FFCP PHASE1:Mm9::chrX:98579104..98579116,+: Difference between revisions
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{{FFCP|EntrezGene=14618|HGNC=|MCL_coexpression_id=20|UniProt=P28230|association_with_transcript=29bp_to_ENSMUST00000119190_5end|description=CAGE_peak_7_at_Gjb1_5end|id=chrX:98579104..98579116,+|ontology_enrichment_celltype=CL:0000117!3.06e-08!23;CL:0000337!3.06e-08!23;CL:0000221!2.01e-07!44;CL:0000133!2.01e-07!44|ontology_enrichment_celltype_v019_2=CL:0002614,1.29e-10,3;CL:0002610,1.86e-10,3;CL:0000117,8.83e-10,23;CL:0000337,8.83e-10,23;CL:0000221,5.03e-08,44;CL:0000133,5.03e-08,44;CL:0000217,3.00e-07,2;CL:0000328,3.00e-07,2;CL:0002573,3.00e-07,2;CL:0002376,3.00e-07,2;CL:0000218,3.00e-07,2;CL:0000692,3.00e-07,2;CL:0002377,3.00e-07,2;CL:0002375,3.00e-07,2;CL:0002611,3.99e-07,2;CL:0002319,6.41e-07,43|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!1.02e-21!75;UBERON:0001016!1.02e-21!75;UBERON:0001017!1.51e-19!73;UBERON:0005743!1.51e-19!73;UBERON:0000033!4.22e-19!63;UBERON:0004121!6.75e-19!102;UBERON:0000924!6.75e-19!102;UBERON:0006601!6.75e-19!102;UBERON:0001049!9.03e-18!52;UBERON:0005068!9.03e-18!52;UBERON:0006241!9.03e-18!52;UBERON:0007135!9.03e-18!52;UBERON:0000955!2.05e-17!50;UBERON:0006238!2.05e-17!50;UBERON:0002616!2.19e-16!49;UBERON:0002346!1.21e-14!71;UBERON:0003075!1.21e-14!71;UBERON:0007284!1.21e-14!71;UBERON:0002020!3.73e-14!34;UBERON:0007811!3.54e-12!86;UBERON:0003056!5.26e-11!49;UBERON:0002791!1.08e-10!29;UBERON:0003528!1.08e-10!29;UBERON:0001893!1.08e-10!29;UBERON:0002298!2.22e-10!6;UBERON:0000153!2.53e-10!94;UBERON:0003080!4.33e-10!40;UBERON:0003076!1.22e-09!12;UBERON:0003057!1.22e-09!12;UBERON:0002780!3.41e-09!39;UBERON:0001890!3.41e-09!39;UBERON:0006240!3.41e-09!39;UBERON:0002021!1.62e-08!10;UBERON:0000411!1.62e-08!10;UBERON:0001950!1.62e-08!10;UBERON:0000956!2.35e-07!21;UBERON:0001869!2.35e-07!21;UBERON:0000203!2.35e-07!21;UBERON:0002950!2.81e-07!4;UBERON:0001891!2.81e-07!4;UBERON:0009616!2.81e-07!4|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.33e-29,54;UBERON:0001016,2.86e-28,75;UBERON:0001049,5.12e-25,52;UBERON:0005068,5.12e-25,52;UBERON:0006241,5.12e-25,52;UBERON:0007135,5.12e-25,52;UBERON:0001017,1.47e-24,73;UBERON:0004121,4.44e-23,95;UBERON:0000924,4.44e-23,95;UBERON:0006601,4.44e-23,95;UBERON:0000955,2.95e-20,47;UBERON:0006238,2.95e-20,47;UBERON:0002346,1.68e-19,64;UBERON:0003075,1.68e-19,64;UBERON:0007284,1.68e-19,64;UBERON:0002616,1.60e-18,46;UBERON:0010371,2.77e-18,73;UBERON:0003076,8.80e-16,12;UBERON:0003057,8.80e-16,12;UBERON:0002020,6.76e-15,34;UBERON:0010314,1.46e-13,92;UBERON:0002950,2.43e-13,4;UBERON:0001891,2.43e-13,4;UBERON:0009616,2.43e-13,4;UBERON:0010286,2.43e-13,4;UBERON:0003080,1.60e-12,40;UBERON:0002780,5.23e-11,39;UBERON:0001890,5.23e-11,39;UBERON:0006240,5.23e-11,39;UBERON:0003528,7.08e-11,29;UBERON:0002791,7.08e-11,29;UBERON:0001893,7.08e-11,29;UBERON:0002038,1.29e-10,3;UBERON:0009663,1.29e-10,3;UBERON:0009661,1.29e-10,3;UBERON:0000125,1.29e-10,3;UBERON:0002308,1.29e-10,3;UBERON:0004684,1.86e-10,3;UBERON:0002275,1.86e-10,3;UBERON:0003056,1.05e-09,49;UBERON:0004111,4.31e-09,122;UBERON:0000025,5.39e-09,114;UBERON:0004733,9.09e-09,6;UBERON:0004732,9.09e-09,6;UBERON:0002028,9.09e-09,6;UBERON:0007277,9.09e-09,6;UBERON:0011216,1.08e-08,194;UBERON:0002240,1.58e-08,6;UBERON:0005174,1.58e-08,6;UBERON:0001137,1.58e-08,6;UBERON:0001896,5.09e-08,2;UBERON:0002298,5.09e-08,2;UBERON:0005290,5.09e-08,2;UBERON:0010096,5.09e-08,2;UBERON:0002256,3.99e-07,2;UBERON:0002021,4.24e-07,10;UBERON:0000411,4.24e-07,10;UBERON:0001950,4.24e-07,10;UBERON:0002420,8.36e-07,8;UBERON:0007245,8.36e-07,8;UBERON:0010009,8.36e-07,8;UBERON:0010011,8.36e-07,8;UBERON:0000454,8.36e-07,8|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.935476191661768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0.299600110518405,0.384218305321555,0.103689612308478,0,0,3.71346279724945,2.20868540951614,0,0,0,3.30347642998166,4.08599481872601,4.14737639791857,0,0.0914876436024097,0,8.93385596804419,2.8138130501584,4.88954392885792,1.17851434189467,0.427115042397309,0,4.46784540665786,1.88928900266964,0,0,0,0,0,0,0.280888840263504,0,0,0,1.54927761754349,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0.161766849947409,0,0,0,1.46390398505774,2.30391377494801,0,0,0,0,2.69623150928681,4.11750542536764,0,3.12883776346098,0.767146371990992,5.61027720310812,3.73154905055843,0,0,0,0.631325567659422,0,0,0.180062129805349,0,0.136072998302656,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3131894342054,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.488894929326078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.31193421929193,9.02529986759964,0,0.252470927204373,0,0,0,0,0,0,0,0,0,1.60660658210904,0,0,0,0,0,0.242780636154981,0,0,0.295301892880773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120625849856312,0,0,0,12.7943458387252,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14579102687879,0.68741272937475,1.37016503954128,3.0215755895588,0.675022500231806,0.45032120322422,2.26571204492102,1.55328093525546,0.103787347584177,0.399024873401031,0.170733605754134,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115884325944855,0,0,0.147198920134397,0,0,0,0.145346416632329,0,0,0,0,0,0,0.118635018124174,0,0,0.309873682371932,0,0,0,0,0.191288332068843,0.220591419119515,0.231867835620421|short_description=p7@Gjb1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:14618 | |||
|HGNC= | |||
|MCL_coexpression_id=20 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:P28230 | |||
|association_with_transcript=29bp_to_ENSMUST00000119190_5end | |||
|cluster_id=chrX:98579104..98579116,+ | |||
|description=CAGE_peak_7_at_Gjb1_5end | |||
|id=chrX:98579104..98579116,+ | |||
|ontology_enrichment_celltype=CL:0000117!3.06e-08!23;CL:0000337!3.06e-08!23;CL:0000221!2.01e-07!44;CL:0000133!2.01e-07!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0002614,1.29e-10,3;CL:0002610,1.86e-10,3;CL:0000117,8.83e-10,23;CL:0000337,8.83e-10,23;CL:0000221,5.03e-08,44;CL:0000133,5.03e-08,44;CL:0000217,3.00e-07,2;CL:0000328,3.00e-07,2;CL:0002573,3.00e-07,2;CL:0002376,3.00e-07,2;CL:0000218,3.00e-07,2;CL:0000692,3.00e-07,2;CL:0002377,3.00e-07,2;CL:0002375,3.00e-07,2;CL:0002611,3.99e-07,2;CL:0002319,6.41e-07,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.02e-21!75;UBERON:0001016!1.02e-21!75;UBERON:0001017!1.51e-19!73;UBERON:0005743!1.51e-19!73;UBERON:0000033!4.22e-19!63;UBERON:0004121!6.75e-19!102;UBERON:0000924!6.75e-19!102;UBERON:0006601!6.75e-19!102;UBERON:0001049!9.03e-18!52;UBERON:0005068!9.03e-18!52;UBERON:0006241!9.03e-18!52;UBERON:0007135!9.03e-18!52;UBERON:0000955!2.05e-17!50;UBERON:0006238!2.05e-17!50;UBERON:0002616!2.19e-16!49;UBERON:0002346!1.21e-14!71;UBERON:0003075!1.21e-14!71;UBERON:0007284!1.21e-14!71;UBERON:0002020!3.73e-14!34;UBERON:0007811!3.54e-12!86;UBERON:0003056!5.26e-11!49;UBERON:0002791!1.08e-10!29;UBERON:0003528!1.08e-10!29;UBERON:0001893!1.08e-10!29;UBERON:0002298!2.22e-10!6;UBERON:0000153!2.53e-10!94;UBERON:0003080!4.33e-10!40;UBERON:0003076!1.22e-09!12;UBERON:0003057!1.22e-09!12;UBERON:0002780!3.41e-09!39;UBERON:0001890!3.41e-09!39;UBERON:0006240!3.41e-09!39;UBERON:0002021!1.62e-08!10;UBERON:0000411!1.62e-08!10;UBERON:0001950!1.62e-08!10;UBERON:0000956!2.35e-07!21;UBERON:0001869!2.35e-07!21;UBERON:0000203!2.35e-07!21;UBERON:0002950!2.81e-07!4;UBERON:0001891!2.81e-07!4;UBERON:0009616!2.81e-07!4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.33e-29,54;UBERON:0001016,2.86e-28,75;UBERON:0001049,5.12e-25,52;UBERON:0005068,5.12e-25,52;UBERON:0006241,5.12e-25,52;UBERON:0007135,5.12e-25,52;UBERON:0001017,1.47e-24,73;UBERON:0004121,4.44e-23,95;UBERON:0000924,4.44e-23,95;UBERON:0006601,4.44e-23,95;UBERON:0000955,2.95e-20,47;UBERON:0006238,2.95e-20,47;UBERON:0002346,1.68e-19,64;UBERON:0003075,1.68e-19,64;UBERON:0007284,1.68e-19,64;UBERON:0002616,1.60e-18,46;UBERON:0010371,2.77e-18,73;UBERON:0003076,8.80e-16,12;UBERON:0003057,8.80e-16,12;UBERON:0002020,6.76e-15,34;UBERON:0010314,1.46e-13,92;UBERON:0002950,2.43e-13,4;UBERON:0001891,2.43e-13,4;UBERON:0009616,2.43e-13,4;UBERON:0010286,2.43e-13,4;UBERON:0003080,1.60e-12,40;UBERON:0002780,5.23e-11,39;UBERON:0001890,5.23e-11,39;UBERON:0006240,5.23e-11,39;UBERON:0003528,7.08e-11,29;UBERON:0002791,7.08e-11,29;UBERON:0001893,7.08e-11,29;UBERON:0002038,1.29e-10,3;UBERON:0009663,1.29e-10,3;UBERON:0009661,1.29e-10,3;UBERON:0000125,1.29e-10,3;UBERON:0002308,1.29e-10,3;UBERON:0004684,1.86e-10,3;UBERON:0002275,1.86e-10,3;UBERON:0003056,1.05e-09,49;UBERON:0004111,4.31e-09,122;UBERON:0000025,5.39e-09,114;UBERON:0004733,9.09e-09,6;UBERON:0004732,9.09e-09,6;UBERON:0002028,9.09e-09,6;UBERON:0007277,9.09e-09,6;UBERON:0011216,1.08e-08,194;UBERON:0002240,1.58e-08,6;UBERON:0005174,1.58e-08,6;UBERON:0001137,1.58e-08,6;UBERON:0001896,5.09e-08,2;UBERON:0002298,5.09e-08,2;UBERON:0005290,5.09e-08,2;UBERON:0010096,5.09e-08,2;UBERON:0002256,3.99e-07,2;UBERON:0002021,4.24e-07,10;UBERON:0000411,4.24e-07,10;UBERON:0001950,4.24e-07,10;UBERON:0002420,8.36e-07,8;UBERON:0007245,8.36e-07,8;UBERON:0010009,8.36e-07,8;UBERON:0010011,8.36e-07,8;UBERON:0000454,8.36e-07,8 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.935476191661768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0.299600110518405,0.384218305321555,0.103689612308478,0,0,3.71346279724945,2.20868540951614,0,0,0,3.30347642998166,4.08599481872601,4.14737639791857,0,0.0914876436024097,0,8.93385596804419,2.8138130501584,4.88954392885792,1.17851434189467,0.427115042397309,0,4.46784540665786,1.88928900266964,0,0,0,0,0,0,0.280888840263504,0,0,0,1.54927761754349,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0.161766849947409,0,0,0,1.46390398505774,2.30391377494801,0,0,0,0,2.69623150928681,4.11750542536764,0,3.12883776346098,0.767146371990992,5.61027720310812,3.73154905055843,0,0,0,0.631325567659422,0,0,0.180062129805349,0,0.136072998302656,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3131894342054,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.488894929326078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.31193421929193,9.02529986759964,0,0.252470927204373,0,0,0,0,0,0,0,0,0,1.60660658210904,0,0,0,0,0,0.242780636154981,0,0,0.295301892880773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120625849856312,0,0,0,12.7943458387252,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14579102687879,0.68741272937475,1.37016503954128,3.0215755895588,0.675022500231806,0.45032120322422,2.26571204492102,1.55328093525546,0.103787347584177,0.399024873401031,0.170733605754134,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115884325944855,0,0,0.147198920134397,0,0,0,0.145346416632329,0,0,0,0,0,0,0.118635018124174,0,0,0.309873682371932,0,0,0,0,0.191288332068843,0.220591419119515,0.231867835620421 | |||
|short_description=p7@Gjb1 | |||
}} |
Revision as of 11:09, 6 August 2015
Short description: | p7@Gjb1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Gjb1_5end |
Coexpression cluster: | MCL_coexpression_mm9:20 |
Association with transcript: | 29bp_to_ENSMUST00000119190_5end |
EntrezGene: | 14618 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of the substantia nigra | 1.29e-10 | 3 |
raphe nuclei neuron | 1.86e-10 | 3 |
CNS neuron (sensu Vertebrata) | 8.83e-10 | 23 |
neuroblast (sensu Vertebrata) | 8.83e-10 | 23 |
ectodermal cell | 5.03e-08 | 44 |
neurectodermal cell | 5.03e-08 | 44 |
insulating cell | 3.00e-07 | 2 |
myelin accumulating cell | 3.00e-07 | 2 |
Schwann cell | 3.00e-07 | 2 |
non-myelinating Schwann cell | 3.00e-07 | 2 |
myelinating Schwann cell;;Schwann cell | 3.00e-07 | 2 |
terminal Schwann cell | 3.00e-07 | 2 |
immature Schwann cell | 3.00e-07 | 2 |
Schwann cell precursor | 3.00e-07 | 2 |
neuron of the dorsal spinal cord | 3.99e-07 | 2 |
neural cell | 6.41e-07 | 43 |