FFCP PHASE1:Mm9::chr4:41083027..41083102,+: Difference between revisions
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{{FFCP|EntrezGene=67615|HGNC=|UniProt=Q6ZWZ2|association_with_transcript=0bp_to_NM_026275,uc008sij.1_5end|description=CAGE_peak_3_at_Ube2r2_5end|id=chr4:41083027..41083102,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0009569!4.17e-09!66;UBERON:0003914!1.75e-08!47;UBERON:0002365!2.80e-08!25;UBERON:0002330!2.80e-08!25;UBERON:0005172!9.81e-08!49;UBERON:0005173!9.81e-08!49;UBERON:0002417!9.81e-08!49;UBERON:0000916!9.81e-08!49;UBERON:0005256!1.90e-07!47;UBERON:0002100!2.88e-07!98;UBERON:0002107!4.41e-07!22;UBERON:0007499!4.41e-07!22;UBERON:0006925!4.41e-07!22;UBERON:0009497!4.41e-07!22;UBERON:0000015!4.41e-07!22;UBERON:0002423!4.41e-07!22;UBERON:0006235!4.41e-07!22;UBERON:0008835!4.41e-07!22;UBERON:0003894!4.41e-07!22;UBERON:0004161!4.41e-07!22;UBERON:0008836!4.41e-07!22;UBERON:0009854!4.81e-07!23;UBERON:0009856!4.81e-07!23|ontology_enrichment_uberon_v019_2=UBERON:0002100,7.16e-10,90;UBERON:0009569,4.17e-09,66;UBERON:0003104,7.55e-09,61;UBERON:0009142,7.55e-09,61;UBERON:0005256,1.65e-08,45;UBERON:0003914,1.75e-08,47;UBERON:0002365,2.80e-08,25;UBERON:0002330,2.80e-08,25;UBERON:0005172,9.81e-08,49;UBERON:0005173,9.81e-08,49;UBERON:0002417,9.81e-08,49;UBERON:0000916,9.81e-08,49;UBERON:0005177,1.23e-07,79;UBERON:0005409,3.44e-07,47;UBERON:0002107,4.40e-07,22;UBERON:0007499,4.40e-07,22;UBERON:0006925,4.40e-07,22;UBERON:0009497,4.40e-07,22;UBERON:0000015,4.40e-07,22;UBERON:0002423,4.40e-07,22;UBERON:0006235,4.40e-07,22;UBERON:0008835,4.40e-07,22;UBERON:0003894,4.40e-07,22;UBERON:0004161,4.40e-07,22;UBERON:0008836,4.40e-07,22;UBERON:0009854,4.81e-07,23;UBERON:0009856,4.81e-07,23|phase1_expression=4.96461426024861,23.7303277194766,22.2949627300873,17.845388467103,17.5313505481222,15.1091344720701,14.2503710763271,2.58246646883153,0.422366166455,0.468129052643987,0,0.478632953972018,2.05440875917447,2.36035086531293,9.32707333083856,14.5782192520675,19.5877325875881,6.62470547252299,7.40417941470989,3.39511721438424,15.0526623567394,9.53193131528499,7.83599367416806,18.7191134668286,18.8115610475079,22.9692785646008,21.5380998079537,21.5471232685889,21.6626698180266,21.1705308998342,13.9690221712842,1.90509202037889,1.84519436275371,0,6.35473563452804,6.15068187826422,6.12508068787107,23.8563029520037,20.3147189576188,14.6586648312664,28.2351114254887,19.8083190637949,25.24653835762,14.3522372492158,13.990016508293,16.3356609423897,9.38869613217647,7.19483016055474,18.0142669842267,13.2212331370513,6.85933465964276,11.5002051491977,5.36904339384756,4.35217285206807,2.35265659399725,20.0662360108039,20.057340795713,23.2052441524849,11.3297218081375,5.81890077199236,6.97214543856797,23.3802727127701,16.0073063300005,18.8978940629094,14.8329954385046,16.3410426437603,15.8788058574755,11.9107674649682,6.73982480005105,4.99521971827255,4.20649922702764,6.56997264128748,5.52171352379034,3.30725157880376,3.83381884072945,0.919218786610021,7.70811166995721,9.70423769447427,7.21950706304344,10.8146755938759,6.40413505216868,4.68822033501084,11.1673199600552,8.4414391504752,7.79271063661732,3.83017161115768,3.27454865837937,8.01517617048792,16.7354887266337,24.4096139144917,15.6526823898906,31.8356834483113,21.759082678648,52.8909127805061,52.6318898132612,53.3151995645829,28.2293284464821,12.2709832256202,11.950156211732,8.83348936275851,6.76048414928066,8.98285341900225,12.7402619853323,0,29.8757636595475,32.4300627808126,31.8480400359313,32.1998540807749,12.6879562987114,18.7037095221679,7.28638372417771,8.8294988710521,14.9900073216438,9.79697163592047,12.9347577849275,22.7456530306713,18.2924276123437,28.9198713839823,27.4229271104461,12.6178142958979,18.5506875506731,16.0008833534623,14.9113408974498,12.0040126774734,7.74952815209784,16.6047085885584,5.27186547826049,1.79970819298022,4.3203877204842,7.9389038884556,3.66000482254901,1.88481528169297,5.56237824615285,3.3243009452943,5.40248915854856,6.00292673350703,9.980257657331,20.029522268225,10.108910337347,29.6723016799928,11.0602376518298,8.5063778640385,10.0834792690996,10.3986324306643,6.12328492361951,7.04625461566674,9.18276900685342,11.6416516832557,15.089759505299,10.2117283290622,8.44565395986955,7.89104636739269,5.56094498451196,24.3776516565517,18.9319565495308,7.96137067273973,2.1066395619397,2.05878325691772,2.27330799516474,13.4631752148076,11.7263029990548,12.244220179349,13.0209604571866,13.5767319905709,13.7297730469767,13.0219009060228,15.2915838797783,12.2603609485528,14.3167069424728,20.5209330098869,27.5633952455909,24.7077978748812,27.0046641807992,22.9492976080236,3.99550902271842,4.11618449517138,43.6152793538613,18.7759902331116,9.59797127408553,11.6118335930219,8.37638498593607,12.9077455758939,15.1217069814512,19.9736907418187,19.455691523325,24.5401442538776,21.3634927480229,25.6653848933085,27.2949721966768,26.0657628509724,27.0172562343368,27.8797782556114,14.035424670528,10.8536086979242,13.5249282807697,11.2008230314923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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:67615 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q6ZWZ2 | |||
|association_with_transcript=0bp_to_NM_026275,uc008sij.1_5end | |||
|cluster_id=chr4:41083027..41083102,+ | |||
|description=CAGE_peak_3_at_Ube2r2_5end | |||
|id=chr4:41083027..41083102,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0009569!4.17e-09!66;UBERON:0003914!1.75e-08!47;UBERON:0002365!2.80e-08!25;UBERON:0002330!2.80e-08!25;UBERON:0005172!9.81e-08!49;UBERON:0005173!9.81e-08!49;UBERON:0002417!9.81e-08!49;UBERON:0000916!9.81e-08!49;UBERON:0005256!1.90e-07!47;UBERON:0002100!2.88e-07!98;UBERON:0002107!4.41e-07!22;UBERON:0007499!4.41e-07!22;UBERON:0006925!4.41e-07!22;UBERON:0009497!4.41e-07!22;UBERON:0000015!4.41e-07!22;UBERON:0002423!4.41e-07!22;UBERON:0006235!4.41e-07!22;UBERON:0008835!4.41e-07!22;UBERON:0003894!4.41e-07!22;UBERON:0004161!4.41e-07!22;UBERON:0008836!4.41e-07!22;UBERON:0009854!4.81e-07!23;UBERON:0009856!4.81e-07!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002100,7.16e-10,90;UBERON:0009569,4.17e-09,66;UBERON:0003104,7.55e-09,61;UBERON:0009142,7.55e-09,61;UBERON:0005256,1.65e-08,45;UBERON:0003914,1.75e-08,47;UBERON:0002365,2.80e-08,25;UBERON:0002330,2.80e-08,25;UBERON:0005172,9.81e-08,49;UBERON:0005173,9.81e-08,49;UBERON:0002417,9.81e-08,49;UBERON:0000916,9.81e-08,49;UBERON:0005177,1.23e-07,79;UBERON:0005409,3.44e-07,47;UBERON:0002107,4.40e-07,22;UBERON:0007499,4.40e-07,22;UBERON:0006925,4.40e-07,22;UBERON:0009497,4.40e-07,22;UBERON:0000015,4.40e-07,22;UBERON:0002423,4.40e-07,22;UBERON:0006235,4.40e-07,22;UBERON:0008835,4.40e-07,22;UBERON:0003894,4.40e-07,22;UBERON:0004161,4.40e-07,22;UBERON:0008836,4.40e-07,22;UBERON:0009854,4.81e-07,23;UBERON:0009856,4.81e-07,23 | |||
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| |||
|short_description=p3@Ube2r2 | |||
}} |
Revision as of 10:52, 5 August 2015
Short description: | p3@Ube2r2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Ube2r2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_026275, uc008sij.1_5end |
EntrezGene: | 67615 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
trunk | 7.16e-10 | 90 |
subdivision of trunk | 4.17e-09 | 66 |
mesenchyme | 7.55e-09 | 61 |
entire embryonic mesenchyme | 7.55e-09 | 61 |
trunk mesenchyme | 1.65e-08 | 45 |
epithelial tube | 1.75e-08 | 47 |
exocrine gland | 2.80e-08 | 25 |
exocrine system | 2.80e-08 | 25 |
abdomen element | 9.81e-08 | 49 |
abdominal segment element | 9.81e-08 | 49 |
abdominal segment of trunk | 9.81e-08 | 49 |
abdomen | 9.81e-08 | 49 |
trunk region element | 1.23e-07 | 79 |
gastrointestinal system | 3.44e-07 | 47 |
liver | 4.40e-07 | 22 |
epithelial sac | 4.40e-07 | 22 |
digestive gland | 4.40e-07 | 22 |
epithelium of foregut-midgut junction | 4.40e-07 | 22 |
anatomical boundary | 4.40e-07 | 22 |
hepatobiliary system | 4.40e-07 | 22 |
foregut-midgut junction | 4.40e-07 | 22 |
hepatic diverticulum | 4.40e-07 | 22 |
liver primordium | 4.40e-07 | 22 |
septum transversum | 4.40e-07 | 22 |
liver bud | 4.40e-07 | 22 |
digestive tract diverticulum | 4.81e-07 | 23 |
sac | 4.81e-07 | 23 |