CL:0002139: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| Line 13: | Line 13: | ||
|located_in= | |located_in= | ||
|name=endothelial cell of vascular tree | |name=endothelial cell of vascular tree | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date=2010-08-24T02:06:40Z | |obo_creation_date=2010-08-24T02:06:40Z | ||
|part_of= | |part_of= | ||
Latest revision as of 16:40, 12 September 2014
| Name: | endothelial cell of vascular tree | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Definition: | "An endothelial cell of the vascular tree, which includes blood vessels and lymphatic vessels." [GOC:dsd, GOC:tfm, PMID:12768659] | ||
| Xrefs: |
| ||
| Synonyms: |
"cubodial endothelial cell of vascular tree" NARROW [] "vascular endothelial cell" EXACT [] | ||
| Comments: | These cells are reportedly CD31-positive, CD34-positive, CD144-positive, TAL1-positive. | ||
| Created by: | tmeehan | ||
| Creation date: | 2010-08-24T02:06:40Z |
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | CL:0000115(endothelial cell) |
|---|
Children
| is a: | CL:0000071 (blood vessel endothelial cell),CL:0002138 (endothelial cell of lymphatic vessel) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 11207-116A1 (Endothelial Cells - Aortic, donor0)
- 11236-116D3 (Endothelial Cells - Lymphatic, donor1)
- 11243-116E1 (Endothelial Cells - Umbilical vein, donor1)
- 11263-116G3 (Endothelial Cells - Aortic, donor1)
- 11264-116G4 (Endothelial Cells - Artery, donor1)
- 11265-116G5 (Endothelial Cells - Microvascular, donor1)
- 11266-116G6 (Endothelial Cells - Thoracic, donor1)
- 11267-116G7 (Endothelial Cells - Vein, donor1)
- 11317-117D3 (Endothelial Cells - Lymphatic, donor2)
- 11324-117E1 (Endothelial Cells - Umbilical vein, donor2)
... further results Mouse (Mus musculus)
- 11207-116A1 (Endothelial Cells - Aortic, donor0)
- 11236-116D3 (Endothelial Cells - Lymphatic, donor1)
- 11243-116E1 (Endothelial Cells - Umbilical vein, donor1)
- 11263-116G3 (Endothelial Cells - Aortic, donor1)
- 11264-116G4 (Endothelial Cells - Artery, donor1)
- 11265-116G5 (Endothelial Cells - Microvascular, donor1)
- 11266-116G6 (Endothelial Cells - Thoracic, donor1)
- 11267-116G7 (Endothelial Cells - Vein, donor1)
- 11317-117D3 (Endothelial Cells - Lymphatic, donor2)
- 11324-117E1 (Endothelial Cells - Umbilical vein, donor2)
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002139 (endothelial cell of vascular tree), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 1.55e-154 | FFCP PHASE2:Hg19::chr2:56216687..56216727,-#_adbffa72407eed2a6247d6f81abab477 | p1@MIR216A |
| 1.55e-154 | FFCP PHASE1:Hg19::chr2:56216687..56216727,-#_adbffa72407eed2a6247d6f81abab477 | p1@MIR216A |
| 2.28e-144 | FFCP PHASE1:Hg19::chrX:15518894..15518905,+#_2cf60036a85ac774b78a7fd339c7500a | p2@BMX |
| 2.28e-144 | FFCP PHASE2:Hg19::chrX:15518894..15518905,+#_2cf60036a85ac774b78a7fd339c7500a | p2@BMX |
| 4.58e-141 | FFCP PHASE1:Hg19::chr6:3753188..3753192,-#_501e65bd357b8e4497cbea4ec7aa99ad | p@chr6:3753188..3753192, - |
| 4.58e-141 | FFCP PHASE2:Hg19::chr6:3753188..3753192,-#_501e65bd357b8e4497cbea4ec7aa99ad | p@chr6:3753188..3753192, - |
| 1.28e-139 | FFCP PHASE1:Hg19::chr18:33046982..33046991,-#_36ce236ceb6a73eb5a3805c7afdeb0e8 | p@chr18:33046982..33046991, - |
| 1.28e-139 | FFCP PHASE2:Hg19::chr18:33046982..33046991,-#_36ce236ceb6a73eb5a3805c7afdeb0e8 | p@chr18:33046982..33046991, - |
| 9.25e-136 | FFCP PHASE1:Hg19::chr12:118112251..118112272,-#_af5824a2325e8f89f2b17791d7f7445b | p12@KSR2 |
| 9.25e-136 | FFCP PHASE2:Hg19::chr12:118112251..118112272,-#_af5824a2325e8f89f2b17791d7f7445b | p12@KSR2 |
| 7.14e-135 | FFCP PHASE1:Hg19::chr11:124761247..124761258,-#_30509fff6e5a442c10eb0bca0909c69c | p@chr11:124761247..124761258, - |
| 7.14e-135 | FFCP PHASE2:Hg19::chr11:124761247..124761258,-#_30509fff6e5a442c10eb0bca0909c69c | p@chr11:124761247..124761258, - |
| 2.75e-133 | FFCP PHASE2:Hg19::chr5:176433333..176433349,-#_c6fb8db4158a0928dfa47ba97c591478 | p11@UIMC1 |
| 2.75e-133 | FFCP PHASE1:Hg19::chr5:176433333..176433349,-#_c6fb8db4158a0928dfa47ba97c591478 | p11@UIMC1 |
| 4.48e-133 | FFCP PHASE1:Hg19::chr10:99655692..99655725,-#_0458349b6f84c1e24da2003ce3cf637c | p@chr10:99655692..99655725, - |
| 4.48e-133 | FFCP PHASE2:Hg19::chr10:99655692..99655725,-#_0458349b6f84c1e24da2003ce3cf637c | p@chr10:99655692..99655725, - |
| 1.74e-130 | FFCP PHASE1:Hg19::chr17:62084108..62084111,-#_82f6c8117491a3fe8931ae7cd9db8d44 | p5@ICAM2 |
| 1.74e-130 | FFCP PHASE2:Hg19::chr17:62084108..62084111,-#_82f6c8117491a3fe8931ae7cd9db8d44 | p5@ICAM2 |
| 5.04e-127 | FFCP PHASE2:Hg19::chrX:71299684..71299699,+#_210bb6a85af43f806a67007e37e1d3d2 | p@chrX:71299684..71299699, + |
| 5.04e-127 | FFCP PHASE1:Hg19::chrX:71299684..71299699,+#_210bb6a85af43f806a67007e37e1d3d2 | p@chrX:71299684..71299699, + |
| 2.83e-122 | FFCP PHASE2:Hg19::chr10:50153703..50153720,+#_8b2cfd83f289f39727c69c4b798c8570 | p7@WDFY4 |
| 2.83e-122 | FFCP PHASE1:Hg19::chr10:50153703..50153720,+#_8b2cfd83f289f39727c69c4b798c8570 | p7@WDFY4 |
| 3.33e-122 | FFCP PHASE2:Hg19::chr7:150329732..150329739,-#_92462ab7d4b0359b568bb64eb859f689 | p8@GIMAP6 |
| 3.33e-122 | FFCP PHASE1:Hg19::chr7:150329732..150329739,-#_92462ab7d4b0359b568bb64eb859f689 | p8@GIMAP6 |
| 7.0e-122 | FFCP PHASE2:Hg19::chr10:129785574..129785580,+#_969b03d90a33539e81db4b54525135bb | p14@PTPRE |
| 7.0e-122 | FFCP PHASE1:Hg19::chr10:129785574..129785580,+#_969b03d90a33539e81db4b54525135bb | p14@PTPRE |
| 1.1e-120 | FFCP PHASE2:Hg19::chr19:41985048..41985050,-#_d5cfbbd6a1bc19ca9f80b86a21f580a7 | p@chr19:41985048..41985050, - |
| 1.1e-120 | FFCP PHASE1:Hg19::chr19:41985048..41985050,-#_d5cfbbd6a1bc19ca9f80b86a21f580a7 | p@chr19:41985048..41985050, - |
| 1.74e-118 | FFCP PHASE2:Hg19::chr16:2220383..2220402,+#_fc7f7926804213d03c2691389ba51718 | p@chr16:2220383..2220402, + |
| 1.74e-118 | FFCP PHASE1:Hg19::chr16:2220383..2220402,+#_fc7f7926804213d03c2691389ba51718 | p@chr16:2220383..2220402, + |
| 1.27e-117 | FFCP PHASE1:Hg19::chr12:105863705..105863718,+#_60e0e26a9d386299339f658bdbbc1dbf | p@chr12:105863705..105863718, + |
| 1.27e-117 | FFCP PHASE2:Hg19::chr12:105863705..105863718,+#_60e0e26a9d386299339f658bdbbc1dbf | p@chr12:105863705..105863718, + |
| 2.26e-117 | FFCP PHASE2:Hg19::chr10:50153735..50153750,+#_fea1226c8bda33472e362780be738cd6 | p6@WDFY4 |
| 2.26e-117 | FFCP PHASE1:Hg19::chr10:50153735..50153750,+#_fea1226c8bda33472e362780be738cd6 | p6@WDFY4 |
| 6.39e-117 | FFCP PHASE1:Hg19::chr5:95920642..95920681,+#_8803a480cb3bdfafeecf65c07dfab652 | p1@ENST00000513158 |
| 6.39e-117 | FFCP PHASE2:Hg19::chr5:95920642..95920681,+#_8803a480cb3bdfafeecf65c07dfab652 | p1@ENST00000513158 |
| 1.02e-116 | FFCP PHASE1:Hg19::chr12:105863636..105863650,+#_3964ae4bce6a4368f8a6140c7f668fea | p@chr12:105863636..105863650, + |
| 1.02e-116 | FFCP PHASE2:Hg19::chr12:105863636..105863650,+#_3964ae4bce6a4368f8a6140c7f668fea | p@chr12:105863636..105863650, + |
| 4.0e-116 | FFCP PHASE1:Hg19::chr12:71031220..71031229,-#_44a5a16f186fc60f69330c1904cc287f | p10@PTPRB |
| 4.0e-116 | FFCP PHASE2:Hg19::chr12:71031220..71031229,-#_44a5a16f186fc60f69330c1904cc287f | p10@PTPRB |
| 1.77e-114 | FFCP PHASE2:Hg19::chr6:78171774..78171792,+#_ee79222b0110dafaaaf2930480741b80 | p@chr6:78171774..78171792, + |
| 1.77e-114 | FFCP PHASE1:Hg19::chr6:78171774..78171792,+#_ee79222b0110dafaaaf2930480741b80 | p@chr6:78171774..78171792, + |
| 1.5e-113 | FFCP PHASE1:Hg19::chr5:34656634..34656645,+#_a5f0c26fcf8fb8a30ef48b2580abafd2 | p15@RAI14 |
| 1.5e-113 | FFCP PHASE2:Hg19::chr5:34656634..34656645,+#_a5f0c26fcf8fb8a30ef48b2580abafd2 | p15@RAI14 |
| 8.52e-113 | FFCP PHASE1:Hg19::chr18:33047157..33047168,-#_ab482fa432d996069436f0561bdb430a | p@chr18:33047157..33047168, - |
| 8.52e-113 | FFCP PHASE2:Hg19::chr18:33047157..33047168,-#_ab482fa432d996069436f0561bdb430a | p@chr18:33047157..33047168, - |
| 5.18e-112 | FFCP PHASE2:Hg19::chr2:225266779..225266786,-#_84f825b8783a06848c9d5cad0878f130 | p4@FAM124B |
| 5.18e-112 | FFCP PHASE1:Hg19::chr2:225266779..225266786,-#_84f825b8783a06848c9d5cad0878f130 | p4@FAM124B |
| 1.31e-111 | FFCP PHASE1:Hg19::chr13:32835894..32835907,+#_268884be3a3cb8902fa782504b0dfdac | p@chr13:32835894..32835907, + |
| 1.31e-111 | FFCP PHASE2:Hg19::chr13:32835894..32835907,+#_268884be3a3cb8902fa782504b0dfdac | p@chr13:32835894..32835907, + |
| 1.71e-111 | FFCP PHASE1:Hg19::chr6:148664333..148664338,-#_67c833001d3e09cefac49eb7c6720102 | p@chr6:148664333..148664338, - |
| 1.71e-111 | FFCP PHASE2:Hg19::chr6:148664333..148664338,-#_67c833001d3e09cefac49eb7c6720102 | p@chr6:148664333..148664338, - |
| 2.44e-111 | FFCP PHASE1:Hg19::chr15:39423060..39423066,+#_3377112082a596ed2f6f297d0b28843a | p@chr15:39423060..39423066, + |
| 2.44e-111 | FFCP PHASE2:Hg19::chr15:39423060..39423066,+#_3377112082a596ed2f6f297d0b28843a | p@chr15:39423060..39423066, + |
| 6.14e-111 | FFCP PHASE2:Hg19::chr18:33047117..33047138,-#_077a3f31085b35ef71288555d2852330 | p@chr18:33047117..33047138, - |
| 6.14e-111 | FFCP PHASE1:Hg19::chr18:33047117..33047138,-#_077a3f31085b35ef71288555d2852330 | p@chr18:33047117..33047138, - |
| 4.2e-107 | FFCP PHASE1:Hg19::chr12:105863654..105863682,+#_5ad9a0e679450cde8101127acb205780 | p@chr12:105863654..105863682, + |
| 4.2e-107 | FFCP PHASE2:Hg19::chr12:105863654..105863682,+#_5ad9a0e679450cde8101127acb205780 | p@chr12:105863654..105863682, + |
| 1.06e-106 | FFCP PHASE1:Hg19::chr13:32835912..32835936,+#_58fc571e55ce5ed198fbbc0e639a8844 | p@chr13:32835912..32835936, + |
| 1.06e-106 | FFCP PHASE2:Hg19::chr13:32835912..32835936,+#_58fc571e55ce5ed198fbbc0e639a8844 | p@chr13:32835912..32835936, + |
| 4.13e-106 | FFCP PHASE1:Hg19::chr12:80084018..80084035,-#_7f0e49d6fe032daf89fa483b256e3486 | p17@PAWR |
| 4.13e-106 | FFCP PHASE2:Hg19::chr12:80084018..80084035,-#_7f0e49d6fe032daf89fa483b256e3486 | p17@PAWR |
| 4.57e-106 | FFCP PHASE2:Hg19::chr12:96830523..96830532,+#_4f1652539e074aac6067d3d0638a33f8 | p@chr12:96830523..96830532, + |
| 4.57e-106 | FFCP PHASE1:Hg19::chr12:96830523..96830532,+#_4f1652539e074aac6067d3d0638a33f8 | p@chr12:96830523..96830532, + |
| 7.72e-104 | FFCP PHASE2:Hg19::chr6:132455180..132455197,+#_59d121f90faded2e639a58c41072d77e | p2@LOC100507254 |
| 7.72e-104 | FFCP PHASE1:Hg19::chr6:132455180..132455197,+#_59d121f90faded2e639a58c41072d77e | p2@LOC100507254 |
| 1.54e-103 | FFCP PHASE2:Hg19::chrX:107068687..107068703,+#_cbc8a99eb0332327d148f5e92f50cccb | p6@MID2 |
| 1.54e-103 | FFCP PHASE1:Hg19::chrX:107068687..107068703,+#_cbc8a99eb0332327d148f5e92f50cccb | p6@MID2 |
| 7.27e-103 | FFCP PHASE2:Hg19::chr6:78171746..78171769,+#_48b6399cfc66bd4634bdafb3449ac70b | p@chr6:78171746..78171769, + |
| 7.27e-103 | FFCP PHASE1:Hg19::chr6:78171746..78171769,+#_48b6399cfc66bd4634bdafb3449ac70b | p@chr6:78171746..78171769, + |
| 2.59e-102 | FFCP PHASE1:Hg19::chr12:71031247..71031262,-#_f6d79f7952c0c770811fc679bc5bf63b | p7@PTPRB |
| 2.59e-102 | FFCP PHASE2:Hg19::chr12:71031247..71031262,-#_f6d79f7952c0c770811fc679bc5bf63b | p7@PTPRB |
| 2.89e-101 | FFCP PHASE2:Hg19::chr4:5035083..5035101,-#_48e38a6a872410b35b06f7355b15348b | p@chr4:5035083..5035101, - |
| 2.89e-101 | FFCP PHASE1:Hg19::chr4:5035083..5035101,-#_48e38a6a872410b35b06f7355b15348b | p@chr4:5035083..5035101, - |
| 9.14e-101 | FFCP PHASE1:Hg19::chr11:57543275..57543296,+#_d66a5fea2f7f117efd2bcb63f7925cd3 | p@chr11:57543275..57543296, + |
| 9.14e-101 | FFCP PHASE2:Hg19::chr11:57543275..57543296,+#_d66a5fea2f7f117efd2bcb63f7925cd3 | p@chr11:57543275..57543296, + |
| 1.61e-100 | FFCP PHASE1:Hg19::chr14:38725228..38725236,-#_7ecb3a286b4b0d1671b722400c8dcd92 | p5@CLEC14A |
| 1.61e-100 | FFCP PHASE2:Hg19::chr14:38725228..38725236,-#_7ecb3a286b4b0d1671b722400c8dcd92 | p5@CLEC14A |
| 3.71e-100 | FFCP PHASE2:Hg19::chr6:132455157..132455176,+#_47a52a23addb7e1cf5b5ebf87828fcd9 | p1@LOC100507254 |
| 3.71e-100 | FFCP PHASE1:Hg19::chr6:132455157..132455176,+#_47a52a23addb7e1cf5b5ebf87828fcd9 | p1@LOC100507254 |
| 2.24e-99 | FFCP PHASE2:Hg19::chr14:75469820..75469826,+#_bbc7d11dbb9747c6974527b568726a41 | p4@EIF2B2 |
| 2.24e-99 | FFCP PHASE1:Hg19::chr14:75469820..75469826,+#_bbc7d11dbb9747c6974527b568726a41 | p4@EIF2B2 |
| 2.39e-99 | FFCP PHASE1:Hg19::chr7:139741594..139741615,-#_880be9c6b04bb3d95d3faf0227a8967b | p5@PARP12 |
| 2.39e-99 | FFCP PHASE2:Hg19::chr7:139741594..139741615,-#_880be9c6b04bb3d95d3faf0227a8967b | p5@PARP12 |
| 5.71e-99 | FFCP PHASE2:Hg19::chr3:58034268..58034295,+#_aa88801d48ee2c763916556314df86d2 | p@chr3:58034268..58034295, + |
| 5.71e-99 | FFCP PHASE1:Hg19::chr3:58034268..58034295,+#_aa88801d48ee2c763916556314df86d2 | p@chr3:58034268..58034295, + |
| 6.74e-99 | FFCP PHASE1:Hg19::chr13:32838839..32838850,+#_c00438c9c8cc7372ca4ddc0bd055c01c | p20@FRY |
| 6.74e-99 | FFCP PHASE2:Hg19::chr13:32838839..32838850,+#_c00438c9c8cc7372ca4ddc0bd055c01c | p20@FRY |
| 2.02e-98 | FFCP PHASE1:Hg19::chr12:12491541..12491552,-#_ec00d5f9bacdd312292a50bc4dc8d378 | p11@MANSC1 |
| 2.02e-98 | FFCP PHASE2:Hg19::chr12:12491541..12491552,-#_ec00d5f9bacdd312292a50bc4dc8d378 | p11@MANSC1 |
| 1.09e-97 | FFCP PHASE1:Hg19::chr14:38725249..38725254,-#_26de4ae5b18daaec5e338b95d009d4f5 | p6@CLEC14A |
| 1.09e-97 | FFCP PHASE2:Hg19::chr14:38725249..38725254,-#_26de4ae5b18daaec5e338b95d009d4f5 | p6@CLEC14A |
| 2.04e-97 | FFCP PHASE2:Hg19::chr3:43538305..43538325,-#_554fb4a60089092656bf2f3880c7d07e | p@chr3:43538305..43538325, - |
| 2.04e-97 | FFCP PHASE1:Hg19::chr3:43538305..43538325,-#_554fb4a60089092656bf2f3880c7d07e | p@chr3:43538305..43538325, - |
| 2.53e-97 | FFCP PHASE2:Hg19::chr5:71853090..71853107,+#_981d31f9eaea61d33c1ede0aea876d75 | p@chr5:71853090..71853107, + |
| 2.53e-97 | FFCP PHASE1:Hg19::chr5:71853090..71853107,+#_981d31f9eaea61d33c1ede0aea876d75 | p@chr5:71853090..71853107, + |
| 6.25e-97 | FFCP PHASE2:Hg19::chr15:39542867..39542890,+#_9662a362cdb123f9da5eece0dd56ea94 | p1@C15orf54 |
| 6.25e-97 | FFCP PHASE1:Hg19::chr15:39542867..39542890,+#_9662a362cdb123f9da5eece0dd56ea94 | p1@C15orf54 |
| 1.49e-96 | FFCP PHASE2:Hg19::chr17:75137460..75137485,+#_b41aafb9acf983df2cf90ebf1d29e3e0 | p@chr17:75137460..75137485, + |
| 1.49e-96 | FFCP PHASE1:Hg19::chr17:75137460..75137485,+#_b41aafb9acf983df2cf90ebf1d29e3e0 | p@chr17:75137460..75137485, + |
