FFCP PHASE1:Mm9::chr7:52963269..52963305,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=13170|HGNC=|UniProt=|association_with_transcript=10bp_to_ENSMUST00000155439_5end|description=CAGE_peak_4_at_Dbp_5end|id=chr7:52963269..52963305,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0004111,3.15e-07,122;UBERON:0000955,3.52e-07,47;UBERON:0006238,3.52e-07,47;UBERON:0010314,5.87e-07,92;UBERON:0000073,7.99e-07,54|phase1_expression=0.320297694209588,0.348975407639361,0,0,1.00179145989269,0,0.233612640595526,0.129123323441576,0.422366166455,0.468129052643987,0.171217968225505,0.0797721589953364,0.684802919724823,0.0874204024189974,0,0.202475267389826,0,0.946386496074713,0.411343300817216,0,1.19060606211498,1.29078236561151,1.04479915655574,0,0.22940928106717,0,0,0.215471232685889,0,0,0,1.27006134691926,0.61506478758457,0,0.288851619751275,0.332469290716985,0.204169356262369,0.418531630736908,2.3440060335714,0.523523743973798,2.35292595212406,1.36609096991689,1.45653105909346,0.125896817975577,0.405507724878058,0.917733760808408,0,3.92445281484804,1.31811709640683,1.74986909166855,1.81982348112971,1.43752564364972,0.335565212115473,0,0.336093799142464,1.80081605225163,3.15186783932632,4.12537673821954,0,0,0,0,0.889294796111139,0.449949858640699,0,0.7104801149461,0.898800331555214,2.30530983192933,0,0,0,0.285650984403804,0.441737081903227,0.122490799214954,0,0,5.50579404996943,3.19218345212969,3.99376986466233,0.131886287730194,0.0914876436024097,0.52091337055676,5.02529398202486,3.93933827022176,2.13917546887534,0,0.142371680799103,0.186399445825301,0.681535739998656,0.377857800533928,9.27566363845369,0.860423876981386,0.679971333707751,0,1.29955283489534,0.448026887097336,2.66844398250329,0,0.519572009205738,0,1.40843419776681,0,0,0,0,0,0,0.5709193985953,0,1.92974780784272,0,0,0.230615497256059,0.452167921657868,0.352766121407114,1.75933227861546,0,5.78397427679647,0,1.29413479957927,4.19598885074748,4.363877278217,3.72783522436244,3.51336956413857,4.60782754989601,0.510914110417183,2.03685711660064,1.79970819298022,1.14363204365758,3.44518470631092,1.83000241127451,0.502617408451458,0.347648640384553,1.53429274398198,4.36354893575076,2.43361894601636,0.712875546952214,1.99051152976149,0,1.05220927943237,0,0,0,0.150704817835715,0.136072998302656,0.512454881139399,0.187403449119458,5.95017752699736,0,0,0.175951124163949,0.219195732427575,0.834141747676794,0.348252166522167,0,0,2.1066395619397,1.54408744268829,0,0,0,0.180062061461015,0,0,0.154267112887378,0.232533944750408,0.268273401399619,1.86824547787471,2.63295759861569,2.79084688934462,5.59374785866405,5.4093995347373,4.83010253640311,4.56301823785264,1.89260953707715,0.308713837137853,0.330418782983798,0.528901133327089,0,0,0.257734922644187,0.201683524623343,0.22237804384487,0.190225626112559,0.474529061544512,0.494096864172033,0.502670417600539,0.198956472041151,1.36474860983384,0,0.864552199498777,2.19055400579804,0,0.114248512609729,0,0,0.193952487167626,0.280543279561274,1.13825766823663,2.06654207171443,1.72698600625512,1.85095745882701,0.592905254174298,0,0,0,0,0,0,0,0,0,1.43768206527355,0,0.312037673114561,0.252578877947112,0.358794827043824,0,5.72734889516475,0.189491411770485,0.162964976442026,0,0,0.167506257441816,0.238043640886014,0.780534591431195,0.472905432318573,1.7717175171902,2.07291199254733,3.76885623846197,2.24490476425664,1.01254341007058,3.01582567878545,0,0.983528546038072,0.827810238914197,4.17431533968259,2.93029216480508,1.3114795630134,5.30188947129183,0,0.390438744296638,0.646270193198397,0.477937595905104,0.222798674082394,0,0.404810701674894,1.46127928955656,0,2.89189184779626,2.12910127812403,0.178065603667255,0.325773918707152,1.97964147567043,0,0,0,0,0,0.307435147943927,0,1.09060118843252,0,2.21225730555071,1.05418608574999,0,2.7235168460303,0.18006109403131,0.776152102696527,1.71469628025274,10.6404140185364,7.13475270408282,7.56925494769756,7.30715877875038,0.469343416127421,0.21183207086382,0.441056796109924,0.8244312647074,0.645857706783622,0.965006798850494,1.3130957840345,0.492422699235184,0.582961673259701,2.96680483216816,0,0,0,0.376736914009382,0.27338845544205,0.457556346413045,2.54967644990783,3.21888340344413,2.07299960706636,4.77335309007557,0.158167996790568,0.203319467126849,0,0.627264888043406,0.655087691238533,0.809186078308924,0.578574190077352,1.04702376793612,2.59229946583586,1.24267862617385,0,0,0.330916980914195,0,0.129159823477731,0.337912250981556,0.58678619322877,0.651021924219751,0.943734099831398,0.483168241652012,0.288030006257865,0.316011120628178,0,0.102710957164827,0,0.179026695667481,0.198681354781265,0.120195449519969,0.147689527174577,0,0.15241361331,0.100826185136841,0.487289403698762,0.288635524920988,0.116876902181569,7.02864189207155,0.221985953374065,0,0.503653849092235,2.70465431645067,0,3.47988086107804,1.2862102744744,0,1.12950368523413,0.920650473014354,1.14579102687879,0.68741272937475,0,0,1.35004500046361,1.80128481289688,1.35942722695261,0.51776031175182,0.207574695168353,0,0,0.243106717068294,0,0.367687016900028,0.222246727801615,1.03017528619447,0.962757628775446,0.758091635291392,0.25347929989024,0.188626341386076,0.280924522409647,0.89635213366817,0.229741875822453,0.476293691283074,0.115884325944855,0.192909220463705,0.824171801606613,0.441596760403192,1.37147700954166,0.532427418478012,0.238436189947321,1.0174249164263,0.846984423737976,0.592302255241736,0.73171189149109,0.526139422875686,0.543216455383447,0.561142271657738,0.474540072496697,0.394017929502254,0,0.309873682371932,0.192906610981141,0.249810577937946,0.233931608445408,0.859484216193193,2.10417165275728,2.20591419119516,5.79669589051054|short_description=p4@Dbp}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:13170 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=10bp_to_ENSMUST00000155439_5end | |||
|cluster_id=chr7:52963269..52963305,+ | |||
|description=CAGE_peak_4_at_Dbp_5end | |||
|id=chr7:52963269..52963305,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004111,3.15e-07,122;UBERON:0000955,3.52e-07,47;UBERON:0006238,3.52e-07,47;UBERON:0010314,5.87e-07,92;UBERON:0000073,7.99e-07,54 | |||
|phase1_expression=0.320297694209588,0.348975407639361,0,0,1.00179145989269,0,0.233612640595526,0.129123323441576,0.422366166455,0.468129052643987,0.171217968225505,0.0797721589953364,0.684802919724823,0.0874204024189974,0,0.202475267389826,0,0.946386496074713,0.411343300817216,0,1.19060606211498,1.29078236561151,1.04479915655574,0,0.22940928106717,0,0,0.215471232685889,0,0,0,1.27006134691926,0.61506478758457,0,0.288851619751275,0.332469290716985,0.204169356262369,0.418531630736908,2.3440060335714,0.523523743973798,2.35292595212406,1.36609096991689,1.45653105909346,0.125896817975577,0.405507724878058,0.917733760808408,0,3.92445281484804,1.31811709640683,1.74986909166855,1.81982348112971,1.43752564364972,0.335565212115473,0,0.336093799142464,1.80081605225163,3.15186783932632,4.12537673821954,0,0,0,0,0.889294796111139,0.449949858640699,0,0.7104801149461,0.898800331555214,2.30530983192933,0,0,0,0.285650984403804,0.441737081903227,0.122490799214954,0,0,5.50579404996943,3.19218345212969,3.99376986466233,0.131886287730194,0.0914876436024097,0.52091337055676,5.02529398202486,3.93933827022176,2.13917546887534,0,0.142371680799103,0.186399445825301,0.681535739998656,0.377857800533928,9.27566363845369,0.860423876981386,0.679971333707751,0,1.29955283489534,0.448026887097336,2.66844398250329,0,0.519572009205738,0,1.40843419776681,0,0,0,0,0,0,0.5709193985953,0,1.92974780784272,0,0,0.230615497256059,0.452167921657868,0.352766121407114,1.75933227861546,0,5.78397427679647,0,1.29413479957927,4.19598885074748,4.363877278217,3.72783522436244,3.51336956413857,4.60782754989601,0.510914110417183,2.03685711660064,1.79970819298022,1.14363204365758,3.44518470631092,1.83000241127451,0.502617408451458,0.347648640384553,1.53429274398198,4.36354893575076,2.43361894601636,0.712875546952214,1.99051152976149,0,1.05220927943237,0,0,0,0.150704817835715,0.136072998302656,0.512454881139399,0.187403449119458,5.95017752699736,0,0,0.175951124163949,0.219195732427575,0.834141747676794,0.348252166522167,0,0,2.1066395619397,1.54408744268829,0,0,0,0.180062061461015,0,0,0.154267112887378,0.232533944750408,0.268273401399619,1.86824547787471,2.63295759861569,2.79084688934462,5.59374785866405,5.4093995347373,4.83010253640311,4.56301823785264,1.89260953707715,0.308713837137853,0.330418782983798,0.528901133327089,0,0,0.257734922644187,0.201683524623343,0.22237804384487,0.190225626112559,0.474529061544512,0.494096864172033,0.502670417600539,0.198956472041151,1.36474860983384,0,0.864552199498777,2.19055400579804,0,0.114248512609729,0,0,0.193952487167626,0.280543279561274,1.13825766823663,2.06654207171443,1.72698600625512,1.85095745882701,0.592905254174298,0,0,0,0,0,0,0,0,0,1.43768206527355,0,0.312037673114561,0.252578877947112,0.358794827043824,0,5.72734889516475,0.189491411770485,0.162964976442026,0,0,0.167506257441816,0.238043640886014,0.780534591431195,0.472905432318573,1.7717175171902,2.07291199254733,3.76885623846197,2.24490476425664,1.01254341007058,3.01582567878545,0,0.983528546038072,0.827810238914197,4.17431533968259,2.93029216480508,1.3114795630134,5.30188947129183,0,0.390438744296638,0.646270193198397,0.477937595905104,0.222798674082394,0,0.404810701674894,1.46127928955656,0,2.89189184779626,2.12910127812403,0.178065603667255,0.325773918707152,1.97964147567043,0,0,0,0,0,0.307435147943927,0,1.09060118843252,0,2.21225730555071,1.05418608574999,0,2.7235168460303,0.18006109403131,0.776152102696527,1.71469628025274,10.6404140185364,7.13475270408282,7.56925494769756,7.30715877875038,0.469343416127421,0.21183207086382,0.441056796109924,0.8244312647074,0.645857706783622,0.965006798850494,1.3130957840345,0.492422699235184,0.582961673259701,2.96680483216816,0,0,0,0.376736914009382,0.27338845544205,0.457556346413045,2.54967644990783,3.21888340344413,2.07299960706636,4.77335309007557,0.158167996790568,0.203319467126849,0,0.627264888043406,0.655087691238533,0.809186078308924,0.578574190077352,1.04702376793612,2.59229946583586,1.24267862617385,0,0,0.330916980914195,0,0.129159823477731,0.337912250981556,0.58678619322877,0.651021924219751,0.943734099831398,0.483168241652012,0.288030006257865,0.316011120628178,0,0.102710957164827,0,0.179026695667481,0.198681354781265,0.120195449519969,0.147689527174577,0,0.15241361331,0.100826185136841,0.487289403698762,0.288635524920988,0.116876902181569,7.02864189207155,0.221985953374065,0,0.503653849092235,2.70465431645067,0,3.47988086107804,1.2862102744744,0,1.12950368523413,0.920650473014354,1.14579102687879,0.68741272937475,0,0,1.35004500046361,1.80128481289688,1.35942722695261,0.51776031175182,0.207574695168353,0,0,0.243106717068294,0,0.367687016900028,0.222246727801615,1.03017528619447,0.962757628775446,0.758091635291392,0.25347929989024,0.188626341386076,0.280924522409647,0.89635213366817,0.229741875822453,0.476293691283074,0.115884325944855,0.192909220463705,0.824171801606613,0.441596760403192,1.37147700954166,0.532427418478012,0.238436189947321,1.0174249164263,0.846984423737976,0.592302255241736,0.73171189149109,0.526139422875686,0.543216455383447,0.561142271657738,0.474540072496697,0.394017929502254,0,0.309873682371932,0.192906610981141,0.249810577937946,0.233931608445408,0.859484216193193,2.10417165275728,2.20591419119516,5.79669589051054 | |||
|short_description=p4@Dbp | |||
}} |
Revision as of 09:06, 5 August 2015
Short description: | p4@Dbp |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Dbp_5end |
Coexpression cluster: | NA |
Association with transcript: | 10bp_to_ENSMUST00000155439_5end |
EntrezGene: | 13170 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
anatomical conduit | 3.15e-07 | 122 |
brain | 3.52e-07 | 47 |
future brain | 3.52e-07 | 47 |
structure with developmental contribution from neural crest | 5.87e-07 | 92 |
regional part of nervous system | 7.99e-07 | 54 |