FFCP PHASE1:Hg19::chr11:44117206..44117218,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=2132 | |EntrezGene=entrezgene:2132 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=3513 | |HGNC=HGNC:3513 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt=E9PJA5 | |UniProt=uniprot:E9PJA5 | ||
|association_with_transcript=-4bp_to_ENST00000532479_5end | |association_with_transcript=-4bp_to_ENST00000532479_5end | ||
|cluster_id=chr11:44117206..44117218,+ | |||
|coexpression_cluster_id=C2131 | |coexpression_cluster_id=C2131 | ||
|description=CAGE_peak_2_at_EXT2_5end | |description=CAGE_peak_2_at_EXT2_5end |
Revision as of 22:14, 23 July 2015
Short description: | p2@EXT2 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_EXT2_5end |
Coexpression cluster: | C2131_Smooth_Fibroblast_gall_leiomyoma_bone_Chondrocyte_mesenchymal |
Association with transcript: | -4bp_to_ENST00000532479_5end |
EntrezGene: | 2132 |
HGNC: | 3513 |
UniProt: | E9PJA5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p2@EXT2 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.25e-15 | 76 |
muscle precursor cell | 2.07e-15 | 58 |
myoblast | 2.07e-15 | 58 |
multi-potent skeletal muscle stem cell | 2.07e-15 | 58 |
mesodermal cell | 5.88e-15 | 121 |
embryonic cell | 1.05e-14 | 250 |
muscle cell | 2.20e-14 | 55 |
smooth muscle cell | 1.22e-13 | 43 |
smooth muscle myoblast | 1.22e-13 | 43 |
electrically responsive cell | 2.65e-12 | 61 |
Showing 1 to 10 of 12 entries
Ontology term | p-value | n |
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multilaminar epithelium | 1.21e-16 | 83 |
dense mesenchyme tissue | 2.04e-14 | 73 |
somite | 2.59e-14 | 71 |
presomitic mesoderm | 2.59e-14 | 71 |
presumptive segmental plate | 2.59e-14 | 71 |
dermomyotome | 2.59e-14 | 71 |
trunk paraxial mesoderm | 2.59e-14 | 71 |
paraxial mesoderm | 5.19e-14 | 72 |
presumptive paraxial mesoderm | 5.19e-14 | 72 |
epithelial vesicle | 5.84e-14 | 78 |
Showing 1 to 10 of 41 entries