CL:0002604: Difference between revisions
From FANTOM5_SSTAR
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|located_in= | |located_in= | ||
|name=astrocyte of the hippocampus | |name=astrocyte of the hippocampus | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date=2011-03-06T06:57:33Z | |obo_creation_date=2011-03-06T06:57:33Z | ||
|part_of=UBERON:0001954 | |part_of=UBERON:0001954 | ||
Latest revision as of 16:45, 12 September 2014
| Name: | astrocyte of the hippocampus |
|---|---|
| Namespace: | FANTOM |
| Created by: | tmeehan |
| Creation date: | 2011-03-06T06:57:33Z |
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | CL:0012000(astrocyte of the forebrain),CL:1001580(hippocampus glial cell) |
|---|---|
| part_of: | UBERON:0001954(Ammon's horn) |
Children
| is a: | FF:0000193 (astrocyte of the hippocampus) |
|---|---|
| derives from: | FF:0000197 (mouse astrocyte of hippocampus sample) |
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 11551-120C3 (Mouse Astrocytes - hippocampus, donor2)
- 11632-122C3 (Mouse Astrocytes - hippocampus, donor3)
- 11709-123B8 (Mouse Astrocytes - hippocampus, donor1)
Mouse (Mus musculus)
- 11551-120C3 (Mouse Astrocytes - hippocampus, donor2)
- 11632-122C3 (Mouse Astrocytes - hippocampus, donor3)
- 11709-123B8 (Mouse Astrocytes - hippocampus, donor1)
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002604 (astrocyte of the hippocampus), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 1.87e-86 | FFCP PHASE2:Mm9::chr9:122478206..122478208,+#_2425ec808db122db2f1593a7a9f98d55 | p@chr9:122478206..122478208, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr1:72827387..72827393,-#_2425ec808db122db2f1593a7a9f98d55 | p@chr1:72827387..72827393, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr1:72827387..72827393,-#_2425ec808db122db2f1593a7a9f98d55 | p@chr1:72827387..72827393, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr9:122478206..122478208,+#_2425ec808db122db2f1593a7a9f98d55 | p@chr9:122478206..122478208, + |
| 1.68e-58 | FFCP PHASE2:Mm9::chr1:169619239..169619257,+#_f7401bff6ddbd704915df9cdcaf5886a | p4@Lmx1a |
| 1.68e-58 | FFCP PHASE2:Mm9::chr6:84135739..84135768,+#_f7401bff6ddbd704915df9cdcaf5886a | p@chr6:84135739..84135768, + |
| 1.68e-58 | FFCP PHASE1:Mm9::chr6:84135739..84135768,+#_f7401bff6ddbd704915df9cdcaf5886a | p@chr6:84135739..84135768, + |
| 1.68e-58 | FFCP PHASE2:Mm9::chr14:70592586..70592593,-#_f7401bff6ddbd704915df9cdcaf5886a | p@chr14:70592586..70592593, - |
| 1.68e-58 | FFCP PHASE1:Mm9::chr14:70592586..70592593,-#_f7401bff6ddbd704915df9cdcaf5886a | p@chr14:70592586..70592593, - |
| 1.68e-58 | FFCP PHASE1:Mm9::chr16:15895817..15895825,-#_f7401bff6ddbd704915df9cdcaf5886a | p@chr16:15895817..15895825, - |
| 1.68e-58 | FFCP PHASE1:Mm9::chr1:135936902..135936908,+#_f7401bff6ddbd704915df9cdcaf5886a | p@chr1:135936902..135936908, + |
| 1.68e-58 | FFCP PHASE2:Mm9::chr12:86222392..86222395,-#_f7401bff6ddbd704915df9cdcaf5886a | p@chr12:86222392..86222395, - |
| 1.68e-58 | FFCP PHASE1:Mm9::chr12:86222392..86222395,-#_f7401bff6ddbd704915df9cdcaf5886a | p@chr12:86222392..86222395, - |
| 1.68e-58 | FFCP PHASE1:Mm9::chr11:66340488..66340520,-#_f7401bff6ddbd704915df9cdcaf5886a | p@chr11:66340488..66340520, - |
| 1.68e-58 | FFCP PHASE1:Mm9::chr1:169619239..169619257,+#_f7401bff6ddbd704915df9cdcaf5886a | p4@Lmx1a |
| 1.68e-58 | FFCP PHASE2:Mm9::chr16:15895817..15895825,-#_f7401bff6ddbd704915df9cdcaf5886a | p@chr16:15895817..15895825, - |
| 1.68e-58 | FFCP PHASE2:Mm9::chr1:135936902..135936908,+#_f7401bff6ddbd704915df9cdcaf5886a | p@chr1:135936902..135936908, + |
| 1.68e-58 | FFCP PHASE2:Mm9::chr11:66340488..66340520,-#_f7401bff6ddbd704915df9cdcaf5886a | p@chr11:66340488..66340520, - |
| 1.66e-44 | FFCP PHASE1:Mm9::chr1:135937391..135937415,+#_fd352ddb48125926cd5da7dac47ca0c0 | p@chr1:135937391..135937415, + |
| 1.66e-44 | FFCP PHASE2:Mm9::chr2:38207200..38207210,+#_fd352ddb48125926cd5da7dac47ca0c0 | p13@Lhx2 |
| 1.66e-44 | FFCP PHASE1:Mm9::chr2:38207200..38207210,+#_fd352ddb48125926cd5da7dac47ca0c0 | p13@Lhx2 |
| 1.66e-44 | FFCP PHASE1:Mm9::chr9:43915826..43915844,+#_fd352ddb48125926cd5da7dac47ca0c0 | p@chr9:43915826..43915844, + |
| 1.66e-44 | FFCP PHASE2:Mm9::chr7:149885426..149885434,-#_fd352ddb48125926cd5da7dac47ca0c0 | p2@Ins2 |
| 1.66e-44 | FFCP PHASE1:Mm9::chr7:149885426..149885434,-#_fd352ddb48125926cd5da7dac47ca0c0 | p2@Ins2 |
| 1.66e-44 | FFCP PHASE2:Mm9::chr1:135937391..135937415,+#_fd352ddb48125926cd5da7dac47ca0c0 | p@chr1:135937391..135937415, + |
| 1.66e-44 | FFCP PHASE2:Mm9::chr9:43915826..43915844,+#_fd352ddb48125926cd5da7dac47ca0c0 | p@chr9:43915826..43915844, + |
| 2.75e-44 | FFCP PHASE1:Mm9::chr1:135808073..135808085,-#_77768e38ce7f686e2cae69934f341065 | p@chr1:135808073..135808085, - |
| 2.75e-44 | FFCP PHASE2:Mm9::chr17:26758457..26758466,+#_77768e38ce7f686e2cae69934f341065 | p10@Ergic1 |
| 2.75e-44 | FFCP PHASE1:Mm9::chr17:26758457..26758466,+#_77768e38ce7f686e2cae69934f341065 | p10@Ergic1 |
| 2.75e-44 | FFCP PHASE2:Mm9::chr1:135808073..135808085,-#_77768e38ce7f686e2cae69934f341065 | p@chr1:135808073..135808085, - |
| 4.52e-44 | FFCP PHASE2:Mm9::chr16:15957833..15957836,-#_e3cce2a862661277191670f92449f124 | p@chr16:15957833..15957836, - |
| 4.52e-44 | FFCP PHASE1:Mm9::chr16:15957833..15957836,-#_e3cce2a862661277191670f92449f124 | p@chr16:15957833..15957836, - |
| 4.52e-44 | FFCP PHASE2:Mm9::chr14:70591272..70591278,-#_e3cce2a862661277191670f92449f124 | p@chr14:70591272..70591278, - |
| 4.52e-44 | FFCP PHASE1:Mm9::chr14:70591272..70591278,-#_e3cce2a862661277191670f92449f124 | p@chr14:70591272..70591278, - |
| 4.55e-44 | FFCP PHASE2:Mm9::chr18:69681228..69681237,+#_01b6a6247be9482cd555adf0b0a54344 | p44@Tcf4 |
| 4.55e-44 | FFCP PHASE2:Mm9::chr8:28089083..28089090,+#_01b6a6247be9482cd555adf0b0a54344 | p@chr8:28089083..28089090, + |
| 4.55e-44 | FFCP PHASE1:Mm9::chr18:69681228..69681237,+#_01b6a6247be9482cd555adf0b0a54344 | p44@Tcf4 |
| 4.55e-44 | FFCP PHASE1:Mm9::chr8:28089083..28089090,+#_01b6a6247be9482cd555adf0b0a54344 | p@chr8:28089083..28089090, + |
| 7.52e-44 | FFCP PHASE1:Mm9::chr6:92777773..92777784,+#_f528f7d31442bf966858de51a4b134ec | p4@ENSMUST00000133858 |
| 7.52e-44 | FFCP PHASE2:Mm9::chr6:92777773..92777784,+#_f528f7d31442bf966858de51a4b134ec | p4@ENSMUST00000133858 |
| 1.24e-43 | FFCP PHASE2:Mm9::chr15:88808274..88808289,-#_5a7ba58a8c885690315b59acdca666bf | p@chr15:88808274..88808289, - |
| 1.24e-43 | FFCP PHASE1:Mm9::chr15:88808274..88808289,-#_5a7ba58a8c885690315b59acdca666bf | p@chr15:88808274..88808289, - |
| 4.23e-36 | FFCP PHASE1:Mm9::chr1:135811313..135811319,-#_7704a54c83fd557044b54326dd3e9696 | p@chr1:135811313..135811319, - |
| 4.23e-36 | FFCP PHASE1:Mm9::chr16:15895800..15895814,-#_7704a54c83fd557044b54326dd3e9696 | p@chr16:15895800..15895814, - |
| 4.23e-36 | FFCP PHASE2:Mm9::chr1:135811313..135811319,-#_7704a54c83fd557044b54326dd3e9696 | p@chr1:135811313..135811319, - |
| 4.23e-36 | FFCP PHASE2:Mm9::chr1:72895881..72895885,-#_7704a54c83fd557044b54326dd3e9696 | p@chr1:72895881..72895885, - |
| 4.23e-36 | FFCP PHASE1:Mm9::chr11:75244815..75244826,-#_7704a54c83fd557044b54326dd3e9696 | p@chr11:75244815..75244826, - |
| 4.23e-36 | FFCP PHASE2:Mm9::chr11:75244815..75244826,-#_7704a54c83fd557044b54326dd3e9696 | p@chr11:75244815..75244826, - |
| 4.23e-36 | FFCP PHASE2:Mm9::chr16:15895800..15895814,-#_7704a54c83fd557044b54326dd3e9696 | p@chr16:15895800..15895814, - |
| 4.23e-36 | FFCP PHASE1:Mm9::chr1:135811991..135811998,-#_7704a54c83fd557044b54326dd3e9696 | p@chr1:135811991..135811998, - |
| 4.23e-36 | FFCP PHASE1:Mm9::chr8:73022520..73022524,+#_7704a54c83fd557044b54326dd3e9696 | p@chr8:73022520..73022524, + |
| 4.23e-36 | FFCP PHASE1:Mm9::chr1:72895881..72895885,-#_7704a54c83fd557044b54326dd3e9696 | p@chr1:72895881..72895885, - |
| 4.23e-36 | FFCP PHASE2:Mm9::chr1:135811991..135811998,-#_7704a54c83fd557044b54326dd3e9696 | p@chr1:135811991..135811998, - |
| 4.23e-36 | FFCP PHASE2:Mm9::chr8:73022520..73022524,+#_7704a54c83fd557044b54326dd3e9696 | p@chr8:73022520..73022524, + |
| 6.35e-36 | FFCP PHASE2:Mm9::chr1:72873148..72873157,+#_0fdc2c9e68a5bcff127fc5c7d4cc76ee | p@chr1:72873148..72873157, + |
| 6.35e-36 | FFCP PHASE1:Mm9::chr1:72873148..72873157,+#_0fdc2c9e68a5bcff127fc5c7d4cc76ee | p@chr1:72873148..72873157, + |
| 1.42e-35 | FFCP PHASE2:Mm9::chr3:88990698..88990709,+#_383a0d22fa918634dedc9a807fe0124d | p@chr3:88990698..88990709, + |
| 1.42e-35 | FFCP PHASE1:Mm9::chr3:88990698..88990709,+#_383a0d22fa918634dedc9a807fe0124d | p@chr3:88990698..88990709, + |
| 2.13e-35 | FFCP PHASE2:Mm9::chr11:102749254..102749263,-#_aac5b12fac82a7dc85e59eb3664ac06f | p@chr11:102749254..102749263, - |
| 2.13e-35 | FFCP PHASE1:Mm9::chr11:102749254..102749263,-#_aac5b12fac82a7dc85e59eb3664ac06f | p@chr11:102749254..102749263, - |
| 2.13e-35 | FFCP PHASE2:Mm9::chr10:85809948..85809959,+#_aac5b12fac82a7dc85e59eb3664ac06f | p@chr10:85809948..85809959, + |
| 2.13e-35 | FFCP PHASE1:Mm9::chr10:85809948..85809959,+#_aac5b12fac82a7dc85e59eb3664ac06f | p@chr10:85809948..85809959, + |
| 3.18e-35 | FFCP PHASE1:Mm9::chr19:40457627..40457636,-#_d90470887c202652b1335f50bae32f33 | p9@Sorbs1 |
| 3.18e-35 | FFCP PHASE2:Mm9::chr19:40457627..40457636,-#_d90470887c202652b1335f50bae32f33 | p9@Sorbs1 |
| 4.75e-35 | FFCP PHASE1:Mm9::chr14:122775017..122775037,+#_ad1ad0b41a20c96ba1cd0c95ef21b11f | p@chr14:122775017..122775037, + |
| 4.75e-35 | FFCP PHASE2:Mm9::chr14:122775017..122775037,+#_ad1ad0b41a20c96ba1cd0c95ef21b11f | p@chr14:122775017..122775037, + |
| 1.73e-30 | FFCP PHASE2:Mm9::chr1:135937446..135937472,+#_05cfb60397221158df62e3f712ec865f | p@chr1:135937446..135937472, + |
| 1.73e-30 | FFCP PHASE1:Mm9::chr1:72898728..72898736,+#_05cfb60397221158df62e3f712ec865f | p@chr1:72898728..72898736, + |
| 1.73e-30 | FFCP PHASE2:Mm9::chr1:72895689..72895698,-#_05cfb60397221158df62e3f712ec865f | p@chr1:72895689..72895698, - |
| 1.73e-30 | FFCP PHASE2:Mm9::chr1:135936977..135936983,+#_05cfb60397221158df62e3f712ec865f | p@chr1:135936977..135936983, + |
| 1.73e-30 | FFCP PHASE1:Mm9::chr1:135811496..135811501,-#_05cfb60397221158df62e3f712ec865f | p@chr1:135811496..135811501, - |
| 1.73e-30 | FFCP PHASE1:Mm9::chr1:135936966..135936975,-#_05cfb60397221158df62e3f712ec865f | p@chr1:135936966..135936975, - |
| 1.73e-30 | FFCP PHASE1:Mm9::chr1:72895689..72895698,-#_05cfb60397221158df62e3f712ec865f | p@chr1:72895689..72895698, - |
| 1.73e-30 | FFCP PHASE1:Mm9::chr1:135937446..135937472,+#_05cfb60397221158df62e3f712ec865f | p@chr1:135937446..135937472, + |
| 1.73e-30 | FFCP PHASE1:Mm9::chr1:135936977..135936983,+#_05cfb60397221158df62e3f712ec865f | p@chr1:135936977..135936983, + |
| 1.73e-30 | FFCP PHASE2:Mm9::chr1:135811496..135811501,-#_05cfb60397221158df62e3f712ec865f | p@chr1:135811496..135811501, - |
| 1.73e-30 | FFCP PHASE2:Mm9::chr1:135936966..135936975,-#_05cfb60397221158df62e3f712ec865f | p@chr1:135936966..135936975, - |
| 1.73e-30 | FFCP PHASE2:Mm9::chr1:72898813..72898818,+#_05cfb60397221158df62e3f712ec865f | p@chr1:72898813..72898818, + |
| 1.73e-30 | FFCP PHASE2:Mm9::chr14:70592673..70592699,-#_05cfb60397221158df62e3f712ec865f | p@chr14:70592673..70592699, - |
| 1.73e-30 | FFCP PHASE1:Mm9::chr14:70592673..70592699,-#_05cfb60397221158df62e3f712ec865f | p@chr14:70592673..70592699, - |
| 1.73e-30 | FFCP PHASE2:Mm9::chr1:72898728..72898736,+#_05cfb60397221158df62e3f712ec865f | p@chr1:72898728..72898736, + |
| 1.73e-30 | FFCP PHASE1:Mm9::chr1:72898813..72898818,+#_05cfb60397221158df62e3f712ec865f | p@chr1:72898813..72898818, + |
| 2.43e-30 | FFCP PHASE1:Mm9::chr11:102754448..102754459,-#_beaa2440457d24f0e9808ef87f85769c | p@chr11:102754448..102754459, - |
| 2.43e-30 | FFCP PHASE2:Mm9::chr1:72898995..72899006,+#_beaa2440457d24f0e9808ef87f85769c | p@chr1:72898995..72899006, + |
| 2.43e-30 | FFCP PHASE1:Mm9::chr1:72898995..72899006,+#_beaa2440457d24f0e9808ef87f85769c | p@chr1:72898995..72899006, + |
| 2.43e-30 | FFCP PHASE2:Mm9::chr1:72895653..72895660,+#_beaa2440457d24f0e9808ef87f85769c | p9@Igfbp2 |
| 2.43e-30 | FFCP PHASE1:Mm9::chr19:25684746..25684751,+#_beaa2440457d24f0e9808ef87f85769c | p2@Dmrt3 |
| 2.43e-30 | FFCP PHASE2:Mm9::chr19:25684746..25684751,+#_beaa2440457d24f0e9808ef87f85769c | p2@Dmrt3 |
| 2.43e-30 | FFCP PHASE2:Mm9::chr11:102754448..102754459,-#_beaa2440457d24f0e9808ef87f85769c | p@chr11:102754448..102754459, - |
| 2.43e-30 | FFCP PHASE1:Mm9::chr1:72895653..72895660,+#_beaa2440457d24f0e9808ef87f85769c | p9@Igfbp2 |
| 3.41e-30 | FFCP PHASE2:Mm9::chr1:72898643..72898650,+#_8be087ee2edfe44aa7f11de9a86856b0 | p@chr1:72898643..72898650, + |
| 3.41e-30 | FFCP PHASE1:Mm9::chr4:153975408..153975411,+#_8be087ee2edfe44aa7f11de9a86856b0 | p1@ENSMUST00000132106 |
| 3.41e-30 | FFCP PHASE1:Mm9::chr1:72898643..72898650,+#_8be087ee2edfe44aa7f11de9a86856b0 | p@chr1:72898643..72898650, + |
| 3.41e-30 | FFCP PHASE2:Mm9::chr4:153975408..153975411,+#_8be087ee2edfe44aa7f11de9a86856b0 | p1@ENSMUST00000132106 |
| 4.77e-30 | FFCP PHASE2:Mm9::chr1:174128464..174128474,-#_f240c3fa1ec670772fb7a56359106a60 | p@chr1:174128464..174128474, - |
| 4.77e-30 | FFCP PHASE1:Mm9::chr1:174128464..174128474,-#_f240c3fa1ec670772fb7a56359106a60 | p@chr1:174128464..174128474, - |
| 6.69e-30 | FFCP PHASE2:Mm9::chr11:7113417..7113424,-#_be5303902f891c1fb1fdcdc787a5ba86 | p@chr11:7113417..7113424, - |
| 6.69e-30 | FFCP PHASE1:Mm9::chr11:7113417..7113424,-#_be5303902f891c1fb1fdcdc787a5ba86 | p@chr11:7113417..7113424, - |
| 1.31e-29 | FFCP PHASE1:Mm9::chr2:119000878..119000908,-#_660bf134aaba01141d88155a41db0f65 | p@chr2:119000878..119000908, - |
| 1.31e-29 | FFCP PHASE1:Mm9::chr14:13179159..13179165,-#_660bf134aaba01141d88155a41db0f65 | p@chr14:13179159..13179165, - |
