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FFCP PHASE1:Mm9::chr9:108957417..108957504,+: Difference between revisions

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{{FFCP|EntrezGene=66940|HGNC=|UniProt=E9Q0A6,Q9D7I0|association_with_transcript=0bp_to_ENSMUST00000151141,NM_026381,uc009rrq.1_5end|description=CAGE_peak_3_at_Shisa5_5end|id=chr9:108957417..108957504,+|ontology_enrichment_celltype=CL:0002321!7.75e-08!70;CL:0000220!7.75e-08!70;CL:0000144!7.19e-07!121;CL:0000012!7.19e-07!121|ontology_enrichment_celltype_v019_2=CL:0002321,7.74e-08,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!5.70e-12!51;UBERON:0000073!5.57e-09!75;UBERON:0001016!5.57e-09!75;UBERON:0004121!2.28e-08!102;UBERON:0000924!2.28e-08!102;UBERON:0006601!2.28e-08!102;UBERON:0001017!4.23e-08!73;UBERON:0005743!4.23e-08!73;UBERON:0002020!1.78e-07!34;UBERON:0001049!5.53e-07!52;UBERON:0005068!5.53e-07!52;UBERON:0006241!5.53e-07!52;UBERON:0007135!5.53e-07!52;UBERON:0002616!6.62e-07!49;UBERON:0000955!7.57e-07!50;UBERON:0006238!7.57e-07!50;UBERON:0000064!8.94e-07!99|ontology_enrichment_uberon_v019_2=UBERON:0007023,5.77e-12,51;UBERON:0011216,1.99e-10,194;UBERON:0001016,5.56e-09,75;UBERON:0001017,4.22e-08,73;UBERON:0000073,9.32e-08,54;UBERON:0000923,1.43e-07,291;UBERON:0010316,1.43e-07,291;UBERON:0005291,1.43e-07,291;UBERON:0006598,1.43e-07,291;UBERON:0010317,1.43e-07,291;UBERON:0002532,1.43e-07,291;UBERON:0002020,1.78e-07,34;UBERON:0000160,5.18e-07,31;UBERON:0001049,5.53e-07,52;UBERON:0005068,5.53e-07,52;UBERON:0006241,5.53e-07,52;UBERON:0007135,5.53e-07,52;UBERON:0004121,9.58e-07,95;UBERON:0000924,9.58e-07,95;UBERON:0006601,9.58e-07,95|phase1_expression=5.2849119544582,16.0528687514106,8.64498554840118,11.7961042409664,16.0286633582831,8.56184286750638,6.30754129607919,3.74457637980571,1.68946466582,1.87251621057595,1.02730780935303,1.19658238493005,2.73921167889929,1.13646523144697,5.3297561890506,6.2767332890846,4.19737126876888,4.73193248037357,3.97631857456642,5.51706547337439,11.2257142999412,7.14894848646374,5.74639536105658,13.2793710918528,12.3881011776272,10.3361753540704,16.3689558540448,12.0663890304098,28.3134894989997,17.1380488236753,13.7472916606289,3.17515336729816,4.30545351309199,0,7.51014211353314,9.97407872150954,7.35009682544529,6.27797446105362,6.2506827561904,12.0410461113974,1.17646297606203,2.73218193983378,5.34061388334269,4.78407908307194,3.95370031756107,3.67093504323363,134.571311227863,6.5407546914134,21.0898735425093,19.2485600083541,20.9979632438044,12.9377307928474,4.53013036355888,5.07753499407941,4.7053131879945,12.6057123657614,11.1748041576115,31.455997628924,6.47412674750713,8.99284664762456,3.80298842103708,19.6529828600097,59.5827513394463,50.3943841677583,70.2095117422552,58.2593694255802,31.4580116044325,29.9690278150813,5.91030790158323,6.34527910158946,7.78202357000113,15.7108041422092,10.6016899656774,4.5321595709533,4.50473713785711,2.75765635983006,18.7196997698961,15.8332299225633,15.0534402591119,5.53922408466814,6.58711033937349,4.68822033501084,16.4717969410815,17.4456409109821,16.5022107598955,8.83885756421003,10.5355043791336,7.26957838718672,31.4263702332714,29.8507662421803,4.34796733052517,15.487629785665,6.79971333707751,13.4925797909454,27.2906095328021,24.6414787903535,12.6399978118577,11.5892619353079,7.79358013808606,8.83348936275851,5.7745802108439,16.6824420638613,10.1922095882658,7.11066703153331,4.97929394325792,3.80039798212648,4.54972000513305,22.7225920640929,12.9468941823586,15.7348667408714,7.28638372417771,6.39377504455497,11.0695438682908,35.5705431704189,20.8132011630198,17.4676561948249,15.8204779349999,12.1463459812726,11.4999371753484,2.42650274921114,3.75430581382669,0.484875253135222,7.45567044872489,6.44117753425404,3.14170060220183,27.8448190177365,4.91242010474273,5.99902730993408,5.71816021828791,9.13722900369418,4.11750542536764,8.41884159156192,33.3742694769171,19.6900902144355,8.3115217823824,8.76102820565891,4.48093200941392,3.85661608891288,15.1633655060205,9.89076722666428,1.17108398666433,0.689706313300419,2.88099407688559,1.80845781402858,2.24520447199382,1.40925092313335,2.15513966487376,3.10444044886819,0.431135985865684,0.378212160335639,0.527853372491847,2.6303487891309,2.22437799380478,3.1342694986995,4.32142486456681,2.38841120182192,4.21327912387941,3.86021860672073,7.10408748488982,1.86413195281952,3.04883877975425,2.70093092191522,1.89395788468168,2.55793501271625,1.07986979021165,0.930135779001631,2.41446061259657,2.45207218971056,1.97471819896177,0.820837320395476,0.891756905004413,2.33919979880532,3.07370161407471,1.74468344388483,16.8231958851302,7.30622747892919,36.6764849112016,47.8655525661015,1.91959425481711,1.39342003116263,3.60828891701861,4.23535401709019,6.67134131534611,15.2180500890047,22.7773949541366,21.9049609782934,14.8287773192159,20.0946036761562,17.7417319278399,30.5598598942435,23.5590474363417,15.5330193138406,3.41402221715547,1.94222471436539,1.1270773567308,1.62921062276251,3.49114476901726,3.71719845418688,2.21327879934901,3.24742325555125,2.511979645462,2.09775178667061,21.3445891502747,3.17005700860579,4.52085688760367,3.14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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:66940
|HGNC=
|TSSclassifier=NA
|UniProt=uniprot:E9Q0A6,uniprot:Q9D7I0
|association_with_transcript=0bp_to_ENSMUST00000151141,NM_026381,uc009rrq.1_5end
|cluster_id=chr9:108957417..108957504,+
|description=CAGE_peak_3_at_Shisa5_5end
|id=chr9:108957417..108957504,+
|ontology_enrichment_celltype=CL:0002321!7.75e-08!70;CL:0000220!7.75e-08!70;CL:0000144!7.19e-07!121;CL:0000012!7.19e-07!121
|ontology_enrichment_celltype_v019_2=CL:0002321,7.74e-08,70
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
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|ontology_enrichment_uberon_v019_2=UBERON:0007023,5.77e-12,51;UBERON:0011216,1.99e-10,194;UBERON:0001016,5.56e-09,75;UBERON:0001017,4.22e-08,73;UBERON:0000073,9.32e-08,54;UBERON:0000923,1.43e-07,291;UBERON:0010316,1.43e-07,291;UBERON:0005291,1.43e-07,291;UBERON:0006598,1.43e-07,291;UBERON:0010317,1.43e-07,291;UBERON:0002532,1.43e-07,291;UBERON:0002020,1.78e-07,34;UBERON:0000160,5.18e-07,31;UBERON:0001049,5.53e-07,52;UBERON:0005068,5.53e-07,52;UBERON:0006241,5.53e-07,52;UBERON:0007135,5.53e-07,52;UBERON:0004121,9.58e-07,95;UBERON:0000924,9.58e-07,95;UBERON:0006601,9.58e-07,95
|phase1_expression=5.2849119544582,16.0528687514106,8.64498554840118,11.7961042409664,16.0286633582831,8.56184286750638,6.30754129607919,3.74457637980571,1.68946466582,1.87251621057595,1.02730780935303,1.19658238493005,2.73921167889929,1.13646523144697,5.3297561890506,6.2767332890846,4.19737126876888,4.73193248037357,3.97631857456642,5.51706547337439,11.2257142999412,7.14894848646374,5.74639536105658,13.2793710918528,12.3881011776272,10.3361753540704,16.3689558540448,12.0663890304098,28.3134894989997,17.1380488236753,13.7472916606289,3.17515336729816,4.30545351309199,0,7.51014211353314,9.97407872150954,7.35009682544529,6.27797446105362,6.2506827561904,12.0410461113974,1.17646297606203,2.73218193983378,5.34061388334269,4.78407908307194,3.95370031756107,3.67093504323363,134.571311227863,6.5407546914134,21.0898735425093,19.2485600083541,20.9979632438044,12.9377307928474,4.53013036355888,5.07753499407941,4.7053131879945,12.6057123657614,11.1748041576115,31.455997628924,6.47412674750713,8.99284664762456,3.80298842103708,19.6529828600097,59.5827513394463,50.3943841677583,70.2095117422552,58.2593694255802,31.4580116044325,29.9690278150813,5.91030790158323,6.34527910158946,7.78202357000113,15.7108041422092,10.6016899656774,4.5321595709533,4.50473713785711,2.75765635983006,18.7196997698961,15.8332299225633,15.0534402591119,5.53922408466814,6.58711033937349,4.68822033501084,16.4717969410815,17.4456409109821,16.5022107598955,8.83885756421003,10.5355043791336,7.26957838718672,31.4263702332714,29.8507662421803,4.34796733052517,15.487629785665,6.79971333707751,13.4925797909454,27.2906095328021,24.6414787903535,12.6399978118577,11.5892619353079,7.79358013808606,8.83348936275851,5.7745802108439,16.6824420638613,10.1922095882658,7.11066703153331,4.97929394325792,3.80039798212648,4.54972000513305,22.7225920640929,12.9468941823586,15.7348667408714,7.28638372417771,6.39377504455497,11.0695438682908,35.5705431704189,20.8132011630198,17.4676561948249,15.8204779349999,12.1463459812726,11.4999371753484,2.42650274921114,3.75430581382669,0.484875253135222,7.45567044872489,6.44117753425404,3.14170060220183,27.8448190177365,4.91242010474273,5.99902730993408,5.71816021828791,9.13722900369418,4.11750542536764,8.41884159156192,33.3742694769171,19.6900902144355,8.3115217823824,8.76102820565891,4.48093200941392,3.85661608891288,15.1633655060205,9.89076722666428,1.17108398666433,0.689706313300419,2.88099407688559,1.80845781402858,2.24520447199382,1.40925092313335,2.15513966487376,3.10444044886819,0.431135985865684,0.378212160335639,0.527853372491847,2.6303487891309,2.22437799380478,3.1342694986995,4.32142486456681,2.38841120182192,4.21327912387941,3.86021860672073,7.10408748488982,1.86413195281952,3.04883877975425,2.70093092191522,1.89395788468168,2.55793501271625,1.07986979021165,0.930135779001631,2.41446061259657,2.45207218971056,1.97471819896177,0.820837320395476,0.891756905004413,2.33919979880532,3.07370161407471,1.74468344388483,16.8231958851302,7.30622747892919,36.6764849112016,47.8655525661015,1.91959425481711,1.39342003116263,3.60828891701861,4.23535401709019,6.67134131534611,15.2180500890047,22.7773949541366,21.9049609782934,14.8287773192159,20.0946036761562,17.7417319278399,30.5598598942435,23.5590474363417,15.5330193138406,3.41402221715547,1.94222471436539,1.1270773567308,1.62921062276251,3.49114476901726,3.71719845418688,2.21327879934901,3.24742325555125,2.511979645462,2.09775178667061,21.3445891502747,3.17005700860579,4.52085688760367,3.14806957338795,3.44862206360455,3.85883455603867,3.31013607315846,9.20627639842594,8.10676133875177,9.88421087477093,11.5014565221884,16.3742016974142,10.2972432127805,14.1444171650383,19.5543180738884,8.68398338454061,7.57488079683079,1.51593129416388,2.28150967018836,1.86719594352707,1.64283173801951,1.50755631697634,4.52282917683426,8.00047956216975,1.26108115284953,2.87904096543407,3.34855014180723,3.11340297959902,5.00786447411097,1.73578870297814,42.2215595029962,34.2660580805787,13.769399644533,13.2449638226272,9.79358598925531,8.20481806145422,2.45902418065013,0.504941854408746,4.41711507182759,5.0757036758563,3.66219776145758,5.73525115086125,4.67877215573028,5.09537755419898,3.64329631507405,4.67609372658099,4.34816555741176,5.46246237917072,7.66476460124651,4.27357448801413,3.74640006513225,10.8880281161873,2.65490276679926,3.8844901784797,3.93020624054176,3.20628635585027,5.61073596473468,3.99665692327106,11.62927319257,3.27180356529755,2.49548164869305,1.26414703174326,2.10837217149998,0,9.53230896110606,2.34079422240703,3.88076051348264,3.42939256050548,4.61084607469911,3.56737635204141,6.08831376227848,7.91608867697958,26.752574719263,20.9713750155182,7.71849393192367,11.2122652000206,5.48979050766079,5.97097956788743,4.05865969610664,3.28281799490123,25.0673519501672,9.45669040253599,9.91051108627546,3.92135049130123,10.1856990053341,4.1441060541032,6.01454601972511,5.71945433016307,8.49892149969276,8.25713568709582,6.49539876880792,26.7307773044232,2.21435195506795,1.82987520414164,1.62008011232702,4.59994251231831,6.55087691238533,5.52943820177765,5.86839535649885,9.6849698534091,10.8876577565106,10.5627683224777,0.56369293868419,2.0932316446157,2.64733584731356,2.52786544847262,2.84151611651008,4.56181538825101,3.52071715937262,1.69265700297135,1.36317147753424,0.966336483304024,0.576060012515731,4.74016680942267,3.04087822935246,3.18403967210964,8.05509102462329,5.72885426135941,5.36439657909415,4.92801343031872,3.69223817936443,3.53382574818517,2.51482461961499,3.7305688500631,3.60594158737084,2.69393156592922,3.15567635890236,8.61575457737803,2.44184548711471,0.358855426437903,1.67884616364078,13.7164611762855,23.6479919068489,17.7657075539247,7.5028932677673,14.5455910170255,22.5900737046827,21.6352861158373,17.1868654031819,22.1690605223357,26.718218271055,19.6402413321322,21.6007200074178,26.568950990229,24.469690085147,20.7104124700728,0.518936737920883,1.19707462020309,1.36586884603307,2.67417388775123,1.67690530102386,2.5738091183002,3.11145418922261,2.67845574410562,1.92551525755089,2.02157769411038,3.04175159868288,2.26351609663291,3.183811253976,3.07320731543373,4.99688579913835,4.76293691283074,3.70829843023538,3.6652751888104,2.06042950401653,5.00476328456951,2.40008476669791,3.19456451086807,2.38436189947321,2.32554266611726,3.67026583619789,3.46919892355874,2.56099162021882,3.6829759601298,2.8518863907631,1.12228454331548,3.55905054372522,2.56111654176465,1.22769312950907,4.64810523557898,4.82266527452853,6.49507502638659,6.08222181958062,8.37997110788363,3.44318997723918,2.8676884485537,1.62307484934295
|short_description=p3@Shisa5
}}

Revision as of 14:18, 4 August 2015

Short description:p3@Shisa5
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Shisa5_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000151141, NM_026381, uc009rrq.1_5end
EntrezGene:66940
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Shisa5

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G75.28
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I516.05
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I68.64
CD326+ enterocyte, pool1.CNhs13542.11848-124I311.80
CD326+ enterocyte, pool2.CNhs13197.11849-124I416.03
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I78.56
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I86.31
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E93.74
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E71.69
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.87
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E61.03
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F11.20
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E42.74
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E81.14
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A15.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A36.28
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A54.20
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A24.73
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A43.98
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A65.52
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A311.23
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H27.15
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I95.75
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D113.28
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D212.39
GP2+ M cell, pool1.CNhs13228.11845-124H910.34
GP2+ M cell, pool2.CNhs13231.11846-124I116.37
GP2+ M cell, pool3.CNhs13240.11847-124I212.07
Ileum epithelium, pool1.CNhs13199.10252-104B928.31
Ileum epithelium, pool2.CNhs13232.10253-104C117.14
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C813.75
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I33.18
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G64.31
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F57.51
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F69.97
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F77.35
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G86.28
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H16.25
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H312.04
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H22.73
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H45.34
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D84.78
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D93.95
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B33.67
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B7134.57
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C26.54
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B821.09
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C319.25
Mouse Astrocytes, donor2.CNhs12078.11552-120C421.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C412.94
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A24.53
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I95.08
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A14.71
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C112.61
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E111.17
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C531.46
Mouse Granule cells, donor1.CNhs12131.11713-123C36.47
Mouse Granule cells, donor2.CNhs12357.11731-123E38.99
Mouse Granule cells, donor3.CNhs12108.11636-122C73.80
Mouse Meningeal cells, donor1.CNhs12132.11716-123C619.65
Mouse Meningeal cells, donor3.CNhs12109.11639-122D159.58
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C750.39
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E770.21
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D258.26
Mouse Microglia, donor1.CNhs12629.11718-123C831.46
Mouse Microglia, donor2.CNhs12634.11736-123E829.97
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D55.91
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F56.35
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D97.78
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F115.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D510.60
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D24.53
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F24.50
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D62.76
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D318.72
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F315.83
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D715.05
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D45.54
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F46.59
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D84.69
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E416.47
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E517.45
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I616.50
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D68.84
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F610.54
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E17.27
Mouse Schwann, donor1.CNhs12507.11728-123D931.43
Mouse Schwann, donor2.CNhs12573.11746-123F929.85
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G34.35
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F715.49
Mouse hepatocyte, donor1.CNhs13078.11714-123C46.80
Mouse hepatocyte, donor3.CNhs12615.11637-122C813.49
Mouse hepatocyte, donor6.CNhs13090.11822-124F427.29
Mouse hepatocyte, donor8.CNhs13091.11824-124F624.64
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A712.64
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I711.59
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E37.79
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I88.83
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G65.77
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H116.68
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I810.19
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G14.98
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G23.80
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G34.55
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B622.72
accessory axillary lymph node, adult.CNhs10475.1063-29H912.95
adrenal gland, adult.CNhs10508.49-24D715.73
adrenal gland, embryo E14.CNhs11038.406-44C57.29
adrenal gland, embryo E16.CNhs11004.1254-43D66.39
adrenal gland, embryo E17.CNhs11043.1263-45I111.07
adrenal gland, embryo E18.CNhs11026.1262-18F535.57
adrenal gland, neonate N00.CNhs11191.1311-23C120.81
adrenal gland, neonate N25.CNhs11223.1377-27I317.47
amnion, adult pregnant day17.5.CNhs10488.583-22A815.82
aorta, adult.CNhs10498.46-23H112.15
bone (os femoris), adult.CNhs10483.56-12G211.50
bone (os femoris), neonate N02.CNhs11227.1985-43F52.43
bone (os femoris), neonate N16.CNhs11225.1525-43A63.75
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H47.46
cerebellum, adult.CNhs10494.15-8B26.44
cerebellum, neonate N30.CNhs11135.1395-42I23.14
colon, adult.CNhs10468.36-18H727.84
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C74.91
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D16.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D45.72
corpora quadrigemina, adult.CNhs10501.16-22A49.14
corpus striatum, adult.CNhs10487.19-21D84.12
corpus striatum, neonate N00.CNhs11226.630-43F18.42
cortex, adult.CNhs10473.12-14D533.37
cortex, neonate N30.CNhs11107.1392-42F219.69
diencephalon, adult.CNhs10482.20-12F28.31
diencephalon, neonate N30.CNhs11201.1388-42B28.76
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B14.48
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A23.86
epididymis, adult.CNhs10490.58-23B215.16
eyeball, adult.CNhs10484.31-12G49.89
eyeball, embryo E12.CNhs11016.345-16C61.17
eyeball, embryo E14.CNhs10521.399-16E20.69
eyeball, embryo E15.CNhs10593.426-16C92.88
eyeball, embryo E17.CNhs11023.1261-18D41.81
eyeball, neonate N00.CNhs11207.633-15C62.25
eyeball, neonate N01.CNhs11140.1532-43E71.41
eyeball, neonate N02.CNhs11205.1551-44G82.16
eyeball, neonate N16.CNhs11188.777-19A23.10
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.53
forelimb, embryo E14.CNhs10577.413-26A82.63
forelimb, embryo E15.CNhs11007.437-20E72.22
forelimb, embryo E17.CNhs10598.1517-43C43.13
forelimb, embryo E18.CNhs11008.1520-43B54.32
gonad, embryo E13.CNhs11044.1564-45I62.39
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C84.21
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D23.86
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D57.10
heart, embryo E11.CNhs10586.331-24E91.86
heart, embryo E12.CNhs11015.353-12F53.05
heart, embryo E13.CNhs11013.376-3I92.70
heart, embryo E14.CNhs10597.403-26D41.89
heart, embryo E15.CNhs11017.431-16C82.56
heart, embryo E16.CNhs11021.457-17C61.08
heart, embryo E17.CNhs11025.479-18E50.93
heart, embryo E18.CNhs11030.1283-20G32.41
heart, neonate N00.CNhs11213.639-21E32.45
heart, neonate N03.CNhs11221.1349-25I21.97
heart, neonate N10.CNhs11118.749-24G10.82
heart, neonate N16.CNhs11209.782-15G10.89
heart, neonate N20.CNhs11127.821-26I62.34
heart, neonate N25.CNhs11196.1351-25D33.07
heart, neonate N30.CNhs11202.1390-42D21.74
hippocampus, adult.CNhs10478.13-16E816.82
hippocampus, neonate N00.CNhs11228.627-43G17.31
intestinal mucosa, adult.CNhs10506.860-29I336.68
intestine, adult.CNhs10496.178-9A347.87
intestine, embryo E12.CNhs11019.1251-16I51.92
intestine, embryo E13.CNhs11010.381-16D51.39
intestine, embryo E15.CNhs10602.976-16D83.61
intestine, embryo E16.CNhs10585.463-22H44.24
intestine, embryo E17.CNhs10582.482-18D36.67
intestine, embryo E18.CNhs10526.1289-20F715.22
intestine, neonate N00.CNhs11126.644-26D122.78
intestine, neonate N01.CNhs11192.1322-23E921.90
intestine, neonate N06.CNhs11102.688-20B814.83
intestine, neonate N07.CNhs11095.720-20F220.09
intestine, neonate N10.CNhs11098.755-23A517.74
intestine, neonate N20.CNhs11187.827-18D130.56
intestine, neonate N25.CNhs11121.1352-25E323.56
intestine, neonate N30.CNhs11131.1384-42G115.53
kidney, embryo E14.CNhs10606.411-4I93.41
kidney, embryo E15.CNhs10997.434-16F81.94
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I21.63
kidney, embryo E18.CNhs11001.1288-20C73.49
kidney, neonate N00.CNhs11214.646-21G73.72
kidney, neonate N10.CNhs11206.758-6D52.21
kidney, neonate N20.CNhs11113.832-19I13.25
kidney, neonate N25.CNhs11122.1353-25F32.51
kidney, neonate N30.CNhs11203.1385-42H12.10
liver, adult pregnant day01.CNhs10466.508-5B221.34
liver, embryo E12.CNhs10601.355-15F83.17
liver, embryo E13.CNhs10524.378-3H64.52
liver, embryo E14.CNhs10594.409-16E13.15
liver, embryo E15.CNhs10520.433-16D73.45
liver, embryo E16.CNhs10523.462-17F53.86
liver, embryo E17.CNhs10510.481-18A33.31
liver, embryo E18.CNhs10579.499-43G49.21
liver, neonate N00.CNhs11117.641-24F48.11
liver, neonate N03.CNhs11123.1345-25G29.88
liver, neonate N06.CNhs11101.684-20A811.50
liver, neonate N07.CNhs11103.716-20H216.37
liver, neonate N10.CNhs11115.751-24B910.30
liver, neonate N20.CNhs11220.823-25A314.14
liver, neonate N25.CNhs11198.1368-26H119.55
liver, neonate N30.CNhs11106.1382-42D18.68
lung, adult.CNhs10474.28-22B17.57
lung, embryo E12.CNhs10522.354-16G21.52
lung, embryo E14.CNhs10604.404-26F82.28
lung, embryo E15.CNhs11020.432-17C51.87
lung, embryo E16.CNhs10998.458-17B61.64
lung, embryo E17.CNhs10605.480-44A61.51
lung, embryo E18.CNhs10583.1287-20I64.52
lung, neonate N00.CNhs11224.640-42C68.00
lung, neonate N06.CNhs11212.683-20E51.26
lung, neonate N07.CNhs11111.715-19A32.88
lung, neonate N10.CNhs11219.750-23E63.35
lung, neonate N20.CNhs11109.822-18A43.11
lung, neonate N25.CNhs11119.1359-25C75.01
lung, neonate N30.CNhs11133.1394-42H21.74
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A142.22
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A134.27
mammary gland, adult lactating day02.CNhs10480.595-22B613.77
mammary gland, adult pregnant day19.CNhs10476.588-5H213.24
medulla oblongata, adult.CNhs10477.17-12C29.79
medulla oblongata, neonate N30.CNhs11200.1396-42A38.20
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C72.46
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E14.42
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E25.08
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E33.66
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D75.74
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D84.68
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D95.10
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D43.64
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D54.68
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D64.35
olfactory brain, adult.CNhs10489.18-22I95.46
ovary, adult.CNhs10507.91-2I77.66
ovary, embryo E18.CNhs11040.505-44H74.27
ovary, neonate N00.CNhs11217.1299-22I43.75
oviduct, adult pregnant day01.CNhs10500.988-6G610.89
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F43.88
pancreas, embryo E15.CNhs11042.1556-45F23.93
pancreas, embryo E16.CNhs11003.460-26E53.21
pancreas, embryo E17.CNhs10599.1558-45G35.61
pancreas, embryo E18.CNhs10580.1535-43I74.00
pancreas, neonate N00.CNhs11105.645-26G911.63
pancreas, neonate N01.CNhs11138.1531-43D73.27
pancreas, neonate N02.CNhs11139.1539-43D82.50
pancreas, neonate N16.CNhs11136.787-43B61.26
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G89.53
pituitary gland, embryo E12.CNhs11018.346-16E62.34
pituitary gland, embryo E13.CNhs11009.370-44C73.88
pituitary gland, embryo E14.CNhs11037.398-44A53.43
pituitary gland, embryo E15.CNhs10592.427-16B94.61
pituitary gland, embryo E16.CNhs11036.449-43F63.57
pituitary gland, embryo E17.CNhs11039.1265-44F56.09
pituitary gland, neonate N00.CNhs11190.1308-22E97.92
placenta, adult pregnant day10.CNhs10472.539-13I726.75
placenta, adult pregnant day17.CNhs10464.577-18G320.97
prostate, adult.CNhs10470.859-1F87.72
skin, adult.CNhs10492.30-1C311.21
skin, neonate N00.CNhs11124.650-25G45.49
skin, neonate N03.CNhs11215.662-22H35.97
skin, neonate N06.CNhs11097.693-20I54.06
skin, neonate N10.CNhs11108.762-6C43.28
small intestine, neonate N16.CNhs11114.790-21I125.07
spinal cord, adult.CNhs10505.24-13C99.46
spleen, adult.CNhs10465.25-2G29.91
spleen, embryo E16.CNhs11035.461-43C13.92
spleen, embryo E18.CNhs11011.1271-21F210.19
spleen, neonate N10.CNhs11116.752-24D14.14
spleen, neonate N20.CNhs11112.824-19H16.01
spleen, neonate N25.CNhs11099.1354-25G35.72
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C68.50
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C98.26
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D36.50
stomach, adult.CNhs10503.33-1H626.73
stomach, embryo E12.CNhs10588.356-43E32.21
stomach, embryo E15.CNhs10603.1252-16G81.83
stomach, embryo E16.CNhs11022.459-17D41.62
stomach, embryo E17.CNhs11006.1035-18D54.60
stomach, embryo E18.CNhs10999.1286-20C66.55
stomach, neonate N03.CNhs11193.1340-24B85.53
stomach, neonate N07.CNhs11210.718-18A95.87
stomach, neonate N25.CNhs11104.1355-25E49.68
stomach, neonate N30.CNhs11134.1386-42I110.89
submandibular gland, adult.CNhs10469.59-29C110.56
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F52.09
testis, embryo E15.CNhs11034.443-27C52.65
testis, embryo E16.CNhs11033.470-26G52.53
testis, embryo E17.CNhs11029.486-18I52.84
testis, embryo E18.CNhs11027.503-18G54.56
testis, neonate N00.CNhs11189.1300-22B73.52
testis, neonate N07.CNhs11222.726-26I41.69
testis, neonate N10.CNhs11204.763-44D91.36
testis, neonate N20.CNhs11110.839-18H30.97
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B54.74
thymus, embryo E14.CNhs11041.402-44I43.04
thymus, embryo E15.CNhs11005.430-45I23.18
thymus, embryo E16.CNhs11002.456-26C58.06
thymus, embryo E17.CNhs10581.478-18C15.73
thymus, embryo E18.CNhs10595.1273-19G45.36
thymus, neonate N02.CNhs11181.1541-43F84.93
thymus, neonate N03.CNhs11137.2104-43C73.69
thymus, neonate N06.CNhs11197.681-26C43.53
thymus, neonate N07.CNhs11211.713-19D32.51
thymus, neonate N10.CNhs11194.748-24E43.73
thymus, neonate N20.CNhs11186.820-7A23.61
thymus, neonate N25.CNhs11125.1362-25G72.69
thymus, neonate N30.CNhs11132.1393-42G23.16
tongue, adult.CNhs10499.32-1B48.62
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H32.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.36
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.68
urinary bladder, adult.CNhs10481.879-12E413.72
uterus, adult pregnant day19.CNhs10497.590-15F523.65
uterus, adult.CNhs10509.92-27E517.77
vagina, adult.CNhs10502.89-27D57.50
vesicular gland, adult.CNhs10491.51-27F814.55
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A122.59
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A221.64
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A317.19
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D722.17
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A426.72
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A519.64
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A621.60
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A726.57
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A824.47
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A920.71
whole body, embryo E11.CNhs11014.324-5I80.52
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H21.37
whole body, embryo E14.5.CNhs10578.420-27D22.67
whole body, embryo E14.CNhs10519.395-14B11.68
whole body, embryo E16.CNhs10514.453-14F22.57
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G53.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.68
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.02
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G53.04
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.26
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.18
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G53.07
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G55.00
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G54.76
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G53.71
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G53.67
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G55.00
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.40
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.19
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.33
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G53.67
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G53.47
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.56
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G53.68
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.85
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G53.56
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.56
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G54.65
whole body, embryo E17.5.CNhs10513.490-9F94.82
whole body, embryo E17.CNhs10517.475-3I56.50
whole body, embryo E18.CNhs10516.493-3B36.08
whole body, neonate N00.CNhs10525.657-19C28.38
whole body, neonate N01.CNhs10576.659-23C63.44
whole body, neonate N06.CNhs10515.692-21D12.87
whole body, neonate N10.CNhs10518.761-6B41.62





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
embryonic cell7.74e-0870

Uber anatomy
Ontology termp-valuen
adult organism5.77e-1251
organ system subdivision1.99e-10194
nervous system5.56e-0975
central nervous system4.22e-0873
regional part of nervous system9.32e-0854
germ layer1.43e-07291
germ layer / neural crest1.43e-07291
embryonic tissue1.43e-07291
presumptive structure1.43e-07291
germ layer / neural crest derived structure1.43e-07291
epiblast (generic)1.43e-07291
gray matter1.78e-0734
intestine5.18e-0731
neural tube5.53e-0752
neural rod5.53e-0752
future spinal cord5.53e-0752
neural keel5.53e-0752
ectoderm-derived structure9.58e-0795
ectoderm9.58e-0795
presumptive ectoderm9.58e-0795
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