FFCP PHASE1:Mm9::chr6:72047397..72047412,+: Difference between revisions
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{{FFCP|EntrezGene=20454|HGNC=|MCL_coexpression_id=15|UniProt=O88829|association_with_transcript=-194bp_to_ENSMUST00000069994,ENSMUST00000114112,NM_001035228,NM_011375,uc009chy.1,uc009chz.1_5end|description=CAGE_peak_8_at_St3gal5_5end|id=chr6:72047397..72047412,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002027,1.12e-10,3;CL:0002006,1.12e-10,3;CL:0002024,1.12e-10,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005172!1.63e-08!49;UBERON:0005173!1.63e-08!49;UBERON:0002417!1.63e-08!49;UBERON:0000916!1.63e-08!49|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.09e-15,22;UBERON:0007499,1.09e-15,22;UBERON:0006925,1.09e-15,22;UBERON:0009497,1.09e-15,22;UBERON:0000015,1.09e-15,22;UBERON:0002423,1.09e-15,22;UBERON:0006235,1.09e-15,22;UBERON:0008835,1.09e-15,22;UBERON:0003894,1.09e-15,22;UBERON:0004161,1.09e-15,22;UBERON:0008836,1.09e-15,22;UBERON:0009854,6.51e-15,23;UBERON:0009856,6.51e-15,23;UBERON:0005172,1.24e-13,49;UBERON:0005173,1.24e-13,49;UBERON:0002417,1.24e-13,49;UBERON:0000916,1.24e-13,49;UBERON:0002365,1.50e-13,25;UBERON:0002330,1.50e-13,25;UBERON:0002106,1.58e-13,6;UBERON:0004457,1.58e-13,6;UBERON:0000042,1.58e-13,6;UBERON:0004854,1.58e-13,6;UBERON:0009034,1.58e-13,6;UBERON:0002095,1.58e-13,6;UBERON:0004782,1.58e-13,6;UBERON:0003281,1.58e-13,6;UBERON:0009664,1.58e-13,6;UBERON:0002296,1.58e-13,6;UBERON:0005602,1.58e-13,6;UBERON:0001179,1.58e-13,6;UBERON:0006293,1.58e-13,6;UBERON:0009569,2.93e-09,66;UBERON:0003887,5.42e-08,10;UBERON:0000981,1.94e-07,4;UBERON:0003608,1.94e-07,4;UBERON:0003826,1.94e-07,4;UBERON:0008202,1.94e-07,4;UBERON:0004381,1.94e-07,4;UBERON:0007273,1.94e-07,4;UBERON:0010912,1.94e-07,4;UBERON:0002513,1.94e-07,4;UBERON:0004375,1.94e-07,4;UBERON:0010740,1.94e-07,4;UBERON:0010363,1.94e-07,4;UBERON:0003860,1.94e-07,4;UBERON:0002428,1.94e-07,4;UBERON:0010742,1.94e-07,4;UBERON:0002495,1.94e-07,4;UBERON:0003464,1.94e-07,4;UBERON:0003606,1.94e-07,4;UBERON:0005893,1.94e-07,4;UBERON:0009749,1.94e-07,4;UBERON:0010712,1.94e-07,4;UBERON:0010886,1.94e-07,4;UBERON:0005254,1.94e-07,4;UBERON:0010885,1.94e-07,4;UBERON:0010881,1.94e-07,4;UBERON:0010882,1.94e-07,4;UBERON:0007844,1.94e-07,4;UBERON:0001441,1.94e-07,4;UBERON:0011249,1.94e-07,4;UBERON:0002091,1.94e-07,4;UBERON:0003285,1.94e-07,4;UBERON:0004288,1.94e-07,4;UBERON:0010129,1.94e-07,4;UBERON:0006234,1.94e-07,4;UBERON:0003104,2.04e-07,61;UBERON:0009142,2.04e-07,61;UBERON:0005177,3.40e-07,79;UBERON:0001041,4.59e-07,80|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.99798785634096,9.51633756732182,6.99561878128147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27006134691926,0,0,0,0,0,0,0,0,0.588231488031014,0,0,0,0.101376931219515,0,0,0,0.439372365468944,0,0,0,0,0,0,0,0,0,0,0,0,0.338844532069132,0,0,0,0,0,0,0,0,0.210324961351382,0,0,0,0,0,1.10115880999389,0,0,0,0,0,0,0.56276261003168,0,0,0,0,0,0,1.44932244350839,0,1.3599426674155,0,0,0,1.26399978118577,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0.445326417194474,0.346970653532272,0.304465478312141,0.461230994512117,0.150722640552623,0.352766121407114,0.125666591329675,0,0,4.42305275974937,0.647067399789637,1.32504911076236,2.42437626567611,0,0.292780797011547,0,0,0,0,0,0,0,0,0,0,0,0,0,0.746441823660558,0,0,0,0,0,0.30140963567143,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0,0,0,0.0810688095458557,0.146199987425332,0,0,0,0,0,0,0.213288250535234,0.232236671860439,0.128867461322093,0,0.22237804384487,0,0,0.329397909448022,0.502670417600539,0.198956472041151,0.779856348476481,0,0,0,0,0.342745537829186,0,0,0,0,0,0.147610147979602,0,0,0,3.67059232575407,4.71741588271687,4.49724224769707,8.11440485554012,11.0941493486112,6.62027214631691,4.89083433666378,3.24270453550071,0.823684239564244,1.43768206527355,0.744281895337007,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0.195133647857799,0,0.221464689648775,0,0.327726629431476,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0.709700426041343,0,0.325773918707152,0,0,0,0.302323556964751,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0.291480836629851,0,3.58828849675491,0,1.66675074632741,7.72310673719233,3.2806614653046,8.69357058184786,0,0,0,0,0,0.406638934253697,0.108005340821801,0.209088296014469,0,0.269728692769641,0.247960367176008,0,0,0,0,0.149516546043979,0.330916980914195,0,0,0,0.117357238645754,0,0.314578033277133,0.241584120826006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341467211508268,1.45864030240976,0.628839487883947,0.367687016900028,0.44449345560323,0.206035057238894,0.64183841918363,0.505394423527595,0.25347929989024,0.565879024158229,0.280924522409647,0.576226371643824,0.229741875822453,0,0.811190281613988,0,0.412085900803307,1.47198920134397,0.685738504770831,0.354951612318675,0.715308569841963,0.872078499793971,0.564656282491984,0.25384382367503,0.365855945745545,0.526139422875686,0.679020569229309,1.12228454331548,0.355905054372522,0.591026894253381,0,0.309873682371932,0.578719832943424,0,0.467863216890817,0.214871054048298,0,0.882365676478062,1.62307484934295|short_description=p8@St3gal5}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:20454 | |||
|HGNC= | |||
|MCL_coexpression_id=15 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:O88829 | |||
|association_with_transcript=-194bp_to_ENSMUST00000069994,ENSMUST00000114112,NM_001035228,NM_011375,uc009chy.1,uc009chz.1_5end | |||
|cluster_id=chr6:72047397..72047412,+ | |||
|description=CAGE_peak_8_at_St3gal5_5end | |||
|id=chr6:72047397..72047412,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002027,1.12e-10,3;CL:0002006,1.12e-10,3;CL:0002024,1.12e-10,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005172!1.63e-08!49;UBERON:0005173!1.63e-08!49;UBERON:0002417!1.63e-08!49;UBERON:0000916!1.63e-08!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.09e-15,22;UBERON:0007499,1.09e-15,22;UBERON:0006925,1.09e-15,22;UBERON:0009497,1.09e-15,22;UBERON:0000015,1.09e-15,22;UBERON:0002423,1.09e-15,22;UBERON:0006235,1.09e-15,22;UBERON:0008835,1.09e-15,22;UBERON:0003894,1.09e-15,22;UBERON:0004161,1.09e-15,22;UBERON:0008836,1.09e-15,22;UBERON:0009854,6.51e-15,23;UBERON:0009856,6.51e-15,23;UBERON:0005172,1.24e-13,49;UBERON:0005173,1.24e-13,49;UBERON:0002417,1.24e-13,49;UBERON:0000916,1.24e-13,49;UBERON:0002365,1.50e-13,25;UBERON:0002330,1.50e-13,25;UBERON:0002106,1.58e-13,6;UBERON:0004457,1.58e-13,6;UBERON:0000042,1.58e-13,6;UBERON:0004854,1.58e-13,6;UBERON:0009034,1.58e-13,6;UBERON:0002095,1.58e-13,6;UBERON:0004782,1.58e-13,6;UBERON:0003281,1.58e-13,6;UBERON:0009664,1.58e-13,6;UBERON:0002296,1.58e-13,6;UBERON:0005602,1.58e-13,6;UBERON:0001179,1.58e-13,6;UBERON:0006293,1.58e-13,6;UBERON:0009569,2.93e-09,66;UBERON:0003887,5.42e-08,10;UBERON:0000981,1.94e-07,4;UBERON:0003608,1.94e-07,4;UBERON:0003826,1.94e-07,4;UBERON:0008202,1.94e-07,4;UBERON:0004381,1.94e-07,4;UBERON:0007273,1.94e-07,4;UBERON:0010912,1.94e-07,4;UBERON:0002513,1.94e-07,4;UBERON:0004375,1.94e-07,4;UBERON:0010740,1.94e-07,4;UBERON:0010363,1.94e-07,4;UBERON:0003860,1.94e-07,4;UBERON:0002428,1.94e-07,4;UBERON:0010742,1.94e-07,4;UBERON:0002495,1.94e-07,4;UBERON:0003464,1.94e-07,4;UBERON:0003606,1.94e-07,4;UBERON:0005893,1.94e-07,4;UBERON:0009749,1.94e-07,4;UBERON:0010712,1.94e-07,4;UBERON:0010886,1.94e-07,4;UBERON:0005254,1.94e-07,4;UBERON:0010885,1.94e-07,4;UBERON:0010881,1.94e-07,4;UBERON:0010882,1.94e-07,4;UBERON:0007844,1.94e-07,4;UBERON:0001441,1.94e-07,4;UBERON:0011249,1.94e-07,4;UBERON:0002091,1.94e-07,4;UBERON:0003285,1.94e-07,4;UBERON:0004288,1.94e-07,4;UBERON:0010129,1.94e-07,4;UBERON:0006234,1.94e-07,4;UBERON:0003104,2.04e-07,61;UBERON:0009142,2.04e-07,61;UBERON:0005177,3.40e-07,79;UBERON:0001041,4.59e-07,80 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.99798785634096,9.51633756732182,6.99561878128147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27006134691926,0,0,0,0,0,0,0,0,0.588231488031014,0,0,0,0.101376931219515,0,0,0,0.439372365468944,0,0,0,0,0,0,0,0,0,0,0,0,0.338844532069132,0,0,0,0,0,0,0,0,0.210324961351382,0,0,0,0,0,1.10115880999389,0,0,0,0,0,0,0.56276261003168,0,0,0,0,0,0,1.44932244350839,0,1.3599426674155,0,0,0,1.26399978118577,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0.445326417194474,0.346970653532272,0.304465478312141,0.461230994512117,0.150722640552623,0.352766121407114,0.125666591329675,0,0,4.42305275974937,0.647067399789637,1.32504911076236,2.42437626567611,0,0.292780797011547,0,0,0,0,0,0,0,0,0,0,0,0,0,0.746441823660558,0,0,0,0,0,0.30140963567143,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0,0,0,0.0810688095458557,0.146199987425332,0,0,0,0,0,0,0.213288250535234,0.232236671860439,0.128867461322093,0,0.22237804384487,0,0,0.329397909448022,0.502670417600539,0.198956472041151,0.779856348476481,0,0,0,0,0.342745537829186,0,0,0,0,0,0.147610147979602,0,0,0,3.67059232575407,4.71741588271687,4.49724224769707,8.11440485554012,11.0941493486112,6.62027214631691,4.89083433666378,3.24270453550071,0.823684239564244,1.43768206527355,0.744281895337007,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0.195133647857799,0,0.221464689648775,0,0.327726629431476,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0.709700426041343,0,0.325773918707152,0,0,0,0.302323556964751,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0.291480836629851,0,3.58828849675491,0,1.66675074632741,7.72310673719233,3.2806614653046,8.69357058184786,0,0,0,0,0,0.406638934253697,0.108005340821801,0.209088296014469,0,0.269728692769641,0.247960367176008,0,0,0,0,0.149516546043979,0.330916980914195,0,0,0,0.117357238645754,0,0.314578033277133,0.241584120826006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341467211508268,1.45864030240976,0.628839487883947,0.367687016900028,0.44449345560323,0.206035057238894,0.64183841918363,0.505394423527595,0.25347929989024,0.565879024158229,0.280924522409647,0.576226371643824,0.229741875822453,0,0.811190281613988,0,0.412085900803307,1.47198920134397,0.685738504770831,0.354951612318675,0.715308569841963,0.872078499793971,0.564656282491984,0.25384382367503,0.365855945745545,0.526139422875686,0.679020569229309,1.12228454331548,0.355905054372522,0.591026894253381,0,0.309873682371932,0.578719832943424,0,0.467863216890817,0.214871054048298,0,0.882365676478062,1.62307484934295 | |||
|short_description=p8@St3gal5 | |||
}} |
Revision as of 02:21, 6 August 2015
Short description: | p8@St3gal5 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_St3gal5_5end |
Coexpression cluster: | MCL_coexpression_mm9:15 |
Association with transcript: | -194bp_to_ENSMUST00000069994, ENSMUST00000114112, NM_001035228, NM_011375, uc009chy.1, uc009chz.1_5end |
EntrezGene: | 20454 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD9-positive, CD41-positive megakaryocyte cell | 1.12e-10 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 1.12e-10 | 3 |
Kit-positive megakaryocyte progenitor cell | 1.12e-10 | 3 |