FFCP PHASE1:Mm9::chr9:20842219..20842239,-: Difference between revisions
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{{FFCP|EntrezGene=|HGNC=|MCL_coexpression_id=159|UniProt=|association_with_transcript=0bp_to_ENSMUST00000164156_5end|description=CAGE_peak_1_at_ENSMUST00000164156_5end|id=chr9:20842219..20842239,-|ontology_enrichment_celltype=CL:0000117!2.27e-17!23;CL:0000337!2.27e-17!23;CL:0000540!1.51e-16!33;CL:0000047!1.51e-16!33;CL:0000031!1.51e-16!33;CL:0000404!1.51e-16!33;CL:0000221!1.05e-12!44;CL:0000133!1.05e-12!44;CL:0002319!1.29e-12!43;CL:0000393!2.18e-12!39;CL:0000211!2.18e-12!39;CL:0000055!2.72e-09!50|ontology_enrichment_celltype_v019_2=CL:0000117,1.96e-30,23;CL:0000337,1.96e-30,23;CL:0000540,9.18e-24,33;CL:0000047,9.18e-24,33;CL:0000031,9.18e-24,33;CL:0000404,9.18e-24,33;CL:0000393,8.37e-19,39;CL:0000211,8.37e-19,39;CL:0002319,2.77e-16,43;CL:0000221,9.97e-16,44;CL:0000133,9.97e-16,44;CL:0002609,1.95e-07,6;CL:0002321,4.50e-07,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!2.33e-29!73;UBERON:0005743!2.33e-29!73;UBERON:0000073!2.21e-28!75;UBERON:0001016!2.21e-28!75;UBERON:0001049!4.04e-24!52;UBERON:0005068!4.04e-24!52;UBERON:0006241!4.04e-24!52;UBERON:0007135!4.04e-24!52;UBERON:0000033!2.52e-23!63;UBERON:0000955!2.59e-22!50;UBERON:0006238!2.59e-22!50;UBERON:0002346!4.77e-22!71;UBERON:0003075!4.77e-22!71;UBERON:0007284!4.77e-22!71;UBERON:0002616!1.27e-21!49;UBERON:0004121!3.71e-21!102;UBERON:0000924!3.71e-21!102;UBERON:0006601!3.71e-21!102;UBERON:0003056!6.68e-19!49;UBERON:0002020!1.16e-18!34;UBERON:0003080!5.99e-18!40;UBERON:0002780!3.88e-17!39;UBERON:0001890!3.88e-17!39;UBERON:0006240!3.88e-17!39;UBERON:0002791!8.92e-15!29;UBERON:0003528!8.92e-15!29;UBERON:0001893!8.92e-15!29;UBERON:0007811!4.17e-13!86;UBERON:0000153!1.32e-12!94;UBERON:0000956!2.48e-09!21;UBERON:0001869!2.48e-09!21;UBERON:0000203!2.48e-09!21;UBERON:0002619!3.34e-07!17;UBERON:0002420!5.53e-07!8;UBERON:0007245!5.53e-07!8;UBERON:0010009!5.53e-07!8;UBERON:0010011!5.53e-07!8;UBERON:0000454!5.53e-07!8;UBERON:0003076!8.83e-07!12;UBERON:0003057!8.83e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0002020,1.70e-32,34;UBERON:0001017,3.92e-32,73;UBERON:0000073,3.24e-31,54;UBERON:0001016,6.76e-31,75;UBERON:0001049,1.20e-28,52;UBERON:0005068,1.20e-28,52;UBERON:0006241,1.20e-28,52;UBERON:0007135,1.20e-28,52;UBERON:0003528,2.17e-25,29;UBERON:0002791,2.17e-25,29;UBERON:0001893,2.17e-25,29;UBERON:0002346,6.70e-25,64;UBERON:0003075,6.70e-25,64;UBERON:0007284,6.70e-25,64;UBERON:0004121,1.31e-23,95;UBERON:0000924,1.31e-23,95;UBERON:0006601,1.31e-23,95;UBERON:0000955,3.29e-22,47;UBERON:0006238,3.29e-22,47;UBERON:0003080,9.97e-22,40;UBERON:0010371,1.83e-21,73;UBERON:0002616,3.86e-21,46;UBERON:0002780,2.06e-20,39;UBERON:0001890,2.06e-20,39;UBERON:0006240,2.06e-20,39;UBERON:0003056,1.52e-18,49;UBERON:0000956,1.79e-15,21;UBERON:0001869,1.79e-15,21;UBERON:0000203,1.79e-15,21;UBERON:0010314,1.54e-14,92;UBERON:0002619,1.30e-11,17;UBERON:0002420,1.84e-11,8;UBERON:0007245,1.84e-11,8;UBERON:0010009,1.84e-11,8;UBERON:0010011,1.84e-11,8;UBERON:0000454,1.84e-11,8;UBERON:0002240,1.30e-09,6;UBERON:0005174,1.30e-09,6;UBERON:0001137,1.30e-09,6;UBERON:0002021,8.35e-09,10;UBERON:0000411,8.35e-09,10;UBERON:0001950,8.35e-09,10;UBERON:0001948,2.05e-08,5;UBERON:0002315,2.05e-08,5;UBERON:0000369,2.13e-07,5;UBERON:0002435,2.13e-07,5;UBERON:0000204,2.13e-07,5;UBERON:0010082,2.13e-07,5;UBERON:0003076,2.41e-07,12;UBERON:0003057,2.41e-07,12;UBERON:0000025,3.45e-07,114;UBERON:0002950,4.08e-07,4;UBERON:0001891,4.08e-07,4;UBERON:0009616,4.08e-07,4;UBERON:0010286,4.08e-07,4|phase1_expression=1.12104192973356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0,0,0.139986421625363,0,0,0,0,0.257259436035947,0,0,5.66486090406874,13.2247744818008,8.87363964908651,0,0,0.449949858640699,0,0,0.299600110518405,0.384218305321555,1.55534418462716,2.97013064329719,2.3135745748652,8.85518051651791,11.0434270475807,1.95985278743926,2.20444583341944,6.43453150627015,5.50579404996943,6.51205424234457,10.5988507946808,7.91317726381163,8.78281378583133,5.73004707612436,8.37548997004143,10.6924895906019,8.70950012327818,9.42811473515737,8.96941589034349,7.08317894136142,0,0.151143120213571,0,0,0,0,0,0,0,0,0,0,0.281686839553361,0,0,0,0,0,0,0.11418387971906,0,0,0.173485326766136,0,0,0,0.117588707135705,0,0,0,0,0,0.220841518460394,0.484875253135222,0,0.878342391034642,0.83778682725382,0,0,0,0,15.4284358586967,2.28750301409313,4.64921102817598,2.78118912307642,1.79000820131231,8.10373373782284,5.67844420737152,0.611036183101898,0,0,1.05220927943237,0,0.229902104433473,0.180062129805349,0.452114453507145,0.95251098811859,0.768682321709099,0.655912071918102,1.29351685369508,0,0.567318240503458,0.175951124163949,0.657587197282725,0.278047249225598,0,0.205782136407943,0.199034266818493,0,0,0,0,0.234526059981096,0.180062061461015,0,0,0,0,0.268273401399619,0,0,0,0,0.146199987425332,0.219550115291051,0.134206418760372,1.05144974282064,7.40913209130848,0,0.264450566663544,0.213288250535234,0.2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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene= | |||
|HGNC= | |||
|MCL_coexpression_id=159 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENSMUST00000164156_5end | |||
|cluster_id=chr9:20842219..20842239,- | |||
|description=CAGE_peak_1_at_ENSMUST00000164156_5end | |||
|id=chr9:20842219..20842239,- | |||
|ontology_enrichment_celltype=CL:0000117!2.27e-17!23;CL:0000337!2.27e-17!23;CL:0000540!1.51e-16!33;CL:0000047!1.51e-16!33;CL:0000031!1.51e-16!33;CL:0000404!1.51e-16!33;CL:0000221!1.05e-12!44;CL:0000133!1.05e-12!44;CL:0002319!1.29e-12!43;CL:0000393!2.18e-12!39;CL:0000211!2.18e-12!39;CL:0000055!2.72e-09!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.96e-30,23;CL:0000337,1.96e-30,23;CL:0000540,9.18e-24,33;CL:0000047,9.18e-24,33;CL:0000031,9.18e-24,33;CL:0000404,9.18e-24,33;CL:0000393,8.37e-19,39;CL:0000211,8.37e-19,39;CL:0002319,2.77e-16,43;CL:0000221,9.97e-16,44;CL:0000133,9.97e-16,44;CL:0002609,1.95e-07,6;CL:0002321,4.50e-07,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.33e-29!73;UBERON:0005743!2.33e-29!73;UBERON:0000073!2.21e-28!75;UBERON:0001016!2.21e-28!75;UBERON:0001049!4.04e-24!52;UBERON:0005068!4.04e-24!52;UBERON:0006241!4.04e-24!52;UBERON:0007135!4.04e-24!52;UBERON:0000033!2.52e-23!63;UBERON:0000955!2.59e-22!50;UBERON:0006238!2.59e-22!50;UBERON:0002346!4.77e-22!71;UBERON:0003075!4.77e-22!71;UBERON:0007284!4.77e-22!71;UBERON:0002616!1.27e-21!49;UBERON:0004121!3.71e-21!102;UBERON:0000924!3.71e-21!102;UBERON:0006601!3.71e-21!102;UBERON:0003056!6.68e-19!49;UBERON:0002020!1.16e-18!34;UBERON:0003080!5.99e-18!40;UBERON:0002780!3.88e-17!39;UBERON:0001890!3.88e-17!39;UBERON:0006240!3.88e-17!39;UBERON:0002791!8.92e-15!29;UBERON:0003528!8.92e-15!29;UBERON:0001893!8.92e-15!29;UBERON:0007811!4.17e-13!86;UBERON:0000153!1.32e-12!94;UBERON:0000956!2.48e-09!21;UBERON:0001869!2.48e-09!21;UBERON:0000203!2.48e-09!21;UBERON:0002619!3.34e-07!17;UBERON:0002420!5.53e-07!8;UBERON:0007245!5.53e-07!8;UBERON:0010009!5.53e-07!8;UBERON:0010011!5.53e-07!8;UBERON:0000454!5.53e-07!8;UBERON:0003076!8.83e-07!12;UBERON:0003057!8.83e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,1.70e-32,34;UBERON:0001017,3.92e-32,73;UBERON:0000073,3.24e-31,54;UBERON:0001016,6.76e-31,75;UBERON:0001049,1.20e-28,52;UBERON:0005068,1.20e-28,52;UBERON:0006241,1.20e-28,52;UBERON:0007135,1.20e-28,52;UBERON:0003528,2.17e-25,29;UBERON:0002791,2.17e-25,29;UBERON:0001893,2.17e-25,29;UBERON:0002346,6.70e-25,64;UBERON:0003075,6.70e-25,64;UBERON:0007284,6.70e-25,64;UBERON:0004121,1.31e-23,95;UBERON:0000924,1.31e-23,95;UBERON:0006601,1.31e-23,95;UBERON:0000955,3.29e-22,47;UBERON:0006238,3.29e-22,47;UBERON:0003080,9.97e-22,40;UBERON:0010371,1.83e-21,73;UBERON:0002616,3.86e-21,46;UBERON:0002780,2.06e-20,39;UBERON:0001890,2.06e-20,39;UBERON:0006240,2.06e-20,39;UBERON:0003056,1.52e-18,49;UBERON:0000956,1.79e-15,21;UBERON:0001869,1.79e-15,21;UBERON:0000203,1.79e-15,21;UBERON:0010314,1.54e-14,92;UBERON:0002619,1.30e-11,17;UBERON:0002420,1.84e-11,8;UBERON:0007245,1.84e-11,8;UBERON:0010009,1.84e-11,8;UBERON:0010011,1.84e-11,8;UBERON:0000454,1.84e-11,8;UBERON:0002240,1.30e-09,6;UBERON:0005174,1.30e-09,6;UBERON:0001137,1.30e-09,6;UBERON:0002021,8.35e-09,10;UBERON:0000411,8.35e-09,10;UBERON:0001950,8.35e-09,10;UBERON:0001948,2.05e-08,5;UBERON:0002315,2.05e-08,5;UBERON:0000369,2.13e-07,5;UBERON:0002435,2.13e-07,5;UBERON:0000204,2.13e-07,5;UBERON:0010082,2.13e-07,5;UBERON:0003076,2.41e-07,12;UBERON:0003057,2.41e-07,12;UBERON:0000025,3.45e-07,114;UBERON:0002950,4.08e-07,4;UBERON:0001891,4.08e-07,4;UBERON:0009616,4.08e-07,4;UBERON:0010286,4.08e-07,4 | |||
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|short_description=p1@ENSMUST00000164156 | |||
}} |
Latest revision as of 21:28, 4 August 2015
Short description: | p1@ENSMUST00000164156 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENSMUST00000164156_5end |
Coexpression cluster: | MCL_coexpression_mm9:159 |
Association with transcript: | 0bp_to_ENSMUST00000164156_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.96e-30 | 23 |
neuroblast (sensu Vertebrata) | 1.96e-30 | 23 |
neuron | 9.18e-24 | 33 |
neuronal stem cell | 9.18e-24 | 33 |
neuroblast | 9.18e-24 | 33 |
electrically signaling cell | 9.18e-24 | 33 |
electrically responsive cell | 8.37e-19 | 39 |
electrically active cell | 8.37e-19 | 39 |
neural cell | 2.77e-16 | 43 |
ectodermal cell | 9.97e-16 | 44 |
neurectodermal cell | 9.97e-16 | 44 |
neuron of cerebral cortex | 1.95e-07 | 6 |
embryonic cell | 4.50e-07 | 70 |