FFCP PHASE1:Mm9::chrX:148667771..148667803,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=20591|HGNC=|UniProt=P41230|association_with_transcript=0bp_to_ENSMUST00000112588,ENSMUST00000154938,NM_013668,uc009uqc.2,uc009uqd.2_5end|description=CAGE_peak_1_at_Kdm5c_5end|id=chrX:148667771..148667803,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004119!2.19e-09!130;UBERON:0000925!2.19e-09!130;UBERON:0006595!2.19e-09!130;UBERON:0001007!1.44e-08!128;UBERON:0001555!1.44e-08!128;UBERON:0007026!1.44e-08!128;UBERON:0004921!7.33e-08!126;UBERON:0004185!7.33e-08!126|ontology_enrichment_uberon_v019_2=UBERON:0004119,5.00e-08,118;UBERON:0000925,5.00e-08,118;UBERON:0006595,5.00e-08,118;UBERON:0001007,2.87e-07,116;UBERON:0001555,2.87e-07,116;UBERON:0007026,2.87e-07,116|phase1_expression=46.7634633545998,79.5663929417743,71.8898798235467,56.2583433030704,57.1021132138836,43.9843692409151,40.6485994636215,71.2760745397501,77.71537462772,84.9654230548836,55.3034037368381,53.3675743678801,68.3090912425511,75.7060684948517,37.3082933233542,68.0316898429815,67.1579403003021,49.5275599612433,49.9096538324889,46.2584720459853,36.2284416043557,42.8936909187824,43.3591649970633,79.9962113967033,64.0051894177404,56.848964447387,45.6607715928619,48.9119698196968,67.4583139070127,56.9588093257443,49.445903876133,66.6782207132613,51.0503773695193,0,26.5743490171173,27.2624818387927,31.0337421518801,55.6647068880087,41.4107732597614,65.9639917406986,57.6466858270394,49.1792749170081,44.6669524788661,31.8518949478211,32.7447487839032,24.4117180375036,29.7308710852255,29.2153709549798,30.5363794000916,28.7756250629939,29.6771213845769,21.5628846547457,59.3950425444387,66.7333170650437,60.832977644786,43.734104126111,37.8224140719159,41.2537673821954,54.2208115103722,53.9570798857474,36.1283899998522,31.5125414824293,24.9002542911119,31.9464399634897,30.6548572395762,18.4724829885986,28.7616106097669,23.4373166246148,55.1628737481101,50.2222090593889,54.6844899513593,31.7072592688222,27.6085676189517,51.8136080679256,56.4529824297412,30.3342199581307,23.1243350098716,33.5817699164044,33.7934373163736,64.0967358368742,56.6308513898916,61.9886910962544,31.547678887156,30.9519435517424,43.2419041208373,39.4802304534715,38.5827254965569,43.9902692147709,49.6763828265687,45.6452223044985,41.4506218843399,23.2314446784974,40.798280022465,40.4777393728363,52.6318898132612,48.3869038065122,36.0942159738602,30.8478883866285,24.4198844326697,22.6137327686618,44.2248338098777,25.6652954828636,10.1922095882658,21.3320010945999,26.4119070033681,27.6162253367857,24.2651733607096,50.8118264749817,66.0291603300288,42.1575674944102,53.2599953172037,52.6725277480004,56.7314123249904,55.0137638017072,49.6224344112674,44.1089735567161,68.9673959978903,48.8745826389301,49.538190909193,44.4858837355375,52.5602813935737,56.2455293636858,54.0536107532554,42.7459963636859,53.8278036510579,51.6023251521355,32.8293441146222,17.3971791988088,29.8615033621702,30.7070810779887,33.3975440057597,42.4711710141482,31.2883776346098,42.4487659168349,32.4149349512914,38.6134206101263,41.550460450929,41.1787072719408,31.3376220457757,50.5060454127538,63.6288966087621,42.9916935290594,53.2983904223834,58.9255837737646,51.7757758541605,58.2917427296067,62.0305416585405,87.4417393097873,84.2870852367413,72.8058408646104,75.1311300180062,44.4967336827977,62.8386783249851,59.2028683087683,67.7023228782134,51.7489093728082,16.8531164955176,21.6172241976361,23.8697339492298,63.5876121683991,52.2993113757844,51.6778116393113,61.5536312521547,53.3231068035464,49.2112090110737,55.5756127953475,54.7277738855223,53.5952921465308,49.6970746738711,48.5935693674122,49.2898362038803,44.1523962024504,48.7401255946132,41.4697833969549,33.6463917702604,49.188404717298,94.4997719333662,84.0952801990071,67.1857989185987,62.471664730458,52.3201892967699,48.6057294342256,55.8168890050624,58.5894928426682,57.8925455084304,50.7272780549954,55.2937459360593,52.1265956747815,63.9482205750714,50.3338868846364,68.9480379100275,65.5174789006868,49.5033221487543,61.0087057335952,61.9892546201942,54.9858585182348,62.2587483808079,58.2127305089644,55.2687334466009,53.5824837165956,54.0075623774329,47.3845109459714,51.8792097402511,64.2353657006962,58.1814625535081,57.5647007705226,66.3352596940405,67.2884275709243,65.6934697596063,60.4161888646702,43.2901055489344,44.4789489364692,46.0058260887535,37.9583766621873,49.3019523521006,68.9540336795615,43.4141740723027,62.2352142558744,45.2645315908181,46.8043787073097,63.3933758359481,54.3184274480602,59.1419425687025,62.9823527981227,61.6533029894776,67.7113758066562,59.9013547603526,44.5144026194038,62.6657240823924,60.3016998153916,61.4758535442588,48.7467327419694,37.6978209848181,20.1245103012923,65.4046483115318,72.0194907855352,30.9862638676438,33.2881189921857,37.5411024912587,40.1428774254953,49.8502986677686,57.7849341559025,52.7787324445357,63.0877626594737,63.9432194616471,48.4060867648903,56.2686875328103,50.560263418657,60.0837422478716,39.8438432363041,63.7310982585126,67.8429949972242,52.2867139524979,67.8027205417121,51.7706039525855,58.0245720410406,52.6042989118667,51.1119766138484,59.3556804690353,62.1018998846734,57.6295093765133,46.5323173731207,41.3536958926277,61.3111310395483,70.6304677452492,59.8186150839484,44.9380279595,63.0213829109586,60.5398640103291,62.5864142292249,60.1183392047307,57.0780216326626,62.6931768494081,60.8929898229199,68.9934821707308,81.3435152117069,66.1585194164886,60.1834823236402,50.6998299825143,65.8617140215462,76.6370448500136,77.802786479159,61.2109756922687,25.2178410734293,57.5834868288764,61.7096735210035,53.336023882477,70.4498029197544,66.5700889001393,79.8435824490764,37.9051898886297,36.6672805087984,35.2409933201281,27.6854479224383,57.5731508317666,54.8962561242491,51.086526208712,59.1719877720946,58.0844419564832,52.0576377045408,54.4686273229964,58.6333310044226,78.9355187347019,44.1150912291717,9.58277995763124,55.0220889441842,43.0192075188454,45.1126756958191,47.9182945102382,45.6181538825101,50.4636126176742,43.3580601530354,49.8081886022127,27.5405897741647,20.4501304443084,48.6657125767395,56.9657854965361,57.5181360123033,46.5116546260506,55.8563290482542,52.4518776622539,54.5687340820659,42.5345838262782,66.334957615933,45.8002907996549,54.4461399738939,59.449307251249,53.3013602687425,55.86715924279,44.4391551885814,38.4035699337132,33.0146992322871,32.4017309582671,40.9561939348244,66.0642313588161,71.0628302156989,77.1726164684637,51.6619267156424,50.2629139929189,31.302116082488,33.8008352929244,31.6209855512385,23.2928056722018,32.4819375877571,32.4010800111267,36.0256962579376,30.8136838109259,24.8524949640874,64.3481555021895,83.3961985408155,56.6835571103725,48.6213434136588,61.2070434873708,37.6879192322529,43.338111921315,44.0915022491234,43.9659317140787,45.9908925410111,39.7962500827676,40.9319160807785,42.5132443913266,45.073707293028,46.924778136736,52.8685997324212,44.8472341406591,45.5265760294344,46.5657067907736,34.5917462315834,41.4871795386353,38.6897257427356,42.6800780005704,42.1504608233753,45.54894012102,41.7150016905965,40.7929379506283,32.8837139297304,41.284450609142,26.9348290395714,41.1663512890884,39.7958108797276,45.4246457918355,40.5934523907231,46.8763064684174,62.2028339065485,66.6705084069414,55.0069898363644,34.4318997723918,37.5005412503176,39.8812677267125|short_description=p1@Kdm5c}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:20591 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:P41230 | |||
|association_with_transcript=0bp_to_ENSMUST00000112588,ENSMUST00000154938,NM_013668,uc009uqc.2,uc009uqd.2_5end | |||
|cluster_id=chrX:148667771..148667803,+ | |||
|description=CAGE_peak_1_at_Kdm5c_5end | |||
|id=chrX:148667771..148667803,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!2.19e-09!130;UBERON:0000925!2.19e-09!130;UBERON:0006595!2.19e-09!130;UBERON:0001007!1.44e-08!128;UBERON:0001555!1.44e-08!128;UBERON:0007026!1.44e-08!128;UBERON:0004921!7.33e-08!126;UBERON:0004185!7.33e-08!126 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,5.00e-08,118;UBERON:0000925,5.00e-08,118;UBERON:0006595,5.00e-08,118;UBERON:0001007,2.87e-07,116;UBERON:0001555,2.87e-07,116;UBERON:0007026,2.87e-07,116 | |||
|phase1_expression=46.7634633545998,79.5663929417743,71.8898798235467,56.2583433030704,57.1021132138836,43.9843692409151,40.6485994636215,71.2760745397501,77.71537462772,84.9654230548836,55.3034037368381,53.3675743678801,68.3090912425511,75.7060684948517,37.3082933233542,68.0316898429815,67.1579403003021,49.5275599612433,49.9096538324889,46.2584720459853,36.2284416043557,42.8936909187824,43.3591649970633,79.9962113967033,64.0051894177404,56.848964447387,45.6607715928619,48.9119698196968,67.4583139070127,56.9588093257443,49.445903876133,66.6782207132613,51.0503773695193,0,26.5743490171173,27.2624818387927,31.0337421518801,55.6647068880087,41.4107732597614,65.9639917406986,57.6466858270394,49.1792749170081,44.6669524788661,31.8518949478211,32.7447487839032,24.4117180375036,29.7308710852255,29.2153709549798,30.5363794000916,28.7756250629939,29.6771213845769,21.5628846547457,59.3950425444387,66.7333170650437,60.832977644786,43.734104126111,37.8224140719159,41.2537673821954,54.2208115103722,53.9570798857474,36.1283899998522,31.5125414824293,24.9002542911119,31.9464399634897,30.6548572395762,18.4724829885986,28.7616106097669,23.4373166246148,55.1628737481101,50.2222090593889,54.6844899513593,31.7072592688222,27.6085676189517,51.8136080679256,56.4529824297412,30.3342199581307,23.1243350098716,33.5817699164044,33.7934373163736,64.0967358368742,56.6308513898916,61.9886910962544,31.547678887156,30.9519435517424,43.2419041208373,39.4802304534715,38.5827254965569,43.9902692147709,49.6763828265687,45.6452223044985,41.4506218843399,23.2314446784974,40.798280022465,40.4777393728363,52.6318898132612,48.3869038065122,36.0942159738602,30.8478883866285,24.4198844326697,22.6137327686618,44.2248338098777,25.6652954828636,10.1922095882658,21.3320010945999,26.4119070033681,27.6162253367857,24.2651733607096,50.8118264749817,66.0291603300288,42.1575674944102,53.2599953172037,52.6725277480004,56.7314123249904,55.0137638017072,49.6224344112674,44.1089735567161,68.9673959978903,48.8745826389301,49.538190909193,44.4858837355375,52.5602813935737,56.2455293636858,54.0536107532554,42.7459963636859,53.8278036510579,51.6023251521355,32.8293441146222,17.3971791988088,29.8615033621702,30.7070810779887,33.3975440057597,42.4711710141482,31.2883776346098,42.4487659168349,32.4149349512914,38.6134206101263,41.550460450929,41.1787072719408,31.3376220457757,50.5060454127538,63.6288966087621,42.9916935290594,53.2983904223834,58.9255837737646,51.7757758541605,58.2917427296067,62.0305416585405,87.4417393097873,84.2870852367413,72.8058408646104,75.1311300180062,44.4967336827977,62.8386783249851,59.2028683087683,67.7023228782134,51.7489093728082,16.8531164955176,21.6172241976361,23.8697339492298,63.5876121683991,52.2993113757844,51.6778116393113,61.5536312521547,53.3231068035464,49.2112090110737,55.5756127953475,54.7277738855223,53.5952921465308,49.6970746738711,48.5935693674122,49.2898362038803,44.1523962024504,48.7401255946132,41.4697833969549,33.6463917702604,49.188404717298,94.4997719333662,84.0952801990071,67.1857989185987,62.471664730458,52.3201892967699,48.6057294342256,55.8168890050624,58.5894928426682,57.8925455084304,50.7272780549954,55.2937459360593,52.1265956747815,63.9482205750714,50.3338868846364,68.9480379100275,65.5174789006868,49.5033221487543,61.0087057335952,61.9892546201942,54.9858585182348,62.2587483808079,58.2127305089644,55.2687334466009,53.5824837165956,54.0075623774329,47.3845109459714,51.8792097402511,64.2353657006962,58.1814625535081,57.5647007705226,66.3352596940405,67.2884275709243,65.6934697596063,60.4161888646702,43.2901055489344,44.4789489364692,46.0058260887535,37.9583766621873,49.3019523521006,68.9540336795615,43.4141740723027,62.2352142558744,45.2645315908181,46.8043787073097,63.3933758359481,54.3184274480602,59.1419425687025,62.9823527981227,61.6533029894776,67.7113758066562,59.9013547603526,44.5144026194038,62.6657240823924,60.3016998153916,61.4758535442588,48.7467327419694,37.6978209848181,20.1245103012923,65.4046483115318,72.0194907855352,30.9862638676438,33.2881189921857,37.5411024912587,40.1428774254953,49.8502986677686,57.7849341559025,52.7787324445357,63.0877626594737,63.9432194616471,48.4060867648903,56.2686875328103,50.560263418657,60.0837422478716,39.8438432363041,63.7310982585126,67.8429949972242,52.2867139524979,67.8027205417121,51.7706039525855,58.0245720410406,52.6042989118667,51.1119766138484,59.3556804690353,62.1018998846734,57.6295093765133,46.5323173731207,41.3536958926277,61.3111310395483,70.6304677452492,59.8186150839484,44.9380279595,63.0213829109586,60.5398640103291,62.5864142292249,60.1183392047307,57.0780216326626,62.6931768494081,60.8929898229199,68.9934821707308,81.3435152117069,66.1585194164886,60.1834823236402,50.6998299825143,65.8617140215462,76.6370448500136,77.802786479159,61.2109756922687,25.2178410734293,57.5834868288764,61.7096735210035,53.336023882477,70.4498029197544,66.5700889001393,79.8435824490764,37.9051898886297,36.6672805087984,35.2409933201281,27.6854479224383,57.5731508317666,54.8962561242491,51.086526208712,59.1719877720946,58.0844419564832,52.0576377045408,54.4686273229964,58.6333310044226,78.9355187347019,44.1150912291717,9.58277995763124,55.0220889441842,43.0192075188454,45.1126756958191,47.9182945102382,45.6181538825101,50.4636126176742,43.3580601530354,49.8081886022127,27.5405897741647,20.4501304443084,48.6657125767395,56.9657854965361,57.5181360123033,46.5116546260506,55.8563290482542,52.4518776622539,54.5687340820659,42.5345838262782,66.334957615933,45.8002907996549,54.4461399738939,59.449307251249,53.3013602687425,55.86715924279,44.4391551885814,38.4035699337132,33.0146992322871,32.4017309582671,40.9561939348244,66.0642313588161,71.0628302156989,77.1726164684637,51.6619267156424,50.2629139929189,31.302116082488,33.8008352929244,31.6209855512385,23.2928056722018,32.4819375877571,32.4010800111267,36.0256962579376,30.8136838109259,24.8524949640874,64.3481555021895,83.3961985408155,56.6835571103725,48.6213434136588,61.2070434873708,37.6879192322529,43.338111921315,44.0915022491234,43.9659317140787,45.9908925410111,39.7962500827676,40.9319160807785,42.5132443913266,45.073707293028,46.924778136736,52.8685997324212,44.8472341406591,45.5265760294344,46.5657067907736,34.5917462315834,41.4871795386353,38.6897257427356,42.6800780005704,42.1504608233753,45.54894012102,41.7150016905965,40.7929379506283,32.8837139297304,41.284450609142,26.9348290395714,41.1663512890884,39.7958108797276,45.4246457918355,40.5934523907231,46.8763064684174,62.2028339065485,66.6705084069414,55.0069898363644,34.4318997723918,37.5005412503176,39.8812677267125 | |||
|short_description=p1@Kdm5c | |||
}} |
Revision as of 02:32, 6 August 2015
Short description: | p1@Kdm5c |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Kdm5c_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000112588, ENSMUST00000154938, NM_013668, uc009uqc.2, uc009uqd.2_5end |
EntrezGene: | 20591 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 5.00e-08 | 118 |
endoderm | 5.00e-08 | 118 |
presumptive endoderm | 5.00e-08 | 118 |
digestive system | 2.87e-07 | 116 |
digestive tract | 2.87e-07 | 116 |
primitive gut | 2.87e-07 | 116 |