:0003077,1.73e-17,72;UBERON:0007285,1.73e-17,72;UBERON:0001637,1.42e-16,42;UBERON:0003509,1.42e-16,42;UBERON:0004572,1.42e-16,42;UBERON:0003914,6.79e-16,117;UBERON:0000490,2.85e-15,148;UBERON:0001134,3.02e-15,62;UBERON:0002036,3.02e-15,62;UBERON:0003082,3.02e-15,62;UBERON:0005256,6.29e-15,122;UBERON:0004535,8.67e-15,109;UBERON:0002385,1.07e-14,64;UBERON:0001015,1.07e-14,64;UBERON:0000383,1.07e-14,64;UBERON:0001009,4.72e-14,112;UBERON:0004573,1.69e-12,33;UBERON:0004571,1.69e-12,33;UBERON:0003104,2.77e-11,160;UBERON:0009142,2.77e-11,160;UBERON:0000119,3.51e-11,309;UBERON:0002100,4.29e-11,199;UBERON:0000483,1.03e-10,306;UBERON:0002199,1.03e-09,46;UBERON:0002416,1.03e-09,46;UBERON:0002097,1.10e-09,41;UBERON:0003102,1.60e-09,99;UBERON:0000926,5.94e-09,315;UBERON:0004120,5.94e-09,315;UBERON:0006603,5.94e-09,315;UBERON:0006914,1.05e-07,25;UBERON:0005631,2.07e-07,14;UBERON:0000158,2.07e-07,14;UBERON:0000947,2.54e-07,21;UBERON:0010191,2.54e-07,21;UBERON:0000487,4.37e-07,22;UBERON:0004638,5.79e-07,18;UBERON:0001986,5.79e-07,18;UBERON:0004852,5.79e-07,18 | |||
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| |||
|short_description=p9@SORBS3 | |||
}} |
Revision as of 21:05, 22 January 2014
Short description: | p9@SORBS3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_SORBS3_5end |
Coexpression cluster: | C1220_Mesenchymal_Fibroblast_Renal_Alveolar_Trabecular_Smooth_Hepatic |
Association with transcript: | -37bp_to_ENST00000522721_5end |
EntrezGene: | SORBS3 |
HGNC: | 30907 |
UniProt: | E5RIA0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 2.21e-24 | 121 |
embryonic cell | 1.09e-20 | 250 |
fibroblast | 7.08e-19 | 76 |
muscle precursor cell | 1.44e-16 | 58 |
myoblast | 1.44e-16 | 58 |
multi-potent skeletal muscle stem cell | 1.44e-16 | 58 |
muscle cell | 3.97e-16 | 55 |
smooth muscle cell | 3.87e-15 | 43 |
smooth muscle myoblast | 3.87e-15 | 43 |
electrically responsive cell | 1.47e-12 | 61 |
electrically active cell | 1.47e-12 | 61 |
vascular associated smooth muscle cell | 1.73e-12 | 32 |
meso-epithelial cell | 4.31e-09 | 45 |
lining cell | 5.04e-09 | 58 |
barrier cell | 5.04e-09 | 58 |
endothelial cell | 2.03e-08 | 36 |
skin fibroblast | 2.46e-08 | 23 |
blood vessel endothelial cell | 5.79e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 5.79e-07 | 18 |
extraembryonic cell | 6.09e-07 | 19 |
cardiocyte | 9.76e-07 | 16 |