FFCP PHASE1:Mm9::chr5:72559381..72559438,-: Difference between revisions
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{{FFCP|EntrezGene=27784|HGNC=|UniProt=Q9CZG3,Q4QQP1|association_with_transcript=0bp_to_ENSMUST00000013693,NM_178599,uc008xre.1,uc008xrf.1_5end|description=CAGE_peak_1_at_Commd8_5end|id=chr5:72559381..72559438,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!2.83e-08!63;UBERON:0004111!4.59e-08!122;UBERON:0000025!1.64e-07!114;UBERON:0002329!2.77e-07!11;UBERON:0003077!2.77e-07!11;UBERON:0003059!2.77e-07!11;UBERON:0007282!2.77e-07!11;UBERON:0009618!2.77e-07!11;UBERON:0007285!2.77e-07!11;UBERON:0000955!7.62e-07!50;UBERON:0006238!7.62e-07!50;UBERON:0000383!8.90e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0010314,2.46e-09,92;UBERON:0004111,4.59e-08,122;UBERON:0000025,1.64e-07,114;UBERON:0007524,2.77e-07,11;UBERON:0003077,2.77e-07,11;UBERON:0007285,2.77e-07,11;UBERON:0000383,8.90e-07,10|phase1_expression=47.404058743019,16.40184415905,13.6499771816861,10.2837831844322,9.01612313903425,14.2697381125106,14.4839837169226,21.6927183381848,4.92760527530834,3.97909694747389,15.4096171402954,16.4330647530393,26.7073138692681,25.4393371039282,26.3156711834374,28.7514879693553,30.7807226376385,29.6534435436743,27.5600011547535,23.3414308488917,25.3429004650188,22.4397549714001,20.6347833419759,19.8390604263824,17.8939239232393,24.6919744569459,14.6459078694085,20.6852383378453,28.6935363379125,29.4875251819119,23.5034341294623,6.35030673459631,6.76571266343027,15.8481681015439,19.3530585233354,20.2806267337361,14.4960242946282,82.0321996244339,76.5708637633324,79.0520853400435,89.9994176687452,86.7467765897226,87.8773738986388,53.3802508216448,52.7160042341476,45.1525010317737,7.04152209913235,10.0291571935005,11.2039953194581,17.1098311185369,15.6784792220406,10.062679505548,26.1740865450069,26.1130371124084,16.4685961579807,33.4437266846731,41.8338822310585,45.3791441204149,27.1104057551861,24.8625760257855,31.691570175309,10.165335962074,12.450127145556,17.997994345628,12.8552627133707,15.6305625288142,9.28760342607055,13.831858991576,28.6183329971398,21.7359560714022,25.86997024622,17.7103610330358,23.412065340871,30.2552274060936,22.5236856892855,22.9804696652505,53.9567816897005,41.3706975396008,48.2324514424605,26.1134849705784,32.2036505480482,27.6084086395083,37.6897048651864,41.6444331423443,47.5202550585879,33.8822873294718,39.1522122197533,39.3302830691384,43.3153825865813,35.7453479305096,34.204009666798,27.5335640634044,12.2394840067395,29.1439723484421,23.3919510281161,27.7776670000348,34.549327352411,42.7780109670925,36.8896126536074,34.9806178765237,38.5910970188105,32.0816193535795,20.3844191765317,21.3320010945999,29.6592726185363,30.4031838570118,34.3756622610053,23.8644308612835,30.5546702703663,34.4385762630393,18.9099006175088,17.6589977421042,21.9084722393256,28.6373017049983,27.9861122982977,38.9566433121994,29.9105910958592,27.3292784578633,28.307537662396,25.8826959915855,28.9302389183116,20.8496358848145,22.3670113461747,30.1564220921894,31.4170060220183,20.4365644166873,30.5528567490097,41.9931911695385,26.9388881394897,46.435098215495,41.1750542536764,39.3298122113266,49.5399312547988,49.8645141794145,36.1551197533635,45.7520361851077,35.3382592560598,33.5898820647251,31.3376220457757,41.0361618978624,33.3108333984522,37.0142388137891,37.4529229995126,26.2226383034144,30.0721326248869,28.6974733438064,30.1719553082327,27.9399640398137,25.4370231660754,30.6351849871867,33.7826158394782,32.2217726668535,29.751055667139,25.4224081561182,37.6581309626537,26.4715574868596,37.9195121149147,40.1462735098956,42.0561979105477,35.4185071035708,29.0812314376559,36.552598476586,29.8298366837365,31.2855128478372,32.0875594805747,33.0198201545579,23.8763327245661,34.445775998315,26.8232555358973,31.027650710949,31.9411109610672,34.0645970701024,30.297915910165,38.3830357654663,56.5679961637502,47.5419309192294,26.10308385572,18.7759902331116,30.073643325468,29.0295839825548,26.5466970323512,33.4794650874749,34.9133528836446,33.0992589435853,20.404749646414,35.7396731751104,27.8982081768299,35.4142520233248,32.3640384617739,17.9763881730844,29.1786367330837,22.7021051509979,18.3977863924489,28.6763766650419,23.6686244913469,32.1769097995597,28.1231106393057,34.0860084666948,34.8433319554658,32.4742325555125,39.5636794160265,37.6361349961492,27.5700943191048,23.024624588821,23.3905204184712,26.084005036643,20.2860121388503,24.8412474544989,22.9163266603278,19.5633373466551,25.6173658304556,22.7885972946108,27.3159592401974,25.3055844414582,28.7074659265396,23.9949934049756,28.7035861635059,31.3588288886189,35.8421188923213,39.0352308247199,30.4744505946588,24.4432923516271,25.1118565668697,28.6435700225505,28.5652369063216,29.4651808265276,29.3201368037515,33.8840975162626,33.4855014180723,29.1676700194014,32.6374615726543,36.7408608797039,63.3323392544944,77.2346071022568,22.1293922858566,19.3155722413313,43.6697604766794,43.7199590988918,41.9673460164289,39.8904064982909,26.50269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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:27784 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q9CZG3,uniprot:Q4QQP1 | |||
|association_with_transcript=0bp_to_ENSMUST00000013693,NM_178599,uc008xre.1,uc008xrf.1_5end | |||
|cluster_id=chr5:72559381..72559438,- | |||
|description=CAGE_peak_1_at_Commd8_5end | |||
|id=chr5:72559381..72559438,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!2.83e-08!63;UBERON:0004111!4.59e-08!122;UBERON:0000025!1.64e-07!114;UBERON:0002329!2.77e-07!11;UBERON:0003077!2.77e-07!11;UBERON:0003059!2.77e-07!11;UBERON:0007282!2.77e-07!11;UBERON:0009618!2.77e-07!11;UBERON:0007285!2.77e-07!11;UBERON:0000955!7.62e-07!50;UBERON:0006238!7.62e-07!50;UBERON:0000383!8.90e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,2.46e-09,92;UBERON:0004111,4.59e-08,122;UBERON:0000025,1.64e-07,114;UBERON:0007524,2.77e-07,11;UBERON:0003077,2.77e-07,11;UBERON:0007285,2.77e-07,11;UBERON:0000383,8.90e-07,10 | |||
|phase1_expression=47.404058743019,16.40184415905,13.6499771816861,10.2837831844322,9.01612313903425,14.2697381125106,14.4839837169226,21.6927183381848,4.92760527530834,3.97909694747389,15.4096171402954,16.4330647530393,26.7073138692681,25.4393371039282,26.3156711834374,28.7514879693553,30.7807226376385,29.6534435436743,27.5600011547535,23.3414308488917,25.3429004650188,22.4397549714001,20.6347833419759,19.8390604263824,17.8939239232393,24.6919744569459,14.6459078694085,20.6852383378453,28.6935363379125,29.4875251819119,23.5034341294623,6.35030673459631,6.76571266343027,15.8481681015439,19.3530585233354,20.2806267337361,14.4960242946282,82.0321996244339,76.5708637633324,79.0520853400435,89.9994176687452,86.7467765897226,87.8773738986388,53.3802508216448,52.7160042341476,45.1525010317737,7.04152209913235,10.0291571935005,11.2039953194581,17.1098311185369,15.6784792220406,10.062679505548,26.1740865450069,26.1130371124084,16.4685961579807,33.4437266846731,41.8338822310585,45.3791441204149,27.1104057551861,24.8625760257855,31.691570175309,10.165335962074,12.450127145556,17.997994345628,12.8552627133707,15.6305625288142,9.28760342607055,13.831858991576,28.6183329971398,21.7359560714022,25.86997024622,17.7103610330358,23.412065340871,30.2552274060936,22.5236856892855,22.9804696652505,53.9567816897005,41.3706975396008,48.2324514424605,26.1134849705784,32.2036505480482,27.6084086395083,37.6897048651864,41.6444331423443,47.5202550585879,33.8822873294718,39.1522122197533,39.3302830691384,43.3153825865813,35.7453479305096,34.204009666798,27.5335640634044,12.2394840067395,29.1439723484421,23.3919510281161,27.7776670000348,34.549327352411,42.7780109670925,36.8896126536074,34.9806178765237,38.5910970188105,32.0816193535795,20.3844191765317,21.3320010945999,29.6592726185363,30.4031838570118,34.3756622610053,23.8644308612835,30.5546702703663,34.4385762630393,18.9099006175088,17.6589977421042,21.9084722393256,28.6373017049983,27.9861122982977,38.9566433121994,29.9105910958592,27.3292784578633,28.307537662396,25.8826959915855,28.9302389183116,20.8496358848145,22.3670113461747,30.1564220921894,31.4170060220183,20.4365644166873,30.5528567490097,41.9931911695385,26.9388881394897,46.435098215495,41.1750542536764,39.3298122113266,49.5399312547988,49.8645141794145,36.1551197533635,45.7520361851077,35.3382592560598,33.5898820647251,31.3376220457757,41.0361618978624,33.3108333984522,37.0142388137891,37.4529229995126,26.2226383034144,30.0721326248869,28.6974733438064,30.1719553082327,27.9399640398137,25.4370231660754,30.6351849871867,33.7826158394782,32.2217726668535,29.751055667139,25.4224081561182,37.6581309626537,26.4715574868596,37.9195121149147,40.1462735098956,42.0561979105477,35.4185071035708,29.0812314376559,36.552598476586,29.8298366837365,31.2855128478372,32.0875594805747,33.0198201545579,23.8763327245661,34.445775998315,26.8232555358973,31.027650710949,31.9411109610672,34.0645970701024,30.297915910165,38.3830357654663,56.5679961637502,47.5419309192294,26.10308385572,18.7759902331116,30.073643325468,29.0295839825548,26.5466970323512,33.4794650874749,34.9133528836446,33.0992589435853,20.404749646414,35.7396731751104,27.8982081768299,35.4142520233248,32.3640384617739,17.9763881730844,29.1786367330837,22.7021051509979,18.3977863924489,28.6763766650419,23.6686244913469,32.1769097995597,28.1231106393057,34.0860084666948,34.8433319554658,32.4742325555125,39.5636794160265,37.6361349961492,27.5700943191048,23.024624588821,23.3905204184712,26.084005036643,20.2860121388503,24.8412474544989,22.9163266603278,19.5633373466551,25.6173658304556,22.7885972946108,27.3159592401974,25.3055844414582,28.7074659265396,23.9949934049756,28.7035861635059,31.3588288886189,35.8421188923213,39.0352308247199,30.4744505946588,24.4432923516271,25.1118565668697,28.6435700225505,28.5652369063216,29.4651808265276,29.3201368037515,33.8840975162626,33.4855014180723,29.1676700194014,32.6374615726543,36.7408608797039,63.3323392544944,77.2346071022568,22.1293922858566,19.3155722413313,43.6697604766794,43.7199590988918,41.9673460164289,39.8904064982909,26.5026904309656,31.2350995437311,28.4358885007295,34.1725381072149,31.1918143715352,29.4399592020386,27.5271277138928,27.7643065015746,30.4371589018823,31.4894890093371,25.2653351670718,17.0942979520565,39.7444180822726,31.1793532418092,29.2039304347918,22.8213797985683,20.5580018736031,24.7072654480227,10.335566250827,29.2063390546731,27.3933990758314,21.0849563096953,19.9638531895444,28.1272714562876,25.3004660579997,34.0347292719017,40.171873478947,29.1698972330723,13.3239444296237,31.9362182197073,38.4828307003734,31.0361742627603,32.0870590174136,15.5277124048446,30.2726503402186,38.7652689680791,20.7296694171664,21.9298716412168,36.1680315798828,29.3723944400119,30.6786924088061,25.4418394604845,23.3184669303881,49.3231303347956,19.3084095301574,27.0366797031821,27.593984578087,25.9948470666474,21.734382207643,19.9037010689675,26.1766782190537,29.6697078926155,29.1601944727334,40.0961659566348,30.36825538378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| |||
|short_description=p1@Commd8 | |||
}} |
Revision as of 13:59, 4 August 2015
Short description: | p1@Commd8 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Commd8_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000013693, NM_178599, uc008xre.1, uc008xrf.1_5end |
EntrezGene: | 27784 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
structure with developmental contribution from neural crest | 2.46e-09 | 92 |
anatomical conduit | 4.59e-08 | 122 |
tube | 1.64e-07 | 114 |
dense mesenchyme tissue | 2.77e-07 | 11 |
paraxial mesoderm | 2.77e-07 | 11 |
presumptive paraxial mesoderm | 2.77e-07 | 11 |
musculature of body | 8.90e-07 | 10 |