FFCP PHASE1:Hg19::chrX:48114805..48114830,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=6756 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11335 | |||
|TSSclassifier=weak | |||
|UniProt=Q16384 | |||
|association_with_transcript=8bp_to_NM_005635,uc004djb.1_5end | |||
|coexpression_cluster_id=C52 | |||
|description=CAGE_peak_1_at_SSX1_5end | |||
|id=chrX:48114805..48114830,+ | |||
|ontology_enrichment_celltype=CL:0002127!1.25e-13!1;CL:0000914!1.25e-13!1;CL:0000911!1.25e-13!1;CL:0000814!1.25e-13!1;CL:0002042!1.25e-13!1;CL:0002039!1.25e-13!1;CL:0002040!1.25e-13!1;CL:0002041!1.25e-13!1;CL:1001319!1.83e-13!1;CL:1000600!1.83e-13!1;CL:1000415!1.36e-07!2;CL:0000893!1.87e-07!2;CL:0002489!1.87e-07!2;CL:0000809!1.87e-07!2;CL:0000808!1.87e-07!2;CL:0000894!1.87e-07!2;CL:0000806!1.87e-07!2;CL:0000807!1.87e-07!2;CL:0000805!1.87e-07!2;CL:0002425!1.87e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:1000415;1.46e-13;2 | |||
|ontology_enrichment_celltype_v019_2=CL:1000415,1.37e-13,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1036!8.79e-15!8;DOID:2531!2.03e-11!51;DOID:0060083!2.03e-11!51;DOID:1240!2.85e-11!39;DOID:4231!1.99e-07!2;DOID:1907!1.99e-07!2;DOID:162!2.83e-07!235;DOID:14566!4.36e-07!239 | |||
|ontology_enrichment_disease_v019=DOID:1036;2.50e-28;8!DOID:1240;6.05e-10;39!DOID:8692;4.38e-08;31 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,2.87e-28,8;DOID:1240,1.32e-10,39;DOID:2531,3.33e-08,51;DOID:0060083,3.33e-08,51;DOID:8692,7.90e-08,31 | |||
|ontology_enrichment_uberon=UBERON:0007195!5.15e-14!1;UBERON:0001282!9.73e-14!1;UBERON:0009842!9.73e-14!1;UBERON:0003704!9.73e-14!1;UBERON:0001171!9.73e-14!1;UBERON:0001172!9.73e-14!1;UBERON:0004645!1.83e-13!1;UBERON:0001256!1.83e-13!1;UBERON:0001259!1.83e-13!1;UBERON:0002294!4.58e-08!7;UBERON:0001173!4.58e-08!7;UBERON:0004912!4.58e-08!7;UBERON:0001255!2.25e-07!2;UBERON:0001556!2.25e-07!2;UBERON:0000473!4.69e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0007195;6.72e-26;1!UBERON:0002110;1.74e-09;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007195,5.93e-26,1;UBERON:0002110,1.67e-09,3;UBERON:0006242,1.67e-09,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224170287987055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.835218521685727,0,0,0,0,8.04704323755345,0,0,13.2617627290199,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.44547960578548,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.455768223388005,0,0,0,0,0,0,0,0,0,6.09108283666388,4.11731322067253,2.68514539161348,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.44097045839729,0,0,0,2.96587634930675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0.267964130156178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@SSX1 | |||
}} |
Revision as of 05:33, 23 January 2014
Short description: | p1@SSX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_SSX1_5end |
Coexpression cluster: | C52_adult_NK_chronic_cord_testis_embryonic_myeloma |
Association with transcript: | 8bp_to_NM_005635, uc004djb.1_5end |
EntrezGene: | SSX1 |
HGNC: | 11335 |
UniProt: | Q16384 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of gall bladder | 1.37e-13 | 2 |
Ontology term | p-value | n |
---|---|---|
stroma of bone marrow | 5.93e-26 | 1 |
gallbladder | 1.67e-09 | 3 |
gall bladder primordium | 1.67e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 2.87e-28 | 8 |
leukemia | 1.32e-10 | 39 |
hematologic cancer | 3.33e-08 | 51 |
immune system cancer | 3.33e-08 | 51 |
myeloid leukemia | 7.90e-08 | 31 |