FFCP PHASE1:Hg19::chr9:132222848..132222877,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C4802 | |||
|description=CAGE_peak_at_chr9:132222848..132222877,+ | |||
|id=chr9:132222848..132222877,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.70e-23!42;CL:0000860!6.32e-23!45;CL:0000766!2.61e-21!76;CL:0000557!2.20e-17!71;CL:0002009!8.73e-16!65;CL:0002194!2.26e-15!63;CL:0000576!2.26e-15!63;CL:0000040!2.26e-15!63;CL:0000559!2.26e-15!63;CL:0000839!4.17e-15!70;CL:0000763!5.64e-11!112;CL:0000049!5.64e-11!112;CL:0000738!4.94e-10!140;CL:0000094!6.94e-07!8;CL:0002393!8.20e-07!9;CL:0002397!8.20e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.46e-29;33!CL:0002057;1.46e-29;33!CL:0000576;4.89e-23;48!CL:0000766;2.49e-20;69!CL:0000473;6.35e-20;39!CL:0000234;6.35e-20;39!CL:0000094;9.21e-13;8!CL:0000081;1.55e-10;11!CL:0002393;4.15e-09;6!CL:0002397;4.15e-09;6!CL:0000763;1.18e-08;100!CL:0002087;1.92e-07;104!CL:0000738;3.00e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.65e-42,42;CL:0002057,1.65e-42,42;CL:0000766,1.54e-40,72;CL:0000473,1.66e-37,48;CL:0000234,1.66e-37,48;CL:0000557,4.70e-30,67;CL:0000839,2.88e-29,66;CL:0000738,1.25e-28,136;CL:0002194,1.90e-28,59;CL:0000576,1.90e-28,59;CL:0000040,1.90e-28,59;CL:0000559,1.90e-28,59;CL:0002009,4.57e-27,61;CL:0000763,3.14e-23,108;CL:0000049,3.14e-23,108;CL:0000037,1.15e-21,168;CL:0000988,5.35e-21,177;CL:0002087,5.53e-21,115;CL:0002031,7.22e-20,120;CL:0002032,5.85e-19,161;CL:0000837,5.85e-19,161;CL:0000094,9.35e-13,8;CL:0002393,1.33e-12,9;CL:0002397,1.33e-12,9;CL:0000081,1.30e-10,11 | |||
|ontology_enrichment_development_v019=CL:0002057;1.60e-29;42!CL:0000049;9.46e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.61e-16!102;UBERON:0003061!1.61e-16!102;UBERON:0003081!1.03e-15!216;UBERON:0002371!4.30e-14!80;UBERON:0002193!7.62e-14!112;UBERON:0001474!2.32e-13!86;UBERON:0004765!1.89e-09!101;UBERON:0001434!1.89e-09!101;UBERON:0002204!4.49e-08!167;UBERON:0002405!9.87e-08!115;UBERON:0000926!9.42e-07!448;UBERON:0004120!9.42e-07!448;UBERON:0006603!9.42e-07!448 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.66e-08;15!UBERON:0000179;2.66e-08;15!UBERON:0000463;2.66e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.33e-31,98;UBERON:0003061,3.33e-31,98;UBERON:0002193,1.46e-26,108;UBERON:0003081,2.59e-26,203;UBERON:0002371,4.05e-26,76;UBERON:0001474,4.22e-23,82;UBERON:0004765,9.87e-20,90;UBERON:0002405,1.03e-19,93;UBERON:0001434,2.53e-16,100;UBERON:0000926,3.32e-13,315;UBERON:0004120,3.32e-13,315;UBERON:0006603,3.32e-13,315;UBERON:0002204,2.42e-11,167;UBERON:0000178,2.05e-08,15;UBERON:0000179,2.05e-08,15;UBERON:0000463,2.05e-08,15 | |||
|phase1_expression=0.363356758541113,0.214100523890983,0.422863212287913,1.0007329835313,0.446961094427288,0,0,0.631719873426831,1.04474251279935,0.245733936501509,0.697801167972428,0.218441372130172,0.527533956456907,0.247532705920093,0.331397375727916,0.672325146451775,0,0.730310090387373,0,0.123121058076788,1.22400414746552,0.313454721478088,0.572471974262113,0.684372125364421,0.87879847716362,0.0764134057479513,0.0821005894499457,0.0787107813136792,5.11373559903575,3.83829398097213,8.3600706590681,0.919421224478927,0,1.10926203050036,0,0,2.05520307534393,7.20194031091441,5.41470008169383,5.20826089718044,0.447830948479849,0.32389366601898,0.515151135268373,3.05336301437086,5.66813915533214,7.27752183563449,4.88100977501938,4.52284676824008,5.26500830521676,0.863077176966451,3.33008918487831,4.02019790810595,3.7922024881028,6.45484683583826,2.70852973188684,4.51781614902251,3.547779950752,5.39336362668203,3.67300670845083,3.20929027076094,3.19668562899521,0.989553900560148,1.39624560335142,2.13112375266347,0.580418477257168,1.13477044938228,4.9825779919646,2.00998932205395,4.69334626578181,3.69221035998698,1.81619850790011,1.10483290796269,1.26584954976354,2.74631872205524,2.76385589954557,5.03180749220102,2.13424399178341,3.30389164251314,1.6072558669708,4.84521664360123,1.9891667719909,3.83594722905731,0,0,0,0,0,0,0,0,1.1384259382189,0.587237189370939,0.764546456250458,5.28685314316103,1.12101712596307,1.58030450865046,1.37696839079683,4.32311839024081,2.67281948699362,0,0.32592226663359,0.473447805734733,1.94826728407911,0.557052284425868,0.294605907474837,0.664601683750863,0.270803863765016,0.640456598628376,0.650296737799391,0.493313713811028,0,0,0.296573126324121,0.535081656179426,1.04535523804977,0.226618685395132,1.91610246800961,1.37450978193052,1.77113784413652,0,0,0,0.150575119077773,0.255973222308837,0,0.236777252044017,0,6.04820229674197,5.88368430723716,3.47578569318718,2.43806866313962,2.01210257911091,0.255725123687061,0.361439152384566,0,0.434539556882471,2.3858578411533,0.973269740605272,0.283604451492204,0.221729397462564,0.527008714158756,0.0654895377488563,0,0,0,0,0.26591592103773,0.476981248610684,0,1.85728750664782,0.596287222100115,2.58070378531837,0.694281003215189,1.13061588384802,1.25849830862972,0,0.208994966536811,0,0.35576626268671,0.33472061276467,0,0.760272105718513,0.488124115096339,0,1.62028389576352,0.17859945656816,0.44905874525234,0.788280363383256,4.5994991239765,0.949265659568129,0.549605231791222,14.495845917967,11.6334079244498,0,0,0.12663051166458,0.794455084879313,0.573673241497627,0.354668382198357,0.560677600142307,1.06748995729705,0.98667019366864,1.24484414159907,0.404132016209064,0.326923806226917,0.302714855289863,0.576175924479999,0.468642863667593,0.312160076830321,0,0.149448680551801,0.704606991862589,0.809364721840658,0.140450806702248,0.204154171254893,0.245668634623536,0.413303124703062,1.18800285728205,0.741800787835671,0,0,0,0.125118519871964,0.277064115484183,0,0,0.901428353439581,0.226864366320042,0.538168907066586,0.213557388818567,1.69545520927649,0.600182192168805,0.92747276314595,0.515281080091258,0.558350568994769,0.506328996723799,0.194874010322397,0.504867548488229,0.368199594569197,0.323292113637624,0.710019185033229,0.201504196455281,0.67824236924195,0,0,0,0.121973706129595,0,0.348581828608555,0,0,0,0,0,4.14404764057442,0,0,1.0647612003586,1.01150814046861,0.482022059766964,0.661763836394364,0.435758888184812,0.71181185733329,0.404493924480493,0.196221465125346,0.38474715694639,0,0,0.8231480226628,1.47008711385542,0,0.982827216677626,0,0,0.122988438543114,0.171567810298526,0.109750285408626,0,0,0.0925884451585296,0.325808305310325,1.03993478527958,0,0,0.352226082707465,0.144366447761074,0.925971025153221,0.380508304469197,5.53143078571493,5.15091697256924,0,0.936017060556951,0.445893486866185,0,0,0.141775097242386,0,0,0.766765358330422,0,0.792435906119034,14.512968087854,10.2325166926043,7.06957627187728,0.253991577168676,0.381988425558278,1.17217447210047,0,0.616964956219941,0.300343057843917,0.571652865261156,0.224262168690721,0,0.2933531432838,0.129271715757778,7.15312891703765,0,0.26593811658487,0,0.257207374262142,0,0.532844358032199,0,1.62786481617433,1.64648067356154,0,0,0.791951872933429,0,0,0.299918973546171,0,0.502257091432126,2.10833939483032,0.239624855491583,0,1.42636905040718,0,0.205476322550383,0.358121926479791,0.112085143993527,7.88123040807709,15.5251853898852,8.72732646702289,0.254094624222463,0,0,0.502548796003046,0,10.4860983352606,8.97484377612075,14.5045429702612,0.12269149171914,0.500170521059677,0.542530047399471,0.415941723061614,0.713715955188647,0.630809660135739,0.234282829985426,0,0,0,0.664225598535437,0.737476674166813,0.0868836144680828,0.587403472388222,1.02943027143257,1.24060815673732,7.11856862701436,1.60091336705167,0.606255142892519,1.66435439510497,0.30239029332968,0.248107807818777,0.61384789315225,0.280660094433074,0.384417447767103,1.02341449813341,0.321707842287215,0,0.462629081407967,0.532685175939381,0.492762936082855,0,0.348631135379878,0.120859449591622,0.40101294060657,0.0920809889358963,0.114814448164607,0.182091168006717,0.655622074797121,0,0.0770153371044148,0,2.92278449306521,0.105551628892876,1.13733384070897,0.170093705276516,0,3.08454505380579,0.270946437543853,0,0,0.831076008928724,0,0,0,0.256450125116389,0,0,1.33953315142039,0.640986253728404,0.660075999364704,0,0,1.6068392984416,0.773365746336976,0.462145851343933,0.460511024178389,0.551346289938122,0.322260734604821,0.145016693914229,0.596586391912706,0.178064071293475,0.165284915360978,0.192190067365106,0.255225424989168,0.4046311234222,0,0.62962469366128,2.0911118104818,0.924100740528266,0.532306030317022,1.73986598415015,1.29726953372744,0.143124886741991,0.372158369359667,0.316379424718726,0.571890581771475,0.255897791311334,0,1.59101623962968,0,0.179872457583315,0.54907405947211,0.117812402345686,0.202182481573316,0,0.421258456238981,0.48763373908959,0.243713489631284,1.05650146756755,0.409499734223957,0.565621727814851,1.13008116620243,1.65409603063837,0,2.63070531152258,0.578775534266688,0.655894752046633,0.608731130888112,1.239293992399,1.40847801266121,0,0.0982490410131212,0.35667105148125,0.354761064070598,0.211107635297664,0.329294892959902,0.75894634753143,0.349934720244983,0.192444225451024,0,0,0.847294206991012,0,0,0.443430153536676,0,4.56702848308952,3.0585488285695,1.13929437434833,0,1.23408681925858,3.8908398671563,3.24018862342869,1.58625035258854,0.320472213382419,0,0,0.185803175125719,0,0.213425530045242,0,0,0.383010740264733,0.211673582723883,0,0.280797178113459,0,0,0,0,0.321176150207399,0.605399121573143,0,0.343505344755765,0,0,1.00109485027145,0.390776190804081,0,0,0.540911356951966,0.33307196799782,0,0,0.879049075631364,0,0.111443384277478,1.42068073403207,0,1.48482340416319,0,0,0.422008249231538,0.667852230137435,0.16480387422676,1.05562704063997,2.39097585901284,0,0,0.102268682502155,0.123084805461069,0.311039587661807,0.0898683511473268,0,1.53471711068062,1.479651084554,0,0,0,0.185536196323703,0,0.520855522170466,0,2.89999830173917,0.341380344856499,0,0.472775363535873,0,0.291604613383254,0.173624994933292,0.885741385813839,0.120596438625408,0,0.221158519862449,0.591095237907095,0,0.21787692703798,0,0.769502585037971,0,0.23056390438806,0,0.108647371922008,0.31900115973192,0.457987967009312,0,0,0.31396051279005,0.166211681900156,0.225595660617181,0,0.167821586975843,0.189753732724185,0,0,0.816164040795739,0.282706142867882,0,0,0.0884575645033392,0,1.48260564340311,0.247127877893006,0.626531697032732,0.134802265961354,0,0.234264445725339,0,0.782658475728359,0,1.57833761139756,2.41981432097328,0.30607276163049,0.695052375913368,0.150323419414493,0.103688191397247,0.664653872707185,0.992975867626496,1.2557316736289,3.58417289318877,0.284609546029793,0.138674673013139,0.347119476670262,0.195984794828755,0.0870592065804026,1.04836000945218,0.171986032471617,0.290268993867255,0.584714536689484,0.574808199372465,0.484945082442097,0,1.35588444468319,0.274083849293502,0.19871461170299,0.126621591911757,0.586654148204409,0,0.640358984218058,0.19980960958213,0.576361668616424,0,0.514784993585894,0.14405479798815,0.124252535565433,0,0.407712618220842,0.418411385249333,0.101998217636322,0.577901179803038,0,0.273810757783986,1.27746588066972,0,0.525774708558629,0.837847203816763,0,1.43574604915363,0.199679000498991,0.429226048136571,0.446342914883745,0.335917362433631,0.360299883542404,1.16495949527454,0,0.164831716762333,0.0674035438541849,0.492137407573744,0.169346664131569,0,0.136203406111576,0.160753148465019,0,0,0.674921674654501,0.77380195455795,0.0607495566580247,0.335434687599266,0.630445658393585,0.419636705079985,0,0.179287339332845,0.767660789277781,0.714695326373367,0.662091970365432,0.5085370753095,0,0,0.653174720218818,0,0.082092520749339,0.511164065356265,0.226624183040251,0.146552233678082,0,0.387848869084652,0.66116300871345,0,0,0.106787412567695,0.943225830597996,0.414239055347196,0,0,0,0.638341257770182,0.544017803369474,0.5013797880454,0.612691153526923,0,0.471162288750703,0,0.244052529803926,0.3755727921195,0.573409195690071,0.443716206147409,0.248385611765534,0.276697269872462,0.37494122388632,0.606596470166591,0.285465333544967,0.470531639396343,0.468334905806882,1.30428925749743,0.597019211547496,0.467426619694449,0.554805861502613,0.378806010550178,0,0,0.228840068396924,0.453692771289717,0.15543720058278,0.147855149989634,0,0.449803112163605,0.155262956876259,0.829412415681711,0.265841714557995,0,0,0,0,0.363697318405119,0.322231671127465,0.464033759878494,0,0.400027764663154,0.343395705182793,0,1.26184898228651,0.192619830407303,0,0.521988583930423,0.226705925512272,0.694567422971502,0.489473409012935,1.25362188757041,0.617602894321944,0.657852148736121,0.176689145945881,0.771656153083659,0.844712203265363,1.02496607435179,0,1.21543982470953,0.414775308455192,0.194860308839388,0.531459361253452,0.163565394255844,0,0.245772908753719,0.422624246717254,0,0.213383459388282,0,0,0.368211900503681,0,0.622077260032973,0.76736622782191,0.215649622793364,0.314531883711793,0.54604819096007,0.169732529954025,0.212574920101683,0.247871528518004,0,0,0.0788617450012534,0,0,0,0.256916900385838,0,0.319267718114302,0.205116364240755,0.756215088665154,0.345786262321089,0.161475645631851,0,0.588886311006154,0,0.183428598521679,0.115525666150338,0,0.690359926060101,0.397832444232549,0.676892955143315,0.20170506870352,1.56302802246618,0,0.163771917510097,0.739280431085226,0.0675375846183947,0,0.413373593002368,0.126831620387814,0,0,0.496211178389294,0,0.511049710558381,0.535701835878287,0,1.21393120847326,2.04895972216168,0.975726071789027,0.345701962667338,0.685952037749674,0.135939465953663,0.131545547125698,0.118193840883968,0.111231401892069,1.17739639275771,0.157115589916002,0.840816489941367,0.913158720509496,0,0.9555033757741,1.07214816264985,1.58013611732727,0,0.173858272302579,0,0,0.17071847709395,0,0.430227358820278,0,0,2.9637093513365,0.68732060563215,0.31020638566432,0,0.447421727191169,0.196300467230486,0.243835849964539,0,0,0,0,0.233939463462106,1.98950775161368,0.118920090777569,0,0.329821550236287,0.301925687133347,0,0.437119121007915,0.470317296361523,0.245148321753905,0,1.17785080268967,1.18818560130834,0.4226557275834,0,0.469919589899268,0.257831551894309,0,1.07132363163395,0,0.240724100067505,0.730336388246517,0,0.430018749454354,0.157771562193185,0.271965960763659,0,0,0,0.462175628631418,0,0.252332849670158,0,1.0135880080915,0,0.26721740526556,1.01084389488329,0,0.606229585745915,0.535928260312357,0,0.310298987585686,0,0.476128862927481,0.258355639344024,0.558672428662721,0.560659312903067,0.954707374172474,1.61693751166575,0.217716747896961,0.342233301085281,0.202056159043763,0.286888821570705,0.665320713092027,0.569822880276821,0.213454691755431,0,0.0898252021065869,0,0.733448665097199,0.813792356631477,2.66302709674205,0.201273793591026,0 | |||
|short_description=p@chr9:132222848..132222877,+ | |||
}} |
Revision as of 03:39, 23 January 2014
Short description: | p@chr9:132222848..132222877, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:132222848..132222877, + |
Coexpression cluster: | C4802_Mast_Neutrophils_Eosinophils_Natural_CD14_Basophils_CD8 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.65e-42 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.65e-42 | 42 |
myeloid leukocyte | 1.54e-40 | 72 |
defensive cell | 1.66e-37 | 48 |
phagocyte | 1.66e-37 | 48 |
granulocyte monocyte progenitor cell | 4.70e-30 | 67 |
myeloid lineage restricted progenitor cell | 2.88e-29 | 66 |
leukocyte | 1.25e-28 | 136 |
monopoietic cell | 1.90e-28 | 59 |
monocyte | 1.90e-28 | 59 |
monoblast | 1.90e-28 | 59 |
promonocyte | 1.90e-28 | 59 |
macrophage dendritic cell progenitor | 4.57e-27 | 61 |
myeloid cell | 3.14e-23 | 108 |
common myeloid progenitor | 3.14e-23 | 108 |
hematopoietic stem cell | 1.15e-21 | 168 |
hematopoietic cell | 5.35e-21 | 177 |
nongranular leukocyte | 5.53e-21 | 115 |
hematopoietic lineage restricted progenitor cell | 7.22e-20 | 120 |
hematopoietic oligopotent progenitor cell | 5.85e-19 | 161 |
hematopoietic multipotent progenitor cell | 5.85e-19 | 161 |
granulocyte | 9.35e-13 | 8 |
intermediate monocyte | 1.33e-12 | 9 |
CD14-positive, CD16-positive monocyte | 1.33e-12 | 9 |
blood cell | 1.30e-10 | 11 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.33e-31 | 98 |
blood island | 3.33e-31 | 98 |
hemolymphoid system | 1.46e-26 | 108 |
lateral plate mesoderm | 2.59e-26 | 203 |
bone marrow | 4.05e-26 | 76 |
bone element | 4.22e-23 | 82 |
skeletal element | 9.87e-20 | 90 |
immune system | 1.03e-19 | 93 |
skeletal system | 2.53e-16 | 100 |
mesoderm | 3.32e-13 | 315 |
mesoderm-derived structure | 3.32e-13 | 315 |
presumptive mesoderm | 3.32e-13 | 315 |
musculoskeletal system | 2.42e-11 | 167 |
blood | 2.05e-08 | 15 |
haemolymphatic fluid | 2.05e-08 | 15 |
organism substance | 2.05e-08 | 15 |