FFCP PHASE1:Mm9::chr4:155366509..155366522,+: Difference between revisions
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{{FFCP|EntrezGene=20318|HGNC=|UniProt=Q61112|association_with_transcript=-458bp_to_ENSMUST00000105579,uc008wfr.1_5end|description=CAGE_peak_7_at_Sdf4_5end|id=chr4:155366509..155366522,+|ontology_enrichment_celltype=CL:0000838!1.23e-07!12;CL:0000791!2.30e-07!9;CL:0000789!2.30e-07!9;CL:0002420!2.30e-07!9;CL:0002419!2.30e-07!9;CL:0000790!2.30e-07!9;CL:0000084!5.51e-07!11;CL:0000827!5.51e-07!11|ontology_enrichment_celltype_v019_2=CL:0000791,5.10e-26,9;CL:0000789,5.10e-26,9;CL:0002420,5.10e-26,9;CL:0002419,5.10e-26,9;CL:0000790,5.10e-26,9;CL:0000838,1.16e-23,12;CL:0000624,3.84e-23,8;CL:0000542,1.09e-21,13;CL:0000051,1.09e-21,13;CL:0000084,5.51e-21,11;CL:0000827,5.51e-21,11;CL:0000738,1.56e-19,17;CL:0002087,1.56e-19,17;CL:0000893,4.37e-18,6;CL:0002489,4.37e-18,6;CL:0000898,4.37e-18,6;CL:0000809,4.37e-18,6;CL:0000810,4.37e-18,6;CL:0000895,4.37e-18,6;CL:0000808,4.37e-18,6;CL:0000894,4.37e-18,6;CL:0000806,4.37e-18,6;CL:0000807,4.37e-18,6;CL:0000805,4.37e-18,6;CL:0002425,4.37e-18,6;CL:0002436,4.37e-18,6;CL:0002427,4.37e-18,6;CL:0002428,4.37e-18,6;CL:0002429,4.37e-18,6;CL:0002433,4.37e-18,6;CL:0002431,4.37e-18,6;CL:0002432,4.37e-18,6;CL:0002031,5.81e-15,25;CL:0000988,3.90e-11,32;CL:0002032,3.90e-11,32;CL:0000037,3.90e-11,32;CL:0000837,3.90e-11,32;CL:0002320,5.35e-07,46;CL:0000134,5.35e-07,46|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0002370,3.03e-07,23;UBERON:0000974,3.03e-07,23;UBERON:0004807,3.03e-07,23;UBERON:0005058,3.03e-07,23;UBERON:0003351,3.03e-07,23;UBERON:0009113,3.03e-07,23;UBERON:0003295,3.03e-07,23;UBERON:0009722,3.03e-07,23;UBERON:0005562,3.03e-07,23;UBERON:0007690,3.03e-07,23;UBERON:0002021,4.78e-07,10;UBERON:0000411,4.78e-07,10;UBERON:0001950,4.78e-07,10;UBERON:0002384,5.35e-07,46;UBERON:0006562,6.89e-07,24;UBERON:0003408,6.89e-07,24;UBERON:0001557,6.89e-07,24;UBERON:0001042,6.89e-07,24;UBERON:0008814,6.89e-07,24;UBERON:0009145,6.89e-07,24|phase1_expression=0.640595388419176,0,0,0.60492842261366,0.500895729946347,0.503637815735669,0.700837921786577,1.03298658753261,5.490760163915,3.27690336850791,2.56826952338257,3.03134204182278,1.19840510951844,1.39872643870396,0.333109761815663,0.404950534779652,0.699561878128147,0.630924330716475,0.959801035240171,0,0.340173160604279,0.297872853602656,0.522399578277871,0.319984845586813,0,0,0,0.430942465371778,0,0.252030129759931,0,1.27006134691926,0,0,0.288851619751275,0.332469290716985,0.408338712524738,0,0,0,0,0.683045484958446,0.485510353031154,0.125896817975577,0.304130793658544,0,0,0.218025156380447,0.219686182734472,0.194429899074283,0,0,1.8456086666351,4.35217285206807,3.02484419228218,0,0.286533439938757,0,0.202316460859598,0.528990979272033,0,0.338844532069132,0,0,0,0.7104801149461,0.299600110518405,0,0.207379224616955,0,0,0,0.220868540951614,0,0.287536413054709,0,1.10115880999389,0.127687338085188,0.307213066512487,0.131886287730194,0.0914876436024097,0,0.279182999001381,0,1.06958773443767,0.294628585473668,0.569486723196412,0.372798891650601,0.302904773332736,0.0755715601067855,0.289864488701678,0,0,0.539703191637817,0,0,0.421333260395256,0,0,0.35333957451034,0.281686839553361,1.28326477414318,2.54805239706646,0,0.649473123033642,0.760079596425296,0.505524445014783,0.45673551887624,0.776813650941515,0.29688427812965,0.173485326766136,0.608930956624282,0,0.452167921657868,0.470354828542819,1.0053327306374,0,0.433798070759735,0,0.161766849947409,0.441683036920787,0.484875253135222,0,0,0.41889341362691,0.255457055208591,0.599075622529601,0,0.254140454146129,0.748953197024114,0.915001205637253,0.502617408451458,0.695297280769106,0.767146371990992,0.20778804455956,0.648965052271031,0.203678727700633,0.248813941220186,0.758168275301024,0.420883711772948,0.520481771850815,0.229902104433473,0.540186389416048,0.30140963567143,0.544291993210623,0,0.468508622798644,0.258703370739016,0.215567992932842,0.189106080167819,0.527853372491847,0.219195732427575,0,1.0447564995665,0.205782136407943,0.59710280045548,0,0,0.568326998791185,0,0.234526059981096,0,0,0.393528463494808,0.154267112887378,0,0,0.233530684734339,0.493679549740441,0.32833492815819,0.0810688095458557,0.146199987425332,0.219550115291051,0.134206418760372,1.26173969138476,0.617427674275707,0,0,0,0.232236671860439,0.128867461322093,0.80673409849337,0.667134131534611,0.190225626112559,0.474529061544512,0.164698954724011,0.251335208800269,0.596869416123452,0,0.898819408654221,0.216138049874694,0,0,0.228497025219458,1.1270773567308,0.407302655690628,0.775809948670503,0.49095073923223,0.126473074248515,0,0.156998727841375,0.370191491765402,0.296452627087149,0.333690211432188,0.196558995113203,0.674586337154561,0,0.482354319504834,0.25462585178142,0,0,0,0,0,0.936113019343682,0.252578877947112,0.179397413521912,0,0.369506380333209,0,0,0.678980343100753,0.234690248288502,0.167506257441816,0.238043640886014,0.780534591431195,0,0.44292937929755,0.159454768657487,0,0.345369963731791,0.578596234326046,1.50791283939272,0,0,1.103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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:20318 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q61112 | |||
|association_with_transcript=-458bp_to_ENSMUST00000105579,uc008wfr.1_5end | |||
|cluster_id=chr4:155366509..155366522,+ | |||
|description=CAGE_peak_7_at_Sdf4_5end | |||
|id=chr4:155366509..155366522,+ | |||
|ontology_enrichment_celltype=CL:0000838!1.23e-07!12;CL:0000791!2.30e-07!9;CL:0000789!2.30e-07!9;CL:0002420!2.30e-07!9;CL:0002419!2.30e-07!9;CL:0000790!2.30e-07!9;CL:0000084!5.51e-07!11;CL:0000827!5.51e-07!11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,5.10e-26,9;CL:0000789,5.10e-26,9;CL:0002420,5.10e-26,9;CL:0002419,5.10e-26,9;CL:0000790,5.10e-26,9;CL:0000838,1.16e-23,12;CL:0000624,3.84e-23,8;CL:0000542,1.09e-21,13;CL:0000051,1.09e-21,13;CL:0000084,5.51e-21,11;CL:0000827,5.51e-21,11;CL:0000738,1.56e-19,17;CL:0002087,1.56e-19,17;CL:0000893,4.37e-18,6;CL:0002489,4.37e-18,6;CL:0000898,4.37e-18,6;CL:0000809,4.37e-18,6;CL:0000810,4.37e-18,6;CL:0000895,4.37e-18,6;CL:0000808,4.37e-18,6;CL:0000894,4.37e-18,6;CL:0000806,4.37e-18,6;CL:0000807,4.37e-18,6;CL:0000805,4.37e-18,6;CL:0002425,4.37e-18,6;CL:0002436,4.37e-18,6;CL:0002427,4.37e-18,6;CL:0002428,4.37e-18,6;CL:0002429,4.37e-18,6;CL:0002433,4.37e-18,6;CL:0002431,4.37e-18,6;CL:0002432,4.37e-18,6;CL:0002031,5.81e-15,25;CL:0000988,3.90e-11,32;CL:0002032,3.90e-11,32;CL:0000037,3.90e-11,32;CL:0000837,3.90e-11,32;CL:0002320,5.35e-07,46;CL:0000134,5.35e-07,46 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,3.03e-07,23;UBERON:0000974,3.03e-07,23;UBERON:0004807,3.03e-07,23;UBERON:0005058,3.03e-07,23;UBERON:0003351,3.03e-07,23;UBERON:0009113,3.03e-07,23;UBERON:0003295,3.03e-07,23;UBERON:0009722,3.03e-07,23;UBERON:0005562,3.03e-07,23;UBERON:0007690,3.03e-07,23;UBERON:0002021,4.78e-07,10;UBERON:0000411,4.78e-07,10;UBERON:0001950,4.78e-07,10;UBERON:0002384,5.35e-07,46;UBERON:0006562,6.89e-07,24;UBERON:0003408,6.89e-07,24;UBERON:0001557,6.89e-07,24;UBERON:0001042,6.89e-07,24;UBERON:0008814,6.89e-07,24;UBERON:0009145,6.89e-07,24 | |||
|phase1_expression=0.640595388419176,0,0,0.60492842261366,0.500895729946347,0.503637815735669,0.700837921786577,1.03298658753261,5.490760163915,3.27690336850791,2.56826952338257,3.03134204182278,1.19840510951844,1.39872643870396,0.333109761815663,0.404950534779652,0.699561878128147,0.630924330716475,0.959801035240171,0,0.340173160604279,0.297872853602656,0.522399578277871,0.319984845586813,0,0,0,0.430942465371778,0,0.252030129759931,0,1.27006134691926,0,0,0.288851619751275,0.332469290716985,0.408338712524738,0,0,0,0,0.683045484958446,0.485510353031154,0.125896817975577,0.304130793658544,0,0,0.218025156380447,0.219686182734472,0.194429899074283,0,0,1.8456086666351,4.35217285206807,3.02484419228218,0,0.286533439938757,0,0.202316460859598,0.528990979272033,0,0.338844532069132,0,0,0,0.7104801149461,0.299600110518405,0,0.207379224616955,0,0,0,0.220868540951614,0,0.287536413054709,0,1.10115880999389,0.127687338085188,0.307213066512487,0.131886287730194,0.0914876436024097,0,0.279182999001381,0,1.06958773443767,0.294628585473668,0.569486723196412,0.372798891650601,0.302904773332736,0.0755715601067855,0.289864488701678,0,0,0.539703191637817,0,0,0.421333260395256,0,0,0.35333957451034,0.281686839553361,1.28326477414318,2.54805239706646,0,0.649473123033642,0.760079596425296,0.505524445014783,0.45673551887624,0.776813650941515,0.29688427812965,0.173485326766136,0.608930956624282,0,0.452167921657868,0.470354828542819,1.0053327306374,0,0.433798070759735,0,0.161766849947409,0.441683036920787,0.484875253135222,0,0,0.41889341362691,0.255457055208591,0.599075622529601,0,0.254140454146129,0.748953197024114,0.915001205637253,0.502617408451458,0.695297280769106,0.767146371990992,0.20778804455956,0.648965052271031,0.203678727700633,0.248813941220186,0.758168275301024,0.420883711772948,0.520481771850815,0.229902104433473,0.540186389416048,0.30140963567143,0.544291993210623,0,0.468508622798644,0.258703370739016,0.215567992932842,0.189106080167819,0.527853372491847,0.219195732427575,0,1.0447564995665,0.205782136407943,0.59710280045548,0,0,0.568326998791185,0,0.234526059981096,0,0,0.393528463494808,0.154267112887378,0,0,0.233530684734339,0.493679549740441,0.32833492815819,0.0810688095458557,0.146199987425332,0.219550115291051,0.134206418760372,1.26173969138476,0.617427674275707,0,0,0,0.232236671860439,0.128867461322093,0.80673409849337,0.667134131534611,0.190225626112559,0.474529061544512,0.164698954724011,0.251335208800269,0.596869416123452,0,0.898819408654221,0.216138049874694,0,0,0.228497025219458,1.1270773567308,0.407302655690628,0.775809948670503,0.49095073923223,0.126473074248515,0,0.156998727841375,0.370191491765402,0.296452627087149,0.333690211432188,0.196558995113203,0.674586337154561,0,0.482354319504834,0.25462585178142,0,0,0,0,0,0.936113019343682,0.252578877947112,0.179397413521912,0,0.369506380333209,0,0,0.678980343100753,0.234690248288502,0.167506257441816,0.238043640886014,0.780534591431195,0,0.44292937929755,0.159454768657487,0,0.345369963731791,0.578596234326046,1.50791283939272,0,0,1.10374698521893,1.12385412991454,0.937693492737625,0.163934945376675,0,0.94652465824877,0.780877488593277,0,0.477937595905104,0.445597348164788,0,0.404810701674894,0.292255857911312,0.395287777946524,1.60660658210904,0.141940085208269,0.178065603667255,0.325773918707152,0,1.32745138339963,0.485561272309963,0.604647113929502,0,0.590603785761546,0.307435147943927,0.258428293168221,0.727067458955011,0.356497378384721,0.316036757935816,0,0,0.340439605753788,0.540183282093931,0.129358683782755,0.428674070063185,0.532020700926821,0.356737635204141,0.822745103010605,0,0.23467170806371,0,0,0.65954501176592,0.807322133479528,0.784068024066026,0.835606408021955,0.164140899745061,0.291480836629851,1.66882771809459,0.341741761595705,0.206386867963223,0.370389054739423,0.188368457004691,0.136694227721025,0,0.509935289981566,0.419854356970974,0.414599921413271,0,0.474503990371703,0,0.216010681643603,0.209088296014469,0.87345025498471,0.134864346384821,0.330613822901344,0,0.129614973291793,0.621339313086926,0.56369293868419,0,0.330916980914195,0.194451188344048,0.258319646955462,0.168956125490778,0.234714477291508,0.781226309063701,0.419437377702843,0.724752362478018,0.288030006257865,0.632022241256357,0.405450430580328,0.102710957164827,0,0,0.39736270956253,0.240390899039938,0.590758108698309,0.100966449948148,0.304827226619999,0.100826185136841,0.292373642219257,0.288635524920988,0.467507608726276,0,0,0.0897138566094757,0,0.386379188064381,0.375364950902364,0.183151624267265,0,0.501572104035363,1.6942555278512,0.460325236507177,1.71868654031819,1.89038500578056,1.37016503954128,0.755393897389701,0,0.900642406448441,0.906284817968409,1.03552062350364,0.207574695168353,0.399024873401031,0,0.486213434136588,0,0.367687016900028,0.222246727801615,0.412070114477788,0,0.252697211763798,0.50695859978048,0.188626341386076,0.187283014939765,0.320125762024346,0.229741875822453,0,0.579421629724277,0.578727661391115,1.23625770240992,0.294397840268795,0.34286925238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| |||
|short_description=p7@Sdf4 | |||
}} |
Revision as of 07:42, 5 August 2015
Short description: | p7@Sdf4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Sdf4_5end |
Coexpression cluster: | NA |
Association with transcript: | -458bp_to_ENSMUST00000105579, uc008wfr.1_5end |
EntrezGene: | 20318 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 3.03e-07 | 23 |
neck | 3.03e-07 | 23 |
respiratory system epithelium | 3.03e-07 | 23 |
hemolymphoid system gland | 3.03e-07 | 23 |
pharyngeal epithelium | 3.03e-07 | 23 |
thymic region | 3.03e-07 | 23 |
pharyngeal gland | 3.03e-07 | 23 |
entire pharyngeal arch endoderm | 3.03e-07 | 23 |
thymus primordium | 3.03e-07 | 23 |
early pharyngeal endoderm | 3.03e-07 | 23 |
occipital lobe | 4.78e-07 | 10 |
visual cortex | 4.78e-07 | 10 |
neocortex | 4.78e-07 | 10 |
connective tissue | 5.35e-07 | 46 |
pharynx | 6.89e-07 | 24 |
gland of gut | 6.89e-07 | 24 |
upper respiratory tract | 6.89e-07 | 24 |
chordate pharynx | 6.89e-07 | 24 |
pharyngeal arch system | 6.89e-07 | 24 |
pharyngeal region of foregut | 6.89e-07 | 24 |