FFCP PHASE1:Mm9::chr9:106724225..106724325,+: Difference between revisions
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{{FFCP|EntrezGene=321006|HGNC=|UniProt=Q80TR8|association_with_transcript=0bp_to_ENSMUST00000045973,NM_001015507,uc009rkp.2_5end|description=CAGE_peak_1_at_Vprbp_5end|id=chr9:106724225..106724325,+|ontology_enrichment_celltype=CL:0000542!2.06e-08!13;CL:0000051!2.06e-08!13;CL:0000838!4.27e-08!12;CL:0000084!1.37e-07!11;CL:0000827!1.37e-07!11;CL:0000791!6.22e-07!9;CL:0000789!6.22e-07!9;CL:0002420!6.22e-07!9;CL:0002419!6.22e-07!9;CL:0000790!6.22e-07!9|ontology_enrichment_celltype_v019_2=CL:0000542,2.06e-08,13;CL:0000051,2.06e-08,13;CL:0000838,4.27e-08,12;CL:0000084,1.37e-07,11;CL:0000827,1.37e-07,11;CL:0000791,6.22e-07,9;CL:0000789,6.22e-07,9;CL:0002420,6.22e-07,9;CL:0002419,6.22e-07,9;CL:0000790,6.22e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005057!1.77e-11!51;UBERON:0001048!6.43e-11!147;UBERON:0003929!1.16e-10!55;UBERON:0005911!2.97e-10!69;UBERON:0004177!1.64e-09!29;UBERON:0004921!2.01e-08!126;UBERON:0004185!2.01e-08!126;UBERON:0001007!6.74e-08!128;UBERON:0001555!6.74e-08!128;UBERON:0007026!6.74e-08!128;UBERON:0003408!8.57e-08!24;UBERON:0006562!1.94e-07!24;UBERON:0001557!1.94e-07!24;UBERON:0001042!1.94e-07!24;UBERON:0008814!1.94e-07!24;UBERON:0009145!1.94e-07!24;UBERON:0002370!2.08e-07!23;UBERON:0000974!2.08e-07!23;UBERON:0004807!2.08e-07!23;UBERON:0005058!2.08e-07!23;UBERON:0003351!2.08e-07!23;UBERON:0009113!2.08e-07!23;UBERON:0003295!2.08e-07!23;UBERON:0009722!2.08e-07!23;UBERON:0005562!2.08e-07!23;UBERON:0007690!2.08e-07!23;UBERON:0004119!2.38e-07!130;UBERON:0000925!2.38e-07!130;UBERON:0006595!2.38e-07!130;UBERON:0001041!3.20e-07!92;UBERON:0002405!6.14e-07!70|ontology_enrichment_uberon_v019_2=UBERON:0001048,3.10e-11,134;UBERON:0003929,1.16e-10,55;UBERON:0005911,2.97e-10,69;UBERON:0004177,1.64e-09,29;UBERON:0005057,1.64e-09,29;UBERON:0004921,3.13e-09,114;UBERON:0001007,1.21e-08,116;UBERON:0001555,1.21e-08,116;UBERON:0007026,1.21e-08,116;UBERON:0001041,2.97e-08,80;UBERON:0004119,4.89e-08,118;UBERON:0000925,4.89e-08,118;UBERON:0006595,4.89e-08,118;UBERON:0000077,5.58e-08,35;UBERON:0000153,5.93e-08,43;UBERON:0007811,8.10e-08,36;UBERON:0003408,8.57e-08,24;UBERON:0006562,1.94e-07,24;UBERON:0001557,1.94e-07,24;UBERON:0001042,1.94e-07,24;UBERON:0008814,1.94e-07,24;UBERON:0009145,1.94e-07,24;UBERON:0002370,2.08e-07,23;UBERON:0000974,2.08e-07,23;UBERON:0004807,2.08e-07,23;UBERON:0005058,2.08e-07,23;UBERON:0003351,2.08e-07,23;UBERON:0009113,2.08e-07,23;UBERON:0003295,2.08e-07,23;UBERON:0009722,2.08e-07,23;UBERON:0005562,2.08e-07,23;UBERON:0007690,2.08e-07,23|phase1_expression=21.9403920533568,22.6834014965585,19.1099680543605,21.4749590027849,11.0197060588196,25.6855286025191,24.2957146219347,27.6323912164973,47.8681655315667,40.2590985273829,34.4148116133265,40.7635732466169,33.3841423365851,29.7229368224591,28.3143297543313,35.0282212584399,34.2785320282792,25.236973228659,27.4228867211478,31.8292238848523,19.7300433150482,23.9291192394134,33.1723732206448,17.2791816616879,14.2233754261645,12.0588712464154,18.9535278309993,19.6078821744159,17.1021077510736,19.1542898617547,13.3038306393183,34.9266870402797,17.221814052368,0,32.9290846516453,23.2728503501889,31.0337421518801,5.4409111995798,3.1253413780952,8.37637990358077,5.29408339227913,9.56263678941824,13.1087795318411,14.8558245211181,12.4693625400003,11.9305388905093,7.04152209913235,3.70642765846759,4.17403747195497,5.24960727500565,7.27929392451885,2.87505128729943,29.6975212722193,31.1905721064878,34.9537551108163,6.17422646486273,6.87680255853016,12.3761302146586,16.7922662513466,13.2247744818008,13.3104594736298,6.77689064138264,3.55717918444456,2.2497492932035,1.97773272513395,1.4209602298922,2.39680088414724,1.92109152660777,24.6781277294177,23.0860154547191,23.135745748652,8.56952953211411,7.50953039235486,23.1507610516263,28.8494867764891,16.5459381589804,17.6185409599022,20.6853487698004,23.962619187974,19.7829431595291,16.4677758484337,16.6692278578163,15.9134309430787,18.5711661310454,20.7805616976462,19.1508580557884,15.5185132071022,16.7759501242771,16.6597625333005,16.2478854229589,32.4648227345879,11.185510400758,7.47968467078526,22.1278308571505,21.4426217757731,34.0500434193975,16.431997155415,8.18065548374677,8.05336614268893,6.71345191569646,19.4363919291819,15.3991772897181,25.4805239706646,14.2213340630666,7.57718643539249,10.8944742154292,10.1104889002957,18.2694207550496,34.9566142923682,17.813056687779,17.0015620230813,19.7902560902892,12.2226213545711,15.8258772580254,18.2262496060342,14.325991411583,17.5508427091405,23.2804964641058,16.8076004870476,21.6767578929528,23.6300424752621,20.8496358848145,31.6865994070808,26.0574909340277,27.2280718857492,25.034791410442,16.0552266837933,10.1983464268879,14.7401463404755,19.0234112044125,24.7050325522058,20.1046963380583,17.2086076990354,17.9000820131231,14.1295870300501,17.5220564113178,15.2759045775474,23.6373244159177,20.4705434331277,21.8859530121933,19.778307330331,19.0818746679783,17.4660265911189,25.1677045785644,25.445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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:321006 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q80TR8 | |||
|association_with_transcript=0bp_to_ENSMUST00000045973,NM_001015507,uc009rkp.2_5end | |||
|cluster_id=chr9:106724225..106724325,+ | |||
|description=CAGE_peak_1_at_Vprbp_5end | |||
|id=chr9:106724225..106724325,+ | |||
|ontology_enrichment_celltype=CL:0000542!2.06e-08!13;CL:0000051!2.06e-08!13;CL:0000838!4.27e-08!12;CL:0000084!1.37e-07!11;CL:0000827!1.37e-07!11;CL:0000791!6.22e-07!9;CL:0000789!6.22e-07!9;CL:0002420!6.22e-07!9;CL:0002419!6.22e-07!9;CL:0000790!6.22e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,2.06e-08,13;CL:0000051,2.06e-08,13;CL:0000838,4.27e-08,12;CL:0000084,1.37e-07,11;CL:0000827,1.37e-07,11;CL:0000791,6.22e-07,9;CL:0000789,6.22e-07,9;CL:0002420,6.22e-07,9;CL:0002419,6.22e-07,9;CL:0000790,6.22e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005057!1.77e-11!51;UBERON:0001048!6.43e-11!147;UBERON:0003929!1.16e-10!55;UBERON:0005911!2.97e-10!69;UBERON:0004177!1.64e-09!29;UBERON:0004921!2.01e-08!126;UBERON:0004185!2.01e-08!126;UBERON:0001007!6.74e-08!128;UBERON:0001555!6.74e-08!128;UBERON:0007026!6.74e-08!128;UBERON:0003408!8.57e-08!24;UBERON:0006562!1.94e-07!24;UBERON:0001557!1.94e-07!24;UBERON:0001042!1.94e-07!24;UBERON:0008814!1.94e-07!24;UBERON:0009145!1.94e-07!24;UBERON:0002370!2.08e-07!23;UBERON:0000974!2.08e-07!23;UBERON:0004807!2.08e-07!23;UBERON:0005058!2.08e-07!23;UBERON:0003351!2.08e-07!23;UBERON:0009113!2.08e-07!23;UBERON:0003295!2.08e-07!23;UBERON:0009722!2.08e-07!23;UBERON:0005562!2.08e-07!23;UBERON:0007690!2.08e-07!23;UBERON:0004119!2.38e-07!130;UBERON:0000925!2.38e-07!130;UBERON:0006595!2.38e-07!130;UBERON:0001041!3.20e-07!92;UBERON:0002405!6.14e-07!70 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001048,3.10e-11,134;UBERON:0003929,1.16e-10,55;UBERON:0005911,2.97e-10,69;UBERON:0004177,1.64e-09,29;UBERON:0005057,1.64e-09,29;UBERON:0004921,3.13e-09,114;UBERON:0001007,1.21e-08,116;UBERON:0001555,1.21e-08,116;UBERON:0007026,1.21e-08,116;UBERON:0001041,2.97e-08,80;UBERON:0004119,4.89e-08,118;UBERON:0000925,4.89e-08,118;UBERON:0006595,4.89e-08,118;UBERON:0000077,5.58e-08,35;UBERON:0000153,5.93e-08,43;UBERON:0007811,8.10e-08,36;UBERON:0003408,8.57e-08,24;UBERON:0006562,1.94e-07,24;UBERON:0001557,1.94e-07,24;UBERON:0001042,1.94e-07,24;UBERON:0008814,1.94e-07,24;UBERON:0009145,1.94e-07,24;UBERON:0002370,2.08e-07,23;UBERON:0000974,2.08e-07,23;UBERON:0004807,2.08e-07,23;UBERON:0005058,2.08e-07,23;UBERON:0003351,2.08e-07,23;UBERON:0009113,2.08e-07,23;UBERON:0003295,2.08e-07,23;UBERON:0009722,2.08e-07,23;UBERON:0005562,2.08e-07,23;UBERON:0007690,2.08e-07,23 | |||
|phase1_expression=21.9403920533568,22.6834014965585,19.1099680543605,21.4749590027849,11.0197060588196,25.6855286025191,24.2957146219347,27.6323912164973,47.8681655315667,40.2590985273829,34.4148116133265,40.7635732466169,33.3841423365851,29.7229368224591,28.3143297543313,35.0282212584399,34.2785320282792,25.236973228659,27.4228867211478,31.8292238848523,19.7300433150482,23.9291192394134,33.1723732206448,17.2791816616879,14.2233754261645,12.0588712464154,18.9535278309993,19.6078821744159,17.1021077510736,19.1542898617547,13.3038306393183,34.9266870402797,17.221814052368,0,32.9290846516453,23.2728503501889,31.0337421518801,5.4409111995798,3.1253413780952,8.37637990358077,5.29408339227913,9.56263678941824,13.1087795318411,14.8558245211181,12.4693625400003,11.9305388905093,7.04152209913235,3.70642765846759,4.17403747195497,5.24960727500565,7.27929392451885,2.87505128729943,29.6975212722193,31.1905721064878,34.9537551108163,6.17422646486273,6.87680255853016,12.3761302146586,16.7922662513466,13.2247744818008,13.3104594736298,6.77689064138264,3.55717918444456,2.2497492932035,1.97773272513395,1.4209602298922,2.39680088414724,1.92109152660777,24.6781277294177,23.0860154547191,23.135745748652,8.56952953211411,7.50953039235486,23.1507610516263,28.8494867764891,16.5459381589804,17.6185409599022,20.6853487698004,23.962619187974,19.7829431595291,16.4677758484337,16.6692278578163,15.9134309430787,18.5711661310454,20.7805616976462,19.1508580557884,15.5185132071022,16.7759501242771,16.6597625333005,16.2478854229589,32.4648227345879,11.185510400758,7.47968467078526,22.1278308571505,21.4426217757731,34.0500434193975,16.431997155415,8.18065548374677,8.05336614268893,6.71345191569646,19.4363919291819,15.3991772897181,25.4805239706646,14.2213340630666,7.57718643539249,10.8944742154292,10.1104889002957,18.2694207550496,34.9566142923682,17.813056687779,17.0015620230813,19.7902560902892,12.2226213545711,15.8258772580254,18.2262496060342,14.325991411583,17.5508427091405,23.2804964641058,16.8076004870476,21.6767578929528,23.6300424752621,20.8496358848145,31.6865994070808,26.0574909340277,27.2280718857492,25.034791410442,16.0552266837933,10.1983464268879,14.7401463404755,19.0234112044125,24.7050325522058,20.1046963380583,17.2086076990354,17.9000820131231,14.1295870300501,17.5220564113178,15.2759045775474,23.6373244159177,20.4705434331277,21.8859530121933,19.778307330331,19.0818746679783,17.4660265911189,25.1677045785644,25.4456506825966,28.953700784376,21.8325018224168,21.9897865128163,22.4190712650156,27.4203816243338,22.6976950171494,15.3437012699302,26.970583174883,21.5916343243743,18.7261744131229,24.8792833523116,12.6398373716382,12.8673953557358,9.66155897945015,19.2626968458017,19.7001890384121,22.3276956211658,24.6214525008619,23.2181793461937,20.8260602397961,21.8581908065383,23.0715125203672,14.8291984806305,18.4307031903098,21.8342727225197,21.7264409582893,21.6375981389492,21.0768110679409,22.1440590954613,21.2392848049769,20.992540925374,15.5296828002385,17.1892868331304,26.6610313169042,26.2427439202296,22.036335886078,24.6053900040478,20.0140239460383,14.4571475845545,24.2009821387701,14.658206970437,19.3528110776208,17.3092130675801,20.0813009732694,26.0657628509724,23.342909386467,21.3081162382173,20.6738012038859,25.705915337189,29.3040112750009,25.252764652819,21.7226785627741,18.936671370386,19.16067074865,23.4700135287567,19.1538447966477,18.3861774243483,22.2339470315362,31.0331896631935,26.9285823305088,28.5574882728764,28.6032771157789,27.9765505312804,27.2449661406119,16.686375972147,17.9970101720289,22.7885972946108,34.5043695665651,19.3513292787622,22.4667124642484,26.5207821844467,23.3216637578486,20.2626278972614,23.2789019609922,16.4857528240322,27.3781160422603,24.9525276089527,24.1730955737157,22.7808510120869,17.853273066451,15.4155581807661,20.650203877911,18.3815692408483,18.018388858296,25.8904037250866,24.3485824430913,18.2257813812705,7.53956419696361,2.17562273527484,25.5717421969899,28.1455481230827,18.7844190285717,18.8710815413447,11.4754461763673,18.6828486131236,15.4599027513966,12.1036010731958,15.5104846367615,17.4447222505363,15.5959071857676,16.4184387857523,15.7876173653209,12.2747460322751,16.2067988958075,26.66966926301,20.7232524404072,20.4775444217344,14.6598263418218,26.7251599215507,21.2392221343941,20.6363540731734,14.511530734308,16.2200368590072,13.5838870725155,12.604841065701,18.0899805217755,24.7202936044704,21.746340081468,21.8065362975713,23.1920938864997,21.6584640821192,25.1925308257803,18.1861704971623,15.9111181052788,16.9326257674958,19.6847659342924,17.4801441250029,19.4167844310503,12.178597964584,16.192347856396,14.8282449604674,28.4481633490901,28.855094264759,17.115229229766,20.9285849500701,22.3226283285865,26.91910755819,26.8162369699463,18.913380805072,23.238439788508,21.4642342681751,29.2607353244144,31.080795405774,37.3175241678399,28.8260498240219,17.1678214293794,20.1530091346068,20.0389962016414,19.0934123603023,20.5618395827738,21.1452245811923,20.6290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| |||
|short_description=p1@Vprbp | |||
}} |
Revision as of 12:21, 4 August 2015
Short description: | p1@Vprbp |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Vprbp_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000045973, NM_001015507, uc009rkp.2_5end |
EntrezGene: | 321006 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 2.06e-08 | 13 |
common lymphoid progenitor | 2.06e-08 | 13 |
lymphoid lineage restricted progenitor cell | 4.27e-08 | 12 |
T cell | 1.37e-07 | 11 |
pro-T cell | 1.37e-07 | 11 |
mature alpha-beta T cell | 6.22e-07 | 9 |
alpha-beta T cell | 6.22e-07 | 9 |
immature T cell | 6.22e-07 | 9 |
mature T cell | 6.22e-07 | 9 |
immature alpha-beta T cell | 6.22e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
primordium | 3.10e-11 | 134 |
gut epithelium | 1.16e-10 | 55 |
endo-epithelium | 2.97e-10 | 69 |
hemopoietic organ | 1.64e-09 | 29 |
immune organ | 1.64e-09 | 29 |
subdivision of digestive tract | 3.13e-09 | 114 |
digestive system | 1.21e-08 | 116 |
digestive tract | 1.21e-08 | 116 |
primitive gut | 1.21e-08 | 116 |
foregut | 2.97e-08 | 80 |
endoderm-derived structure | 4.89e-08 | 118 |
endoderm | 4.89e-08 | 118 |
presumptive endoderm | 4.89e-08 | 118 |
mixed endoderm/mesoderm-derived structure | 5.58e-08 | 35 |
anterior region of body | 5.93e-08 | 43 |
craniocervical region | 8.10e-08 | 36 |
gland of gut | 8.57e-08 | 24 |
pharynx | 1.94e-07 | 24 |
upper respiratory tract | 1.94e-07 | 24 |
chordate pharynx | 1.94e-07 | 24 |
pharyngeal arch system | 1.94e-07 | 24 |
pharyngeal region of foregut | 1.94e-07 | 24 |
thymus | 2.08e-07 | 23 |
neck | 2.08e-07 | 23 |
respiratory system epithelium | 2.08e-07 | 23 |
hemolymphoid system gland | 2.08e-07 | 23 |
pharyngeal epithelium | 2.08e-07 | 23 |
thymic region | 2.08e-07 | 23 |
pharyngeal gland | 2.08e-07 | 23 |
entire pharyngeal arch endoderm | 2.08e-07 | 23 |
thymus primordium | 2.08e-07 | 23 |
early pharyngeal endoderm | 2.08e-07 | 23 |