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FFCP PHASE1:Mm9::chr6:101327996..101328010,-: Difference between revisions

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{{FFCP|EntrezGene=55983|HGNC=|UniProt=Q69ZS0,Q3UPS8|association_with_transcript=-105bp_to_ENSMUST00000075994,NM_018884,uc009dcd.2,uc009dcf.1,uc012eps.1_5end|description=CAGE_peak_1_at_Pdzrn3_5end|id=chr6:101327996..101328010,-|ontology_enrichment_celltype=CL:0000107!3.03e-07!9|ontology_enrichment_celltype_v019_2=CL:0000107,2.65e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000468!3.77e-12!333;UBERON:0000922!1.13e-09!328;UBERON:0004535!6.98e-09!23;UBERON:0001009!6.98e-09!23;UBERON:0007100!2.55e-08!18;UBERON:0000948!2.55e-08!18;UBERON:0005498!2.55e-08!18;UBERON:0004140!2.55e-08!18;UBERON:0009881!2.55e-08!18;UBERON:0004141!2.55e-08!18;UBERON:0003084!2.55e-08!18;UBERON:0007005!2.55e-08!18;UBERON:0004139!2.55e-08!18;UBERON:0004291!2.55e-08!18;UBERON:0002410!3.03e-07!9;UBERON:0000010!5.33e-07!11|ontology_enrichment_uberon_v019_2=UBERON:0004535,5.89e-09,23;UBERON:0001009,5.89e-09,23;UBERON:0007100,2.18e-08,18;UBERON:0000948,2.18e-08,18;UBERON:0005498,2.18e-08,18;UBERON:0004140,2.18e-08,18;UBERON:0009881,2.18e-08,18;UBERON:0004141,2.18e-08,18;UBERON:0003084,2.18e-08,18;UBERON:0007005,2.18e-08,18;UBERON:0004139,2.18e-08,18;UBERON:0004291,2.18e-08,18;UBERON:0002410,2.65e-07,9;UBERON:0000010,4.69e-07,11;UBERON:0000922,9.47e-07,320|phase1_expression=11.8510146857548,0.697950815278722,0,0,0,0.33575854382378,0.233612640595526,0,0,0,0,0,0,0,0,0.404950534779652,0,0,0,0,3.656861476496,0,0,0,0,0,0,0.215471232685889,0.190023419456374,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,16.1147927008739,18.1464706882931,18.5382219683298,13.3006528539167,0.218025156380447,1.75748946187577,2.72201858703997,4.61955191363696,2.87505128729943,0,0,0,14.1492689819771,20.3438742356517,17.0171790451556,2.42779753031517,2.11596391708813,3.80298842103708,3.38844532069132,6.22506357277798,0,0.988866362566974,0,8.98800331555214,6.53171119046643,4.14758449233911,4.86021377994086,5.8890989178387,9.14083150092171,8.39300455616131,2.9397791811589,3.25874601462004,2.75765635983006,5.50579404996943,1.65993539510744,0.614426133024974,1.84640802822271,1.64677758484337,2.08365348222704,1.67509799400829,2.25105044012672,1.68078072554491,12.6690291753677,9.39653093274079,4.84638559145781,4.69502398665741,12.7715936580468,1.73918693221007,2.58127163094416,0.679971333707751,3.2382191498269,1.29955283489534,1.79210754838934,7.3031098468511,0,0,0,7.04217098883402,0,0,0,2.38140145112336,3.29367825117628,3.53867111510348,3.53970027129086,0.258937883647172,7.27366481417641,6.24547176358089,7.91610243611567,4.84292544237723,4.22023393547343,4.58595957829249,7.79132866243988,4.6967043869531,5.35017620603673,3.5384422077995,14.3972496453194,3.97514733228708,2.42437626567611,9.31958806090611,0,1.25668024088073,3.32094171771169,0,0,0,0.299581278809645,0.457500602818626,1.25654352112864,3.30266208365325,4.60287823194595,0.41557608911912,1.46017136760982,17.5163705822544,3.85661608891288,0.758168275301024,2.31486041475121,13.2722851821958,11.7250073261071,12.4242869565691,18.2352829581215,15.8525043022594,13.5800543501941,13.0245397138023,4.39795730256327,6.68260778091811,9.26619792822314,11.4368230706567,7.45265490253754,8.61946472599353,11.4923214952315,9.26019613835746,8.55847347319521,0,0.257347907114715,0,10.1491628542396,11.0227248191115,10.8037236876609,15.6251525486239,13.5767319905709,18.5120535464854,19.0677834695334,24.4128795273653,25.2213139513086,20.4054213892716,8.70087559619205,8.99863785958999,11.1111990443253,9.22110484222413,11.4075455946316,1.89260953707715,3.60166143327496,0.330418782983798,2.3800550999719,13.0105832826493,18.1144604051142,10.8248667510558,8.67239155880373,8.2279876222602,8.75037880117772,8.0669940462567,7.74085087202851,9.29940272560997,9.74886713001639,7.60359939764569,2.69645822596266,4.10662294761919,5.37681437786791,5.12103332573321,7.76889885746156,9.01661885384643,7.127796474586,7.17624202520215,9.04752076585109,4.86921335856781,3.09981310757165,4.55296310739987,4.68909222902842,2.07516838961004,2.66952169145751,2.55526693647164,0.449724224769707,1.42002084971952,0.482354319504834,2.29163266603278,1.43848068725405,1.45921704097532,1.92192989231657,4.31304619582064,4.83783231969054,2.80833905803104,6.06189307073068,0.538192240565737,0.964887042726734,4.24932337383191,13.6433816474749,10.7556884451737,14.0888421193406,9.38760993154008,12.5629693081362,10.7119638398706,18.7328301943487,16.3940549870439,21.4820748959312,22.1642128433907,7.04612253277673,8.46156411142888,9.54683786637976,0,0,3.93411418415229,7.17435540392304,0.642202359951168,1.17211686592203,29.0164853316716,24.2372090116198,16.7219356290616,19.5219372148319,30.5901224780574,33.9335693092624,33.8653984605239,35.6676428793929,19.8357243820698,21.9191893433484,22.1361155650053,1.28528526568723,7.2389443456217,17.6284947630583,20.0350960004899,15.8371318053634,5.30980553359851,9.71122544619926,8.16273603804828,5.84675747243284,4.42952839321159,11.0676653259814,8.26970538138308,7.27067458955011,9.62542921638748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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:55983
|HGNC=
|TSSclassifier=NA
|UniProt=uniprot:Q69ZS0,uniprot:Q3UPS8
|association_with_transcript=-105bp_to_ENSMUST00000075994,NM_018884,uc009dcd.2,uc009dcf.1,uc012eps.1_5end
|cluster_id=chr6:101327996..101328010,-
|description=CAGE_peak_1_at_Pdzrn3_5end
|id=chr6:101327996..101328010,-
|ontology_enrichment_celltype=CL:0000107!3.03e-07!9
|ontology_enrichment_celltype_v019_2=CL:0000107,2.65e-07,9
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000468!3.77e-12!333;UBERON:0000922!1.13e-09!328;UBERON:0004535!6.98e-09!23;UBERON:0001009!6.98e-09!23;UBERON:0007100!2.55e-08!18;UBERON:0000948!2.55e-08!18;UBERON:0005498!2.55e-08!18;UBERON:0004140!2.55e-08!18;UBERON:0009881!2.55e-08!18;UBERON:0004141!2.55e-08!18;UBERON:0003084!2.55e-08!18;UBERON:0007005!2.55e-08!18;UBERON:0004139!2.55e-08!18;UBERON:0004291!2.55e-08!18;UBERON:0002410!3.03e-07!9;UBERON:0000010!5.33e-07!11
|ontology_enrichment_uberon_v019_2=UBERON:0004535,5.89e-09,23;UBERON:0001009,5.89e-09,23;UBERON:0007100,2.18e-08,18;UBERON:0000948,2.18e-08,18;UBERON:0005498,2.18e-08,18;UBERON:0004140,2.18e-08,18;UBERON:0009881,2.18e-08,18;UBERON:0004141,2.18e-08,18;UBERON:0003084,2.18e-08,18;UBERON:0007005,2.18e-08,18;UBERON:0004139,2.18e-08,18;UBERON:0004291,2.18e-08,18;UBERON:0002410,2.65e-07,9;UBERON:0000010,4.69e-07,11;UBERON:0000922,9.47e-07,320
|phase1_expression=11.8510146857548,0.697950815278722,0,0,0,0.33575854382378,0.233612640595526,0,0,0,0,0,0,0,0,0.404950534779652,0,0,0,0,3.656861476496,0,0,0,0,0,0,0.215471232685889,0.190023419456374,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,16.1147927008739,18.1464706882931,18.5382219683298,13.3006528539167,0.218025156380447,1.75748946187577,2.72201858703997,4.61955191363696,2.87505128729943,0,0,0,14.1492689819771,20.3438742356517,17.0171790451556,2.42779753031517,2.11596391708813,3.80298842103708,3.38844532069132,6.22506357277798,0,0.988866362566974,0,8.98800331555214,6.53171119046643,4.14758449233911,4.86021377994086,5.8890989178387,9.14083150092171,8.39300455616131,2.9397791811589,3.25874601462004,2.75765635983006,5.50579404996943,1.65993539510744,0.614426133024974,1.84640802822271,1.64677758484337,2.08365348222704,1.67509799400829,2.25105044012672,1.68078072554491,12.6690291753677,9.39653093274079,4.84638559145781,4.69502398665741,12.7715936580468,1.73918693221007,2.58127163094416,0.679971333707751,3.2382191498269,1.29955283489534,1.79210754838934,7.3031098468511,0,0,0,7.04217098883402,0,0,0,2.38140145112336,3.29367825117628,3.53867111510348,3.53970027129086,0.258937883647172,7.27366481417641,6.24547176358089,7.91610243611567,4.84292544237723,4.22023393547343,4.58595957829249,7.79132866243988,4.6967043869531,5.35017620603673,3.5384422077995,14.3972496453194,3.97514733228708,2.42437626567611,9.31958806090611,0,1.25668024088073,3.32094171771169,0,0,0,0.299581278809645,0.457500602818626,1.25654352112864,3.30266208365325,4.60287823194595,0.41557608911912,1.46017136760982,17.5163705822544,3.85661608891288,0.758168275301024,2.31486041475121,13.2722851821958,11.7250073261071,12.4242869565691,18.2352829581215,15.8525043022594,13.5800543501941,13.0245397138023,4.39795730256327,6.68260778091811,9.26619792822314,11.4368230706567,7.45265490253754,8.61946472599353,11.4923214952315,9.26019613835746,8.55847347319521,0,0.257347907114715,0,10.1491628542396,11.0227248191115,10.8037236876609,15.6251525486239,13.5767319905709,18.5120535464854,19.0677834695334,24.4128795273653,25.2213139513086,20.4054213892716,8.70087559619205,8.99863785958999,11.1111990443253,9.22110484222413,11.4075455946316,1.89260953707715,3.60166143327496,0.330418782983798,2.3800550999719,13.0105832826493,18.1144604051142,10.8248667510558,8.67239155880373,8.2279876222602,8.75037880117772,8.0669940462567,7.74085087202851,9.29940272560997,9.74886713001639,7.60359939764569,2.69645822596266,4.10662294761919,5.37681437786791,5.12103332573321,7.76889885746156,9.01661885384643,7.127796474586,7.17624202520215,9.04752076585109,4.86921335856781,3.09981310757165,4.55296310739987,4.68909222902842,2.07516838961004,2.66952169145751,2.55526693647164,0.449724224769707,1.42002084971952,0.482354319504834,2.29163266603278,1.43848068725405,1.45921704097532,1.92192989231657,4.31304619582064,4.83783231969054,2.80833905803104,6.06189307073068,0.538192240565737,0.964887042726734,4.24932337383191,13.6433816474749,10.7556884451737,14.0888421193406,9.38760993154008,12.5629693081362,10.7119638398706,18.7328301943487,16.3940549870439,21.4820748959312,22.1642128433907,7.04612253277673,8.46156411142888,9.54683786637976,0,0,3.93411418415229,7.17435540392304,0.642202359951168,1.17211686592203,29.0164853316716,24.2372090116198,16.7219356290616,19.5219372148319,30.5901224780574,33.9335693092624,33.8653984605239,35.6676428793929,19.8357243820698,21.9191893433484,22.1361155650053,1.28528526568723,7.2389443456217,17.6284947630583,20.0350960004899,15.8371318053634,5.30980553359851,9.71122544619926,8.16273603804828,5.84675747243284,4.42952839321159,11.0676653259814,8.26970538138308,7.27067458955011,9.62542921638748,7.9009189483954,6.32511651449993,5.15677716240934,0.340439605753788,17.4659261210371,9.31382523235832,11.7885369267376,5.85222771019503,8.74007206250146,6.2528627828806,7.91608867697958,5.16277757740163,2.1183207086382,2.64634077665954,9.8931751764888,9.20347232166662,10.5547618624273,15.3990323764046,14.4443991775654,4.66369338607761,1.48340241608408,0,9.90656966223468,6.48180845793991,0,0.136694227721025,1.14389086603261,0,0,0,5.72802370809068,12.811607740036,11.5892096262304,14.148699647656,13.381650944926,11.3548533148012,13.6212989848669,14.5470082076591,8.89970202745701,7.2584385043404,1.24267862617385,0,3.28936401296753,3.30916980914195,6.22243802700952,4.90807329215378,3.54807863530634,4.69428954583016,6.64042362704146,2.41176492179135,1.69108884578204,3.74439008135225,0.632022241256357,3.85177909051312,3.28675062927447,1.81889152168913,1.79026695667481,1.19208812868759,0.240390899039938,0.295379054349154,0.706765149637033,0.381034033274999,0.403304740547362,0.292373642219257,0.192423683280659,0.116876902181569,12.0167103316062,3.55177525398503,2.24284641523689,1.51096154727671,18.3530114330581,6.38120416534019,7.3260649706906,3.42989406526505,3.00943262421218,9.60078132449013,8.74617949363636,6.87474616127276,11.3423100346834,10.9613203163303,11.3309084608455,4.0501350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|short_description=p1@Pdzrn3
}}

Revision as of 20:48, 4 August 2015

Short description:p1@Pdzrn3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Pdzrn3_5end
Coexpression cluster:NA
Association with transcript: -105bp_to_ENSMUST00000075994, NM_018884, uc009dcd.2, uc009dcf.1, uc012eps.1_5end
EntrezGene:55983
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Pdzrn3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G711.85
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.70
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.40
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A33.66
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D816.11
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D918.15
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B318.54
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B713.30
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.76
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C32.72
Mouse Astrocytes, donor2.CNhs12078.11552-120C44.62
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C114.15
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E120.34
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C517.02
Mouse Granule cells, donor1.CNhs12131.11713-123C32.43
Mouse Granule cells, donor2.CNhs12357.11731-123E32.12
Mouse Granule cells, donor3.CNhs12108.11636-122C73.80
Mouse Meningeal cells, donor1.CNhs12132.11716-123C63.39
Mouse Meningeal cells, donor3.CNhs12109.11639-122D16.23
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C88.99
Mouse Microglia, donor2.CNhs12634.11736-123E86.53
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D54.15
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F54.86
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D95.89
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F19.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D58.39
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.94
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F23.26
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D62.76
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D35.51
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.66
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.61
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.85
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.65
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.08
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.68
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.25
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.68
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D612.67
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F69.40
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E14.85
Mouse Schwann, donor1.CNhs12507.11728-123D94.70
Mouse Schwann, donor2.CNhs12573.11746-123F912.77
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.74
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F72.58
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C83.24
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.30
Mouse hepatocyte, donor8.CNhs13091.11824-124F61.79
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A77.30
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G67.04
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G12.38
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G23.29
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G33.54
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B63.54
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D77.27
adrenal gland, embryo E14.CNhs11038.406-44C56.25
adrenal gland, embryo E16.CNhs11004.1254-43D67.92
adrenal gland, embryo E17.CNhs11043.1263-45I14.84
adrenal gland, embryo E18.CNhs11026.1262-18F54.22
adrenal gland, neonate N00.CNhs11191.1311-23C14.59
adrenal gland, neonate N25.CNhs11223.1377-27I37.79
amnion, adult pregnant day17.5.CNhs10488.583-22A84.70
aorta, adult.CNhs10498.46-23H15.35
bone (os femoris), adult.CNhs10483.56-12G23.54
bone (os femoris), neonate N02.CNhs11227.1985-43F514.40
bone (os femoris), neonate N16.CNhs11225.1525-43A63.98
bone (os femoris), neonate N20.CNhs11195.1350-25C32.42
cecum, adult.CNhs10467.37-13H49.32
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I21.26
colon, adult.CNhs10468.36-18H73.32
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.30
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F11.26
cortex, adult.CNhs10473.12-14D53.30
cortex, neonate N30.CNhs11107.1392-42F24.60
diencephalon, adult.CNhs10482.20-12F20.42
diencephalon, neonate N30.CNhs11201.1388-42B21.46
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B117.52
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A23.86
epididymis, adult.CNhs10490.58-23B20.76
eyeball, adult.CNhs10484.31-12G42.31
eyeball, embryo E12.CNhs11016.345-16C613.27
eyeball, embryo E14.CNhs10521.399-16E211.73
eyeball, embryo E15.CNhs10593.426-16C912.42
eyeball, embryo E17.CNhs11023.1261-18D418.24
eyeball, neonate N00.CNhs11207.633-15C615.85
eyeball, neonate N01.CNhs11140.1532-43E713.58
eyeball, neonate N02.CNhs11205.1551-44G813.02
eyeball, neonate N16.CNhs11188.777-19A24.40
forelimb, embryo E11.CNhs10596.335-25E26.68
forelimb, embryo E12.CNhs10600.359-14H29.27
forelimb, embryo E13.CNhs10589.384-1E211.44
forelimb, embryo E14.CNhs10577.413-26A87.45
forelimb, embryo E15.CNhs11007.437-20E78.62
forelimb, embryo E17.CNhs10598.1517-43C411.49
forelimb, embryo E18.CNhs11008.1520-43B59.26
gonad, embryo E13.CNhs11044.1564-45I68.56
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E910.15
heart, embryo E12.CNhs11015.353-12F511.02
heart, embryo E13.CNhs11013.376-3I910.80
heart, embryo E14.CNhs10597.403-26D415.63
heart, embryo E15.CNhs11017.431-16C813.58
heart, embryo E16.CNhs11021.457-17C618.51
heart, embryo E17.CNhs11025.479-18E519.07
heart, embryo E18.CNhs11030.1283-20G324.41
heart, neonate N00.CNhs11213.639-21E325.22
heart, neonate N03.CNhs11221.1349-25I220.41
heart, neonate N10.CNhs11118.749-24G18.70
heart, neonate N16.CNhs11209.782-15G19.00
heart, neonate N20.CNhs11127.821-26I611.11
heart, neonate N25.CNhs11196.1351-25D39.22
heart, neonate N30.CNhs11202.1390-42D211.41
hippocampus, adult.CNhs10478.13-16E81.89
hippocampus, neonate N00.CNhs11228.627-43G13.60
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A32.38
intestine, embryo E12.CNhs11019.1251-16I513.01
intestine, embryo E13.CNhs11010.381-16D518.11
intestine, embryo E15.CNhs10602.976-16D810.82
intestine, embryo E16.CNhs10585.463-22H48.67
intestine, embryo E17.CNhs10582.482-18D38.23
intestine, embryo E18.CNhs10526.1289-20F78.75
intestine, neonate N00.CNhs11126.644-26D18.07
intestine, neonate N01.CNhs11192.1322-23E97.74
intestine, neonate N06.CNhs11102.688-20B89.30
intestine, neonate N07.CNhs11095.720-20F29.75
intestine, neonate N10.CNhs11098.755-23A57.60
intestine, neonate N20.CNhs11187.827-18D12.70
intestine, neonate N25.CNhs11121.1352-25E34.11
intestine, neonate N30.CNhs11131.1384-42G15.38
kidney, embryo E14.CNhs10606.411-4I95.12
kidney, embryo E15.CNhs10997.434-16F87.77
kidney, embryo E16.CNhs10584.464-22A59.02
kidney, embryo E17.CNhs11028.483-18I27.13
kidney, embryo E18.CNhs11001.1288-20C77.18
kidney, neonate N00.CNhs11214.646-21G79.05
kidney, neonate N10.CNhs11206.758-6D54.87
kidney, neonate N20.CNhs11113.832-19I13.10
kidney, neonate N25.CNhs11122.1353-25F34.55
kidney, neonate N30.CNhs11203.1385-42H14.69
liver, adult pregnant day01.CNhs10466.508-5B22.08
liver, embryo E12.CNhs10601.355-15F82.67
liver, embryo E13.CNhs10524.378-3H62.56
liver, embryo E14.CNhs10594.409-16E10.45
liver, embryo E15.CNhs10520.433-16D71.42
liver, embryo E16.CNhs10523.462-17F50.48
liver, embryo E17.CNhs10510.481-18A32.29
liver, embryo E18.CNhs10579.499-43G41.44
liver, neonate N00.CNhs11117.641-24F41.46
liver, neonate N03.CNhs11123.1345-25G21.92
liver, neonate N06.CNhs11101.684-20A84.31
liver, neonate N07.CNhs11103.716-20H24.84
liver, neonate N10.CNhs11115.751-24B92.81
liver, neonate N20.CNhs11220.823-25A36.06
liver, neonate N25.CNhs11198.1368-26H10.54
liver, neonate N30.CNhs11106.1382-42D10.96
lung, adult.CNhs10474.28-22B14.25
lung, embryo E12.CNhs10522.354-16G213.64
lung, embryo E14.CNhs10604.404-26F810.76
lung, embryo E15.CNhs11020.432-17C514.09
lung, embryo E16.CNhs10998.458-17B69.39
lung, embryo E17.CNhs10605.480-44A612.56
lung, embryo E18.CNhs10583.1287-20I610.71
lung, neonate N00.CNhs11224.640-42C618.73
lung, neonate N06.CNhs11212.683-20E516.39
lung, neonate N07.CNhs11111.715-19A321.48
lung, neonate N10.CNhs11219.750-23E622.16
lung, neonate N20.CNhs11109.822-18A47.05
lung, neonate N25.CNhs11119.1359-25C78.46
lung, neonate N30.CNhs11133.1394-42H29.55
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B63.93
mammary gland, adult pregnant day19.CNhs10476.588-5H27.17
medulla oblongata, adult.CNhs10477.17-12C20.64
medulla oblongata, neonate N30.CNhs11200.1396-42A31.17
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C729.02
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C224.24
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E116.72
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E219.52
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E330.59
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D733.93
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D833.87
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D935.67
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D419.84
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D521.92
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D622.14
olfactory brain, adult.CNhs10489.18-22I91.29
ovary, adult.CNhs10507.91-2I77.24
ovary, embryo E18.CNhs11040.505-44H717.63
ovary, neonate N00.CNhs11217.1299-22I420.04
oviduct, adult pregnant day01.CNhs10500.988-6G615.84
pancreas, adult.CNhs10486.34-16E45.31
pancreas, embryo E14.CNhs11012.405-44F49.71
pancreas, embryo E15.CNhs11042.1556-45F28.16
pancreas, embryo E16.CNhs11003.460-26E55.85
pancreas, embryo E17.CNhs10599.1558-45G34.43
pancreas, embryo E18.CNhs10580.1535-43I711.07
pancreas, neonate N00.CNhs11105.645-26G98.27
pancreas, neonate N01.CNhs11138.1531-43D77.27
pancreas, neonate N02.CNhs11139.1539-43D89.63
pancreas, neonate N16.CNhs11136.787-43B67.90
pancreas, neonate N25.CNhs11094.1555-45E26.33
pancreas, neonate N30.CNhs11182.1548-44H55.16
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E617.47
pituitary gland, embryo E13.CNhs11009.370-44C79.31
pituitary gland, embryo E14.CNhs11037.398-44A511.79
pituitary gland, embryo E15.CNhs10592.427-16B95.85
pituitary gland, embryo E16.CNhs11036.449-43F68.74
pituitary gland, embryo E17.CNhs11039.1265-44F56.25
pituitary gland, neonate N00.CNhs11190.1308-22E97.92
placenta, adult pregnant day10.CNhs10472.539-13I75.16
placenta, adult pregnant day17.CNhs10464.577-18G32.12
prostate, adult.CNhs10470.859-1F82.65
skin, adult.CNhs10492.30-1C39.89
skin, neonate N00.CNhs11124.650-25G49.20
skin, neonate N03.CNhs11215.662-22H310.55
skin, neonate N06.CNhs11097.693-20I515.40
skin, neonate N10.CNhs11108.762-6C414.44
small intestine, neonate N16.CNhs11114.790-21I14.66
spinal cord, adult.CNhs10505.24-13C91.48
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C19.91
spleen, embryo E18.CNhs11011.1271-21F26.48
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G31.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H65.73
stomach, embryo E12.CNhs10588.356-43E312.81
stomach, embryo E15.CNhs10603.1252-16G811.59
stomach, embryo E16.CNhs11022.459-17D414.15
stomach, embryo E17.CNhs11006.1035-18D513.38
stomach, embryo E18.CNhs10999.1286-20C611.35
stomach, neonate N03.CNhs11193.1340-24B813.62
stomach, neonate N07.CNhs11210.718-18A914.55
stomach, neonate N25.CNhs11104.1355-25E48.90
stomach, neonate N30.CNhs11134.1386-42I17.26
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F53.29
testis, embryo E15.CNhs11034.443-27C53.31
testis, embryo E16.CNhs11033.470-26G56.22
testis, embryo E17.CNhs11029.486-18I54.91
testis, embryo E18.CNhs11027.503-18G53.55
testis, neonate N00.CNhs11189.1300-22B74.69
testis, neonate N07.CNhs11222.726-26I46.64
testis, neonate N10.CNhs11204.763-44D92.41
testis, neonate N20.CNhs11110.839-18H31.69
testis, neonate N30.CNhs11130.1391-42E23.74
thymus, adult.CNhs10471.38-12B50.63
thymus, embryo E14.CNhs11041.402-44I43.85
thymus, embryo E15.CNhs11005.430-45I23.29
thymus, embryo E16.CNhs11002.456-26C51.82
thymus, embryo E17.CNhs10581.478-18C11.79
thymus, embryo E18.CNhs10595.1273-19G41.19
thymus, neonate N02.CNhs11181.1541-43F80.24
thymus, neonate N03.CNhs11137.2104-43C70.30
thymus, neonate N06.CNhs11197.681-26C40.71
thymus, neonate N07.CNhs11211.713-19D30.38
thymus, neonate N10.CNhs11194.748-24E40.40
thymus, neonate N20.CNhs11186.820-7A20.29
thymus, neonate N25.CNhs11125.1362-25G70.19
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B412.02
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H33.55
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F72.24
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.51
urinary bladder, adult.CNhs10481.879-12E418.35
uterus, adult pregnant day19.CNhs10497.590-15F56.38
uterus, adult.CNhs10509.92-27E57.33
vagina, adult.CNhs10502.89-27D53.43
vesicular gland, adult.CNhs10491.51-27F83.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A19.60
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A28.75
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A36.87
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D711.34
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A410.96
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A511.33
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.05
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A75.85
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A87.70
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A95.70
whole body, embryo E11.CNhs11014.324-5I810.17
whole body, embryo E12.CNhs10587.857-27C913.97
whole body, embryo E13.CNhs10512.372-23H28.71
whole body, embryo E14.5.CNhs10578.420-27D27.29
whole body, embryo E14.CNhs10519.395-14B15.66
whole body, embryo E16.CNhs10514.453-14F27.17
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G58.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G57.01
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G57.38
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G510.36
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G512.17
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G58.49
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G59.55
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G59.28
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G59.19
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G59.05
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G513.67
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G511.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G511.13
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G59.13
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G58.91
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G511.71
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G58.58
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G510.61
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G59.88
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G59.48
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G59.51
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G59.73
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G58.83
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.81
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G58.19
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G511.62
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G58.18
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G58.99
whole body, embryo E17.5.CNhs10513.490-9F98.68
whole body, embryo E17.CNhs10517.475-3I57.49
whole body, embryo E18.CNhs10516.493-3B38.89
whole body, neonate N00.CNhs10525.657-19C27.31
whole body, neonate N01.CNhs10576.659-23C69.56
whole body, neonate N06.CNhs10515.692-21D17.06
whole body, neonate N10.CNhs10518.761-6B49.51





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
autonomic neuron2.65e-079

Uber anatomy
Ontology termp-valuen
cardiovascular system5.89e-0923
circulatory system5.89e-0923
primary circulatory organ2.18e-0818
heart2.18e-0818
primitive heart tube2.18e-0818
primary heart field2.18e-0818
anterior lateral plate mesoderm2.18e-0818
heart tube2.18e-0818
heart primordium2.18e-0818
cardiac mesoderm2.18e-0818
cardiogenic plate2.18e-0818
heart rudiment2.18e-0818
autonomic nervous system2.65e-079
peripheral nervous system4.69e-0711
embryo9.47e-07320
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