CL:0000136: Difference between revisions
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|located_in= | |located_in= | ||
|name=fat cell | |name=fat cell | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date= | |obo_creation_date= | ||
|part_of= | |part_of= | ||
Latest revision as of 16:30, 12 September 2014
| Name: | fat cell | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Definition: | "A fat-storing cell found mostly in the abdominal cavity and subcutaneous tissue of mammals. Fat is usually stored in the form of triglycerides." [MESH:A.11.329.114] | ||
| Xrefs: |
| ||
| Synonyms: |
"adipocyte" EXACT [] "adipose cell" EXACT [] | ||
| Alt_id: | CL:0000450 |
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | CL:0000325(stuff accumulating cell),CL:0002320(connective tissue cell) |
|---|---|
| develops_from: | CL:0000134(mesenchymal cell) |
Children
| is a: | CL:0002521 (subcutaneous fat cell),CL:0002615 (adipocyte of omentum tissue),CL:0002616 (perirenal adipocyte cell),CL:0002617 (adipocyte of breast) |
|---|---|
| derives from: | FF:0000266 (human mature adipocyte sample),FF:0000690 (human mesenchymal stem cells adipose derived, 0 minutes after adipogenic induction sample),FF:0000691 (human mesenchymal stem cells adipose derived, 15 minutes after adipogenic induction sample),FF:0000692 (human mesenchymal stem cells adipose derived, 30 minutes after adipogenic induction sample),FF:0000693 (human mesenchymal stem cells adipose derived, 45 minutes after adipogenic induction sample),FF:0000694 (human mesenchymal stem cells adipose derived, 60 minutes after adipogenic induction sample),FF:0000695 (human mesenchymal stem cells adipose derived, 80 minutes after adipogenic induction sample),FF:0000696 (human mesenchymal stem cells adipose derived, 100 minutes after adipogenic induction sample),FF:0000697 (human mesenchymal stem cells adipose derived, 120 minutes after adipogenic induction sample),FF:0000698 (human mesenchymal stem cells adipose derived, 150 minutes after adipogenic induction sample),FF:0000699 (human mesenchymal stem cells adipose derived, 180 minutes after adipogenic induction sample),FF:0000700 (human mesenchymal stem cells adipose derived, 12 hours after adipogenic induction sample),FF:0000701 (human mesenchymal stem cells adipose derived, 24 hours after adipogenic induction sample),FF:0000702 (human mesenchymal stem cells adipose derived, 2 days after adipogenic induction sample),FF:0000703 (human mesenchymal stem cells adipose derived, 4 days after adipogenic induction sample),FF:0000704 (human mesenchymal stem cells adipose derived, 8 days after adipogenic induction sample),FF:0000705 (human mesenchymal stem cells adipose derived, 12 days after adipogenic induction sample),FF:0000706 (human mesenchymal stem cells adipose derived, 14 days after adipogenic induction sample),FF:0000707 (human mesenchymal stem cells adipose derived, untreated control sample),FF:0000731 (human adipocyte differentiation day4 sample),FF:0000732 (human adipocyte differentiation day8 sample),FF:0000733 (human adipocyte differentiation day12 sample) |
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 11259-116F8 (Adipocyte - subcutaneous, donor1)
- 11327-117E4 (Adipocyte - breast, donor2)
- 11336-117F4 (Adipocyte - subcutaneous, donor2)
- 11376-118A8 (Adipocyte - breast, donor1)
- 11408-118E4 (Adipocyte - subcutaneous, donor3)
- 11473-119C6 (Adipocyte - omental, donor1)
- 11474-119C7 (Adipocyte - omental, donor2)
- 11475-119C8 (Adipocyte - omental, donor3)
- 11476-119C9 (Adipocyte - perirenal, donor1)
- 11477-119D1
... further results Mouse (Mus musculus)
- 11259-116F8 (Adipocyte - subcutaneous, donor1)
- 11327-117E4 (Adipocyte - breast, donor2)
- 11336-117F4 (Adipocyte - subcutaneous, donor2)
- 11376-118A8 (Adipocyte - breast, donor1)
- 11408-118E4 (Adipocyte - subcutaneous, donor3)
- 11473-119C6 (Adipocyte - omental, donor1)
- 11474-119C7 (Adipocyte - omental, donor2)
- 11475-119C8 (Adipocyte - omental, donor3)
- 11476-119C9 (Adipocyte - perirenal, donor1)
- 11477-119D1
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000136 (fat cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 1.74e-109 | FFCP PHASE2:Hg19::chr6:53305337..53305366,-#_eb616e72b92870193c17d0a6cb2c08ba | p@chr6:53305337..53305366, - |
| 1.74e-109 | FFCP PHASE1:Hg19::chr6:53305337..53305366,-#_eb616e72b92870193c17d0a6cb2c08ba | p@chr6:53305337..53305366, - |
| 1.05e-105 | FFCP PHASE2:Hg19::chr15:90207816..90207828,-#_e8a4abd4042a2d7c8c969ec09af18d13 | p@chr15:90207816..90207828, - |
| 1.05e-105 | FFCP PHASE1:Hg19::chr15:90207816..90207828,-#_e8a4abd4042a2d7c8c969ec09af18d13 | p@chr15:90207816..90207828, - |
| 2.13e-105 | FFCP PHASE1:Hg19::chr7:155044107..155044121,-#_b74b071a155d8ed6331815eb22cd3e80 | p@chr7:155044107..155044121, - |
| 2.13e-105 | FFCP PHASE2:Hg19::chr7:155044107..155044121,-#_b74b071a155d8ed6331815eb22cd3e80 | p@chr7:155044107..155044121, - |
| 3.16e-105 | FFCP PHASE1:Hg19::chr3:186575301..186575315,+#_2ef472b43a98bccf28f9f6868f382d7f | p@chr3:186575301..186575315, + |
| 3.16e-105 | FFCP PHASE1:Hg19::chr5:76435093..76435109,+#_2ef472b43a98bccf28f9f6868f382d7f | p1@ENST00000511547, p1@ENST00000515356 |
| 3.16e-105 | FFCP PHASE2:Hg19::chr3:186575301..186575315,+#_2ef472b43a98bccf28f9f6868f382d7f | p@chr3:186575301..186575315, + |
| 3.16e-105 | FFCP PHASE2:Hg19::chr5:76435093..76435109,+#_2ef472b43a98bccf28f9f6868f382d7f | p1@ENST00000511547, p1@ENST00000515356 |
| 4.49e-105 | FFCP PHASE1:Hg19::chr11:111888022..111888037,+#_37b40cc73b13b7acfd50b56fd0dcb6f8 | p17@DIXDC1 |
| 4.49e-105 | FFCP PHASE2:Hg19::chr11:111888022..111888037,+#_37b40cc73b13b7acfd50b56fd0dcb6f8 | p17@DIXDC1 |
| 1.87e-104 | FFCP PHASE1:Hg19::chr17:41003393..41003400,+#_ecabc7850e8180768498932f3bb614a5 | p2@CU690716 |
| 1.87e-104 | FFCP PHASE2:Hg19::chr17:41003393..41003400,+#_ecabc7850e8180768498932f3bb614a5 | p2@CU690716 |
| 1.18e-100 | FFCP PHASE1:Hg19::chr16:68325453..68325473,+#_9f288e006528f363725aa1b077b238c5 | p@chr16:68325453..68325473, + |
| 1.18e-100 | FFCP PHASE2:Hg19::chr16:68325453..68325473,+#_9f288e006528f363725aa1b077b238c5 | p@chr16:68325453..68325473, + |
| 3.26e-96 | FFCP PHASE1:Hg19::chr15:90224806..90224821,-#_7e0f40daa142600da47b6fac3c8d0d43 | p@chr15:90224806..90224821, - |
| 3.26e-96 | FFCP PHASE2:Hg19::chr15:90224806..90224821,-#_7e0f40daa142600da47b6fac3c8d0d43 | p@chr15:90224806..90224821, - |
| 4.53e-96 | FFCP PHASE2:Hg19::chr9:653255..653267,+#_20053535a6b4dd3ee0015069ea20a24a | p@chr9:653255..653267, + |
| 4.53e-96 | FFCP PHASE1:Hg19::chr3:186572221..186572231,+#_20053535a6b4dd3ee0015069ea20a24a | p@chr3:186572221..186572231, + |
| 4.53e-96 | FFCP PHASE2:Hg19::chr3:186572221..186572231,+#_20053535a6b4dd3ee0015069ea20a24a | p@chr3:186572221..186572231, + |
| 4.53e-96 | FFCP PHASE1:Hg19::chr9:653255..653267,+#_20053535a6b4dd3ee0015069ea20a24a | p@chr9:653255..653267, + |
| 5.65e-96 | FFCP PHASE1:Hg19::chr11:63273811..63273822,+#_93fc112895f2e93669e0eb81b2c59c36 | p6@LGALS12 |
| 5.65e-96 | FFCP PHASE2:Hg19::chr11:63273811..63273822,+#_93fc112895f2e93669e0eb81b2c59c36 | p6@LGALS12 |
| 1.15e-93 | FFCP PHASE2:Hg19::chr3:186570986..186570997,+#_8abdbb669aaceafeae56e3aa9a4e22c3 | p3@ADIPOQ |
| 1.15e-93 | FFCP PHASE1:Hg19::chr3:186570986..186570997,+#_8abdbb669aaceafeae56e3aa9a4e22c3 | p3@ADIPOQ |
| 2.49e-93 | FFCP PHASE2:Hg19::chr1:96090982..96090996,+#_38267df68066bf5033b2c10c4bd562fd | p@chr1:96090982..96090996, + |
| 2.49e-93 | FFCP PHASE1:Hg19::chr1:96090982..96090996,+#_38267df68066bf5033b2c10c4bd562fd | p@chr1:96090982..96090996, + |
| 6.18e-93 | FFCP PHASE1:Hg19::chr3:9908708..9908727,-#_e7388b4db503df75a827c6a6c657c4e5 | p@chr3:9908708..9908727, - |
| 6.18e-93 | FFCP PHASE2:Hg19::chr3:9908708..9908727,-#_e7388b4db503df75a827c6a6c657c4e5 | p@chr3:9908708..9908727, - |
| 9.32e-93 | FFCP PHASE2:Hg19::chrX:99848351..99848362,+#_aac86a416654ded633cfb65ad7e20ccb | p4@TNMD |
| 9.32e-93 | FFCP PHASE1:Hg19::chrX:99848351..99848362,+#_aac86a416654ded633cfb65ad7e20ccb | p4@TNMD |
| 1.43e-91 | FFCP PHASE1:Hg19::chr11:111895969..111895977,+#_e170b9268104984351f8eaa4f543a800 | p8@DLAT |
| 1.43e-91 | FFCP PHASE2:Hg19::chr11:111895969..111895977,+#_e170b9268104984351f8eaa4f543a800 | p8@DLAT |
| 6.14e-89 | FFCP PHASE2:Hg19::chr11:3078838..3078876,-#_3c533e36fb445ec98e9c632d5513c95c | p6@CARS |
| 6.14e-89 | FFCP PHASE1:Hg19::chr11:3078838..3078876,-#_3c533e36fb445ec98e9c632d5513c95c | p6@CARS |
| 2.94e-88 | FFCP PHASE2:Hg19::chr9:139580642..139580653,-#_548eae20fc66129d04b5ec493d39829b | p@chr9:139580642..139580653, - |
| 2.94e-88 | FFCP PHASE1:Hg19::chr9:139580642..139580653,-#_548eae20fc66129d04b5ec493d39829b | p@chr9:139580642..139580653, - |
| 3.98e-88 | FFCP PHASE2:Hg19::chr6:11532480..11532521,+#_86e9aeee1e2739f23567d2a1ab3cc55b | p@chr6:11532480..11532521, + |
| 3.98e-88 | FFCP PHASE1:Hg19::chr6:11532480..11532521,+#_86e9aeee1e2739f23567d2a1ab3cc55b | p@chr6:11532480..11532521, + |
| 4.4e-88 | FFCP PHASE1:Hg19::chr20:33596800..33596802,-#_13f73fba7c3fbec34ce71147e1712583 | p@chr20:33596800..33596802, - |
| 4.4e-88 | FFCP PHASE2:Hg19::chr20:33596800..33596802,-#_13f73fba7c3fbec34ce71147e1712583 | p@chr20:33596800..33596802, - |
| 3.88e-87 | FFCP PHASE2:Hg19::chr3:9911748..9911751,-#_b5dd004e2fff921a1277edf52365310d | p@chr3:9911748..9911751, - |
| 3.88e-87 | FFCP PHASE1:Hg19::chr3:9911748..9911751,-#_b5dd004e2fff921a1277edf52365310d | p@chr3:9911748..9911751, - |
| 8.11e-84 | FFCP PHASE2:Hg19::chr11:46615803..46615814,-#_43c78f53c055ef7a5d37f2177925a356 | p5@AMBRA1 |
| 8.11e-84 | FFCP PHASE1:Hg19::chr11:46615803..46615814,-#_43c78f53c055ef7a5d37f2177925a356 | p5@AMBRA1 |
| 8.44e-82 | FFCP PHASE1:Hg19::chr3:9920507..9920519,-#_93b70f7cddaeee3d404b329577f32849 | p4@CIDEC |
| 8.44e-82 | FFCP PHASE2:Hg19::chr3:9920507..9920519,-#_93b70f7cddaeee3d404b329577f32849 | p4@CIDEC |
| 9.39e-82 | FFCP PHASE2:Hg19::chr15:90229728..90229753,-#_9e96023783e42284569b98f660e326dd | p@chr15:90229728..90229753, - |
| 9.39e-82 | FFCP PHASE1:Hg19::chr15:90229728..90229753,-#_9e96023783e42284569b98f660e326dd | p@chr15:90229728..90229753, - |
| 9.95e-82 | FFCP PHASE2:Hg19::chr19:4503940..4503950,-#_7f9d818e7cc91f2133c352433c824108 | p@chr19:4503940..4503950, - |
| 9.95e-82 | FFCP PHASE1:Hg19::chr19:4503940..4503950,-#_7f9d818e7cc91f2133c352433c824108 | p@chr19:4503940..4503950, - |
| 1.2e-81 | FFCP PHASE1:Hg19::chr12:109568972..109568988,+#_b5ffac62363d77f1e9fdb844da7fa7a1 | p10@ACACB |
| 1.2e-81 | FFCP PHASE2:Hg19::chr11:111794400..111794410,+#_b5ffac62363d77f1e9fdb844da7fa7a1 | p@chr11:111794400..111794410, + |
| 1.2e-81 | FFCP PHASE2:Hg19::chr12:109568972..109568988,+#_b5ffac62363d77f1e9fdb844da7fa7a1 | p10@ACACB |
| 1.2e-81 | FFCP PHASE1:Hg19::chr11:111794400..111794410,+#_b5ffac62363d77f1e9fdb844da7fa7a1 | p@chr11:111794400..111794410, + |
| 1.56e-81 | FFCP PHASE2:Hg19::chr8:19805751..19805767,+#_596f999b36ae30666bf67fcbe31400f0 | p@chr8:19805751..19805767, + |
| 1.56e-81 | FFCP PHASE1:Hg19::chr8:19805751..19805767,+#_596f999b36ae30666bf67fcbe31400f0 | p@chr8:19805751..19805767, + |
| 2.1e-81 | FFCP PHASE2:Hg19::chr15:90220927..90220956,-#_f0b71cf3dfbf6e15d0abd6a0a651c88a | p@chr15:90220927..90220956, - |
| 2.1e-81 | FFCP PHASE1:Hg19::chr11:63273651..63273660,+#_f0b71cf3dfbf6e15d0abd6a0a651c88a | p7@LGALS12 |
| 2.1e-81 | FFCP PHASE1:Hg19::chr15:90220927..90220956,-#_f0b71cf3dfbf6e15d0abd6a0a651c88a | p@chr15:90220927..90220956, - |
| 2.1e-81 | FFCP PHASE2:Hg19::chr11:63273651..63273660,+#_f0b71cf3dfbf6e15d0abd6a0a651c88a | p7@LGALS12 |
| 3.11e-80 | FFCP PHASE1:Hg19::chr15:90208830..90208847,-#_377f29a6c57cbddd3a5f0592a8f61719 | p@chr15:90208830..90208847, - |
| 3.11e-80 | FFCP PHASE2:Hg19::chr15:90208830..90208847,-#_377f29a6c57cbddd3a5f0592a8f61719 | p@chr15:90208830..90208847, - |
| 3.94e-80 | FFCP PHASE2:Hg19::chr15:90208960..90208969,-#_9efcabed350ff5cadbc15f58c6268d9c | p@chr15:90208960..90208969, - |
| 3.94e-80 | FFCP PHASE1:Hg19::chr15:90208960..90208969,-#_9efcabed350ff5cadbc15f58c6268d9c | p@chr15:90208960..90208969, - |
| 1.03e-78 | FFCP PHASE2:Hg19::chr17:41003146..41003150,+#_544c520807674e76297746e3f0d37d4e | p6@AOC3 |
| 1.03e-78 | FFCP PHASE2:Hg19::chr11:111896671..111896691,+#_544c520807674e76297746e3f0d37d4e | p@chr11:111896671..111896691, + |
| 1.03e-78 | FFCP PHASE1:Hg19::chr15:83330983..83330997,-#_544c520807674e76297746e3f0d37d4e | p10@AP3B2 |
| 1.03e-78 | FFCP PHASE1:Hg19::chr11:63273968..63273973,+#_544c520807674e76297746e3f0d37d4e | p12@LGALS12 |
| 1.03e-78 | FFCP PHASE2:Hg19::chr5:150138790..150138796,-#_544c520807674e76297746e3f0d37d4e | p18@DCTN4 |
| 1.03e-78 | FFCP PHASE1:Hg19::chr8:27023434..27023437,-#_544c520807674e76297746e3f0d37d4e | p@chr8:27023434..27023437, - |
| 1.03e-78 | FFCP PHASE2:Hg19::chr11:63273968..63273973,+#_544c520807674e76297746e3f0d37d4e | p12@LGALS12 |
| 1.03e-78 | FFCP PHASE1:Hg19::chr5:150138790..150138796,-#_544c520807674e76297746e3f0d37d4e | p18@DCTN4 |
| 1.03e-78 | FFCP PHASE1:Hg19::chr17:41003146..41003150,+#_544c520807674e76297746e3f0d37d4e | p6@AOC3 |
| 1.03e-78 | FFCP PHASE1:Hg19::chr11:111896671..111896691,+#_544c520807674e76297746e3f0d37d4e | p@chr11:111896671..111896691, + |
| 1.03e-78 | FFCP PHASE2:Hg19::chr15:83330983..83330997,-#_544c520807674e76297746e3f0d37d4e | p10@AP3B2 |
| 1.03e-78 | FFCP PHASE2:Hg19::chr8:27023434..27023437,-#_544c520807674e76297746e3f0d37d4e | p@chr8:27023434..27023437, - |
| 2.0e-78 | FFCP PHASE2:Hg19::chr17:17480405..17480422,-#_321c45f0ccf36a05c88f869dabacc0be | p12@PEMT |
| 2.0e-78 | FFCP PHASE1:Hg19::chr17:17480405..17480422,-#_321c45f0ccf36a05c88f869dabacc0be | p12@PEMT |
| 5.3e-77 | FFCP PHASE1:Hg19::chr11:63256386..63256431,-#_d2489d89c0083218ed2d6a3773ef074a | p@chr11:63256386..63256431, - |
| 5.3e-77 | FFCP PHASE2:Hg19::chr11:63256386..63256431,-#_d2489d89c0083218ed2d6a3773ef074a | p@chr11:63256386..63256431, - |
| 8.53e-77 | FFCP PHASE2:Hg19::chr19:42916741..42916746,-#_a4e664a94e76c8b47293dd98fb61776f | p@chr19:42916741..42916746, - |
| 8.53e-77 | FFCP PHASE1:Hg19::chr19:42916741..42916746,-#_a4e664a94e76c8b47293dd98fb61776f | p@chr19:42916741..42916746, - |
| 2.74e-76 | FFCP PHASE1:Hg19::chr12:50503643..50503660,+#_4190a44e3ce0462e22ab7c1827acd775 | p@chr12:50503643..50503660, + |
| 2.74e-76 | FFCP PHASE2:Hg19::chr12:50503643..50503660,+#_4190a44e3ce0462e22ab7c1827acd775 | p@chr12:50503643..50503660, + |
| 3.02e-76 | FFCP PHASE2:Hg19::chr5:74806597..74806605,+#_a3009465edce93e5fcfffa54afc2be58 | p@chr5:74806597..74806605, + |
| 3.02e-76 | FFCP PHASE1:Hg19::chr5:74806597..74806605,+#_a3009465edce93e5fcfffa54afc2be58 | p@chr5:74806597..74806605, + |
| 4.93e-76 | FFCP PHASE2:Hg19::chr3:186572288..186572301,+#_2259604f03d642a68d7051c2bc175e8f | p@chr3:186572288..186572301, + |
| 4.93e-76 | FFCP PHASE1:Hg19::chr3:186572288..186572301,+#_2259604f03d642a68d7051c2bc175e8f | p@chr3:186572288..186572301, + |
| 6.64e-76 | FFCP PHASE2:Hg19::chr15:90208696..90208713,-#_74857e4b71ca019042c8d901d48414ef | p@chr15:90208696..90208713, - |
| 6.64e-76 | FFCP PHASE1:Hg19::chr15:90208696..90208713,-#_74857e4b71ca019042c8d901d48414ef | p@chr15:90208696..90208713, - |
| 8.62e-76 | FFCP PHASE1:Hg19::chr3:186575349..186575368,+#_01a0a130322826fc0362620db1c2874e | p@chr3:186575349..186575368, + |
| 8.62e-76 | FFCP PHASE2:Hg19::chr3:186575349..186575368,+#_01a0a130322826fc0362620db1c2874e | p@chr3:186575349..186575368, + |
| 9.4e-76 | FFCP PHASE2:Hg19::chr11:111717027..111717039,-#_505ba6ff20a8334a10d62f2510c3b619 | p@chr11:111717027..111717039, - |
| 9.4e-76 | FFCP PHASE1:Hg19::chr11:111717027..111717039,-#_505ba6ff20a8334a10d62f2510c3b619 | p@chr11:111717027..111717039, - |
| 9.77e-76 | FFCP PHASE2:Hg19::chr5:76435018..76435030,+#_6031fabd6e2e08c98b85c884020f5c39 | p2@ENST00000511547, p2@ENST00000515356 |
| 9.77e-76 | FFCP PHASE1:Hg19::chr5:76435018..76435030,+#_6031fabd6e2e08c98b85c884020f5c39 | p2@ENST00000511547, p2@ENST00000515356 |
| 1.22e-75 | FFCP PHASE2:Hg19::chr15:90229776..90229789,-#_30dee1bb0935d284f6dfe1fde382b895 | p@chr15:90229776..90229789, - |
| 1.22e-75 | FFCP PHASE1:Hg19::chr15:90229776..90229789,-#_30dee1bb0935d284f6dfe1fde382b895 | p@chr15:90229776..90229789, - |
