FFCP PHASE1:Mm9::chr7:147279287..147279301,+: Difference between revisions
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{{FFCP|EntrezGene=22264|HGNC=|MCL_coexpression_id=106|UniProt=Q80XD8|association_with_transcript=0bp_to_ENSMUST00000026540,NM_009475,uc009kgt.2_5end|description=CAGE_peak_1_at_Prap1_5end|id=chr7:147279287..147279301,+|ontology_enrichment_celltype=CL:0002563!2.80e-08!9;CL:0002251!2.80e-08!9|ontology_enrichment_celltype_v019_2=CL:0002563,7.18e-10,9;CL:0002251,7.18e-10,9;CL:0000239,1.88e-07,6;CL:0000677,1.88e-07,6;CL:0000584,1.88e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!4.50e-16!43;UBERON:0005409!5.09e-16!59;UBERON:0000344!3.37e-13!15;UBERON:0001242!1.81e-11!13;UBERON:0000060!1.81e-11!13;UBERON:0001262!1.81e-11!13;UBERON:0004786!1.81e-11!13;UBERON:0004923!4.20e-10!24;UBERON:0004119!7.05e-10!130;UBERON:0000925!7.05e-10!130;UBERON:0006595!7.05e-10!130;UBERON:0001007!4.81e-09!128;UBERON:0001555!4.81e-09!128;UBERON:0007026!4.81e-09!128;UBERON:0003350!2.80e-08!9;UBERON:0004808!2.80e-08!9;UBERON:0001277!2.80e-08!9;UBERON:0004921!4.48e-08!126;UBERON:0004185!4.48e-08!126|ontology_enrichment_uberon_v019_2=UBERON:0000160,5.99e-26,31;UBERON:0005409,1.23e-22,47;UBERON:0000344,5.97e-16,15;UBERON:0001242,8.25e-14,13;UBERON:0001262,8.25e-14,13;UBERON:0004786,8.25e-14,13;UBERON:0004923,6.25e-12,24;UBERON:0003350,7.18e-10,9;UBERON:0004808,7.18e-10,9;UBERON:0001277,7.18e-10,9;UBERON:0004119,6.78e-09,118;UBERON:0000925,6.78e-09,118;UBERON:0006595,6.78e-09,118;UBERON:0001007,5.28e-08,116;UBERON:0001555,5.28e-08,116;UBERON:0007026,5.28e-08,116;UBERON:0000474,1.41e-07,9;UBERON:0000485,1.49e-07,11;UBERON:0004921,5.60e-07,114;UBERON:0003134,8.14e-07,8|phase1_expression=0,4063.12067114508,5391.28598752661,2965.66159186347,3269.34642935981,414.82968089428,523.058702293382,0,0,0,0,0,0,0,0,0,0,0,0,0,171.192143074103,0,0,3096.81333558918,3045.86702472882,3772.12977227157,3006.71873319034,2109.24789676217,2373.58253242957,1509.15641700247,701.333605202729,0,0,0,477.471727448857,562.538039893138,395.271873723947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135005938331691,0,0,0,0,0.0958454710182364,0,0,0,0,0,0.274462930807229,0,0,0,0,0,0,0,0.151452386666368,0,0,0,0,0,0,0,266.703953830197,0,0,0,0,0,0,0,0,0,0,496.699876777911,0,0,0,0,0.230615497256059,0,0,29.9086487364628,290.206892120155,0,0,0,0,0,123.018562403961,0,0.209446706813455,2213.53538338244,0,0,0,0,0,0,0,0,0,0,0.916554274652847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219195732427575,0,0,0,0,0,0,0,0,4.69052119962192,0,0,0.196764231747404,0,0,0,0,0,0,0,0,0,0,0,0,20133.4077035518,2057.42540864237,0,0.464473343720877,50.5160448382606,262.188582010345,491.233098853319,904.713077791331,2293.39895444462,1985.93999606212,958.341151155428,1043.92460879992,878.508176558755,1586.4162562747,1453.96066150707,3393.16815498116,0,0.228497025219458,0,0,0,0.420814919341911,0,0,0.156998727841375,0,0.296452627087149,0,0.786235980452812,0,0.202860121388503,0.241177159752417,6.87489799809833,0.287696137450811,0,0,0,0,0,0.757736633841335,1.61457672169721,0,0,0.37898282354097,0,2.54617628662782,0,0,0,0.390267295715598,0,0,0,0.163863314715738,0,0,0,0,0,0,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0,53.0855918678925,11.5742642383716,5.21238269931443,328.125574592373,0,0,8.76738315197778,0,0,0.307435147943927,466.463069168639,0.363533729477506,0,0,0,0,0,0,0.258717367565509,0,0,0,0,0,392.13642417446,70.5400795976521,0,0,0,0,0,0,1811.84488049115,0.18542530201051,0,0,0.370389054739423,0,0,0,0,0,0,24.821436068393,0.158167996790568,6.70954241518601,78.9519041407367,27.8087433699243,151.106894112355,12.9469772529428,28.1848284023396,0,57.8082780881396,0,0.56369293868419,0.448549638131936,0.496375471371293,0,0,0,0,0,0,0,0,1.26404448251271,0,0,0,0.179026695667481,0.198681354781265,1.08175904567972,1.32920574457119,1.00966449948148,0.762068066549998,1.20991422164209,2.14407337627455,2.02044867444692,2.80504565235765,0.226730383615211,0,0,0,0.772758376128762,44219.868041053,1856.60801519727,91.3209294876821,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0.399024873401031,0.170733605754134,3.16038732188782,1.67690530102386,8.82448840560068,65.3405379736749,63.2527625723405,69.9603876910157,65.9539722703511,65.3976593716819,48.4769697362216,53.8438667951824,53.0128261912318,52.1514058116968,46.2004880544581,40.2118611028649,46.2982129112892,52.3349094020199,42.3932889987064,51.0875186054269,59.9868224818561,58.655302727041,61.9175734853719,57.0302845316903,59.3148401320652,61.097942939506,52.8770119990064,53.099408513732,41.5245281026726,45.5558469596829,42.1599184567412,48.698494137193,43.2273786908845,29.1288982581524,0,51.6988854664353,65.3208004306827,0,0.220591419119515,0|short_description=p1@Prap1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:22264 | |||
|HGNC= | |||
|MCL_coexpression_id=106 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q80XD8 | |||
|association_with_transcript=0bp_to_ENSMUST00000026540,NM_009475,uc009kgt.2_5end | |||
|cluster_id=chr7:147279287..147279301,+ | |||
|description=CAGE_peak_1_at_Prap1_5end | |||
|id=chr7:147279287..147279301,+ | |||
|ontology_enrichment_celltype=CL:0002563!2.80e-08!9;CL:0002251!2.80e-08!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,7.18e-10,9;CL:0002251,7.18e-10,9;CL:0000239,1.88e-07,6;CL:0000677,1.88e-07,6;CL:0000584,1.88e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!4.50e-16!43;UBERON:0005409!5.09e-16!59;UBERON:0000344!3.37e-13!15;UBERON:0001242!1.81e-11!13;UBERON:0000060!1.81e-11!13;UBERON:0001262!1.81e-11!13;UBERON:0004786!1.81e-11!13;UBERON:0004923!4.20e-10!24;UBERON:0004119!7.05e-10!130;UBERON:0000925!7.05e-10!130;UBERON:0006595!7.05e-10!130;UBERON:0001007!4.81e-09!128;UBERON:0001555!4.81e-09!128;UBERON:0007026!4.81e-09!128;UBERON:0003350!2.80e-08!9;UBERON:0004808!2.80e-08!9;UBERON:0001277!2.80e-08!9;UBERON:0004921!4.48e-08!126;UBERON:0004185!4.48e-08!126 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,5.99e-26,31;UBERON:0005409,1.23e-22,47;UBERON:0000344,5.97e-16,15;UBERON:0001242,8.25e-14,13;UBERON:0001262,8.25e-14,13;UBERON:0004786,8.25e-14,13;UBERON:0004923,6.25e-12,24;UBERON:0003350,7.18e-10,9;UBERON:0004808,7.18e-10,9;UBERON:0001277,7.18e-10,9;UBERON:0004119,6.78e-09,118;UBERON:0000925,6.78e-09,118;UBERON:0006595,6.78e-09,118;UBERON:0001007,5.28e-08,116;UBERON:0001555,5.28e-08,116;UBERON:0007026,5.28e-08,116;UBERON:0000474,1.41e-07,9;UBERON:0000485,1.49e-07,11;UBERON:0004921,5.60e-07,114;UBERON:0003134,8.14e-07,8 | |||
|phase1_expression=0,4063.12067114508,5391.28598752661,2965.66159186347,3269.34642935981,414.82968089428,523.058702293382,0,0,0,0,0,0,0,0,0,0,0,0,0,171.192143074103,0,0,3096.81333558918,3045.86702472882,3772.12977227157,3006.71873319034,2109.24789676217,2373.58253242957,1509.15641700247,701.333605202729,0,0,0,477.471727448857,562.538039893138,395.271873723947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135005938331691,0,0,0,0,0.0958454710182364,0,0,0,0,0,0.274462930807229,0,0,0,0,0,0,0,0.151452386666368,0,0,0,0,0,0,0,266.703953830197,0,0,0,0,0,0,0,0,0,0,496.699876777911,0,0,0,0,0.230615497256059,0,0,29.9086487364628,290.206892120155,0,0,0,0,0,123.018562403961,0,0.209446706813455,2213.53538338244,0,0,0,0,0,0,0,0,0,0,0.916554274652847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219195732427575,0,0,0,0,0,0,0,0,4.69052119962192,0,0,0.196764231747404,0,0,0,0,0,0,0,0,0,0,0,0,20133.4077035518,2057.42540864237,0,0.464473343720877,50.5160448382606,262.188582010345,491.233098853319,904.713077791331,2293.39895444462,1985.93999606212,958.341151155428,1043.92460879992,878.508176558755,1586.4162562747,1453.96066150707,3393.16815498116,0,0.228497025219458,0,0,0,0.420814919341911,0,0,0.156998727841375,0,0.296452627087149,0,0.786235980452812,0,0.202860121388503,0.241177159752417,6.87489799809833,0.287696137450811,0,0,0,0,0,0.757736633841335,1.61457672169721,0,0,0.37898282354097,0,2.54617628662782,0,0,0,0.390267295715598,0,0,0,0.163863314715738,0,0,0,0,0,0,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0,53.0855918678925,11.5742642383716,5.21238269931443,328.125574592373,0,0,8.76738315197778,0,0,0.307435147943927,466.463069168639,0.363533729477506,0,0,0,0,0,0,0.258717367565509,0,0,0,0,0,392.13642417446,70.5400795976521,0,0,0,0,0,0,1811.84488049115,0.18542530201051,0,0,0.370389054739423,0,0,0,0,0,0,24.821436068393,0.158167996790568,6.70954241518601,78.9519041407367,27.8087433699243,151.106894112355,12.9469772529428,28.1848284023396,0,57.8082780881396,0,0.56369293868419,0.448549638131936,0.496375471371293,0,0,0,0,0,0,0,0,1.26404448251271,0,0,0,0.179026695667481,0.198681354781265,1.08175904567972,1.32920574457119,1.00966449948148,0.762068066549998,1.20991422164209,2.14407337627455,2.02044867444692,2.80504565235765,0.226730383615211,0,0,0,0.772758376128762,44219.868041053,1856.60801519727,91.3209294876821,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0.399024873401031,0.170733605754134,3.16038732188782,1.67690530102386,8.82448840560068,65.3405379736749,63.2527625723405,69.9603876910157,65.9539722703511,65.3976593716819,48.4769697362216,53.8438667951824,53.0128261912318,52.1514058116968,46.2004880544581,40.2118611028649,46.2982129112892,52.3349094020199,42.3932889987064,51.0875186054269,59.9868224818561,58.655302727041,61.9175734853719,57.0302845316903,59.3148401320652,61.097942939506,52.8770119990064,53.099408513732,41.5245281026726,45.5558469596829,42.1599184567412,48.698494137193,43.2273786908845,29.1288982581524,0,51.6988854664353,65.3208004306827,0,0.220591419119515,0 | |||
|short_description=p1@Prap1 | |||
}} |
Revision as of 11:27, 4 August 2015
Short description: | p1@Prap1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Prap1_5end |
Coexpression cluster: | MCL_coexpression_mm9:106 |
Association with transcript: | 0bp_to_ENSMUST00000026540, NM_009475, uc009kgt.2_5end |
EntrezGene: | 22264 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 7.18e-10 | 9 |
epithelial cell of alimentary canal | 7.18e-10 | 9 |
brush border epithelial cell | 1.88e-07 | 6 |
gut absorptive cell | 1.88e-07 | 6 |
enterocyte | 1.88e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
intestine | 5.99e-26 | 31 |
gastrointestinal system | 1.23e-22 | 47 |
mucosa | 5.97e-16 | 15 |
intestinal mucosa | 8.25e-14 | 13 |
wall of intestine | 8.25e-14 | 13 |
gastrointestinal system mucosa | 8.25e-14 | 13 |
organ component layer | 6.25e-12 | 24 |
epithelium of mucosa | 7.18e-10 | 9 |
gastrointestinal system epithelium | 7.18e-10 | 9 |
intestinal epithelium | 7.18e-10 | 9 |
endoderm-derived structure | 6.78e-09 | 118 |
endoderm | 6.78e-09 | 118 |
presumptive endoderm | 6.78e-09 | 118 |
digestive system | 5.28e-08 | 116 |
digestive tract | 5.28e-08 | 116 |
primitive gut | 5.28e-08 | 116 |
female reproductive system | 1.41e-07 | 9 |
simple columnar epithelium | 1.49e-07 | 11 |
subdivision of digestive tract | 5.60e-07 | 114 |
female reproductive organ | 8.14e-07 | 8 |