FFCP PHASE1:Hg19::chr9:1050449..1050468,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10655 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2935 | |||
|TSSclassifier=strong | |||
|UniProt=Q9Y5R5 | |||
|association_with_transcript=94bp_to_ENST00000412350,uc003zgy.3,uc003zhb.3_5end | |||
|coexpression_cluster_id=C36 | |||
|description=CAGE_peak_2_at_DMRT2_5end | |||
|id=chr9:1050449..1050468,+ | |||
|ontology_enrichment_celltype=CL:0002583!1.08e-07!2;CL:0002076!5.01e-07!43 | |||
|ontology_enrichment_celltype_v019=CL:0000945;3.23e-15;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,3.29e-15,24;CL:0000826,3.29e-15,24;CL:0000838,3.23e-07,52;CL:0000542,4.36e-07,53;CL:0000051,4.36e-07,53 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5409;8.85e-07;4 | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002331;2.41e-20;10!UBERON:0000178;8.20e-14;15!UBERON:0000179;8.20e-14;15!UBERON:0000463;8.20e-14;15!UBERON:0000478;7.03e-09;24!UBERON:0002390;7.05e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,2.04e-20,10;UBERON:0000358,2.04e-20,10;UBERON:0000307,2.04e-20,10;UBERON:0000091,2.04e-20,10;UBERON:0000087,2.04e-20,10;UBERON:0007010,2.04e-20,10;UBERON:0007806,2.04e-20,10;UBERON:0008780,2.04e-20,10;UBERON:0005728,2.04e-20,10;UBERON:0000178,7.35e-14,15;UBERON:0000179,7.35e-14,15;UBERON:0000463,7.35e-14,15;UBERON:0000478,6.57e-09,24 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.20273731613732,5.09023654589664,5.11620078538915,0,0,0,0.919421224478927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0.355123450626254,0.657017248110473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0.154048617114644,0,0,0.214840489736547,0,0.170453254832202,0.178064071293475,0.330569830721956,0,0.510450849978337,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.4793148277115,0,0,0,0,0.868124974666461,0,0,0,0,0,0,0,0.139423744278603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,1.18608451472249,1.97702302314405,1.98401704060365,0.067401132980677,0,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0.195551382734803,0,0,0,0,0,0,0,0.99402028452346,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0.196854963029498,0.592713324460491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,1.21792598380896,0,0.544017803369474,0,0.306345576763462,0.327872630709804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219284049578707,0,0,0,0,0,0,0,0,0,0,0,0,0,0.79994958341972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196295437002051,0.235939446695481,0,0,0,0,0,0,0,0,0,0,0,0.135075169236789,0,0,0,0,0,0,0,0.127762427639595,0,0.336283722218824,0,0,0,0,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,1.1294608203896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178553938605658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0,0,0,0,0,0,0,0.124149428591716,0,0,0,0,0.342233301085281,0.0673520530145875,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p2@DMRT2 | |||
}} |
Revision as of 00:35, 23 January 2014
Short description: | p2@DMRT2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_DMRT2_5end |
Coexpression cluster: | C36_B_b_splenic_plasma_xeroderma_adrenal_Burkitt |
Association with transcript: | 94bp_to_ENST00000412350, uc003zgy.3, uc003zhb.3_5end |
EntrezGene: | DMRT2 |
HGNC: | 2935 |
UniProt: | Q9Y5R5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 3.29e-15 | 24 |
pro-B cell | 3.29e-15 | 24 |
lymphoid lineage restricted progenitor cell | 3.23e-07 | 52 |
lymphocyte | 4.36e-07 | 53 |
common lymphoid progenitor | 4.36e-07 | 53 |
Ontology term | p-value | n |
---|---|---|
umbilical cord | 2.04e-20 | 10 |
blastocyst | 2.04e-20 | 10 |
blastula | 2.04e-20 | 10 |
bilaminar disc | 2.04e-20 | 10 |
inner cell mass | 2.04e-20 | 10 |
cleaving embryo | 2.04e-20 | 10 |
connecting stalk | 2.04e-20 | 10 |
inner cell mass derived epiblast | 2.04e-20 | 10 |
extraembryonic mesoderm | 2.04e-20 | 10 |
blood | 7.35e-14 | 15 |
haemolymphatic fluid | 7.35e-14 | 15 |
organism substance | 7.35e-14 | 15 |
extraembryonic structure | 6.57e-09 | 24 |