UBERON:0003133: Difference between revisions
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|located_in= | |located_in= | ||
|name=reproductive organ | |name=reproductive organ | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date= | |obo_creation_date= | ||
|part_of=UBERON:0000990 | |part_of=UBERON:0000990 |
Latest revision as of 17:38, 12 September 2014
Name: | reproductive organ | ||
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Namespace: | FANTOM | ||
Definition: | "An organ involved in reproduction" [UBERON:xp] | ||
Xrefs: |
| ||
Synonyms: |
"genital organ" EXACT [] "genitalia" RELATED PLURAL [] "reproductive system organ" EXACT [] "sex organ" EXACT [] | ||
Comments: | GO uses genitalia for the singular organ | ||
Subset: |
functional_classification organ_slim |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
is_a: | UBERON:0000062(organ),UBERON:0005156(reproductive structure) |
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part_of: | UBERON:0000990(reproductive system) |
Children
is a: | UBERON:0000991 (gonad),UBERON:0003134 (female reproductive organ),UBERON:0003135 (male reproductive organ),UBERON:0004175 (internal genitalia),UBERON:0004176 (external genitalia) |
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Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10013-101C4 (cervix, adult, pool1)
- 10020-101D2 (ovary, adult, pool1)
- 10026-101D8 (testis, adult, pool1)
- 10096-102C6 (testis, adult, pool2)
- 10100-102D1 (uterus, adult, pool1)
- 10196-103E7 (ductus deferens, adult)
- 10197-103E8 (epididymis, adult)
- 10200-103F2 (penis, adult)
- 10201-103F3 (seminal vesicle, adult)
- 10204-103F6 (vagina, adult)
... further results Mouse (Mus musculus)
- 10013-101C4 (cervix, adult, pool1)
- 10020-101D2 (ovary, adult, pool1)
- 10026-101D8 (testis, adult, pool1)
- 10096-102C6 (testis, adult, pool2)
- 10100-102D1 (uterus, adult, pool1)
- 10196-103E7 (ductus deferens, adult)
- 10197-103E8 (epididymis, adult)
- 10200-103F2 (penis, adult)
- 10201-103F3 (seminal vesicle, adult)
- 10204-103F6 (vagina, adult)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0003133 (reproductive organ), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
P-value | FFCP | Short description |
---|---|---|
9.61e-55 | FFCP PHASE1:Mm9::chr4:143998300..143998343,-#_52bca3e9131b2e30e63bf7ce09daea1c | p1@Pramef12 |
9.61e-55 | FFCP PHASE2:Mm9::chr4:143998300..143998343,-#_52bca3e9131b2e30e63bf7ce09daea1c | p1@Pramef12 |
1.58e-51 | FFCP PHASE2:Mm9::chr5:31271028..31271040,+#_5622c3e5d250fa801b1d4f99d725dc25 | p1@Tcf23 |
1.58e-51 | FFCP PHASE1:Mm9::chr5:31271028..31271040,+#_5622c3e5d250fa801b1d4f99d725dc25 | p1@Tcf23 |
3.71e-50 | FFCP PHASE1:Mm9::chr6:18059063..18059084,-#_47e6c01cc8d755b527e2b6f01b5ca706 | p2@Asz1 |
3.71e-50 | FFCP PHASE2:Mm9::chr6:18059063..18059084,-#_47e6c01cc8d755b527e2b6f01b5ca706 | p2@Asz1 |
1.83e-48 | FFCP PHASE2:Mm9::chr1:168168856..168168893,-#_ad45e45853e4af855a30411b5a84a2b1 | p1@Mael |
1.83e-48 | FFCP PHASE1:Mm9::chr1:168168856..168168893,-#_ad45e45853e4af855a30411b5a84a2b1 | p1@Mael |
1.7e-47 | FFCP PHASE2:Mm9::chr7:52741629..52741644,+#_a56abae6b8cf930758fbf39969268821 | p7@Tulp2 |
1.7e-47 | FFCP PHASE1:Mm9::chr7:52741629..52741644,+#_a56abae6b8cf930758fbf39969268821 | p7@Tulp2 |
2.69e-47 | FFCP PHASE1:Mm9::chr14:70829178..70829221,-#_a4700c173fd9de08ea42e2172f72b2b7 | p1@Piwil2 |
2.69e-47 | FFCP PHASE2:Mm9::chr14:70829178..70829221,-#_a4700c173fd9de08ea42e2172f72b2b7 | p1@Piwil2 |
1.02e-46 | FFCP PHASE1:Mm9::chr2:148615085..148615142,+#_39535b8cf5af7bf689f4f945d81e9b62 | p1@Cst12 |
1.02e-46 | FFCP PHASE2:Mm9::chr2:148615085..148615142,+#_39535b8cf5af7bf689f4f945d81e9b62 | p1@Cst12 |
1.26e-46 | FFCP PHASE2:Mm9::chr3:54985946..54985981,+#_ce5738d90deb2d560b1422edabd73042 | p1@Sohlh2 |
1.26e-46 | FFCP PHASE2:Mm9::chr3:40512838..40512859,+#_ce5738d90deb2d560b1422edabd73042 | p2@Slc25a31 |
1.26e-46 | FFCP PHASE1:Mm9::chr3:40512838..40512859,+#_ce5738d90deb2d560b1422edabd73042 | p2@Slc25a31 |
1.26e-46 | FFCP PHASE1:Mm9::chr3:54985946..54985981,+#_ce5738d90deb2d560b1422edabd73042 | p1@Sohlh2 |
1.48e-46 | FFCP PHASE2:Mm9::chr6:18059038..18059062,-#_7f5914c3d1e87b787829d56b1523b75f | p1@Asz1 |
1.48e-46 | FFCP PHASE1:Mm9::chr6:18059038..18059062,-#_7f5914c3d1e87b787829d56b1523b75f | p1@Asz1 |
1.51e-46 | FFCP PHASE1:Mm9::chr12:31775417..31775434,-#_fe86b019e45d31ca934eceffc5641ddf | p@chr12:31775417..31775434, - |
1.51e-46 | FFCP PHASE2:Mm9::chr12:31775417..31775434,-#_fe86b019e45d31ca934eceffc5641ddf | p@chr12:31775417..31775434, - |
7.47e-46 | FFCP PHASE1:Mm9::chr7:109015811..109015852,-#_122d7683f37f85f046d2e7ac098d0a4d | p6@Folr1 |
7.47e-46 | FFCP PHASE2:Mm9::chr7:109015811..109015852,-#_122d7683f37f85f046d2e7ac098d0a4d | p6@Folr1 |
4.24e-45 | FFCP PHASE1:Mm9::chr17:50432917..50432931,-#_081de5891445140d16514200cb6626c0 | p1@Dazl |
4.24e-45 | FFCP PHASE2:Mm9::chr17:50432917..50432931,-#_081de5891445140d16514200cb6626c0 | p1@Dazl |
8.73e-45 | FFCP PHASE1:Mm9::chr3:107746281..107746297,-#_74bae5968331c6b3d4eebd5d8d370641 | p5@Gstm6 |
8.73e-45 | FFCP PHASE2:Mm9::chr3:107746281..107746297,-#_74bae5968331c6b3d4eebd5d8d370641 | p5@Gstm6 |
1.45e-44 | FFCP PHASE1:Mm9::chr15:88813324..88813392,+#_c308f5dcdfca7a540fea387da50f3471 | p1@Mov10l1 |
1.45e-44 | FFCP PHASE2:Mm9::chr15:88813324..88813392,+#_c308f5dcdfca7a540fea387da50f3471 | p1@Mov10l1 |
3.69e-44 | FFCP PHASE1:Mm9::chr3:102740016..102740030,-#_3f9d13c6986f4ea042d51fb62806bcc6 | p1@Sycp1 |
3.69e-44 | FFCP PHASE2:Mm9::chr3:102740016..102740030,-#_3f9d13c6986f4ea042d51fb62806bcc6 | p1@Sycp1 |
6.62e-44 | FFCP PHASE1:Mm9::chr6:49345558..49345593,+#_507f1b1f24c9690eeaf665b1310ec0bf | p2@Stk31 |
6.62e-44 | FFCP PHASE2:Mm9::chr6:49345558..49345593,+#_507f1b1f24c9690eeaf665b1310ec0bf | p2@Stk31 |
8.13e-44 | FFCP PHASE1:Mm9::chrX:98989738..98989756,-#_eeac46cce40d112dce4e484f53ecabbb | p@chrX:98989738..98989756, - |
8.13e-44 | FFCP PHASE2:Mm9::chrX:98989738..98989756,-#_eeac46cce40d112dce4e484f53ecabbb | p@chrX:98989738..98989756, - |
1.74e-43 | FFCP PHASE1:Mm9::chrX:135868376..135868409,+#_20a5795a38306d03f8b3f67f532338d3 | p1@Trap1a |
1.74e-43 | FFCP PHASE2:Mm9::chrX:135868376..135868409,+#_20a5795a38306d03f8b3f67f532338d3 | p1@Trap1a |
1.91e-43 | FFCP PHASE1:Mm9::chrX:35232004..35232025,-#_872ec09bba8dcc32097eaa63221410ff | p@chrX:35232004..35232025, - |
1.91e-43 | FFCP PHASE2:Mm9::chrX:35232004..35232025,-#_872ec09bba8dcc32097eaa63221410ff | p@chrX:35232004..35232025, - |
2.98e-43 | FFCP PHASE2:Mm9::chr15:102277099..102277126,+#_0234a4683ddd9905b409fb29c0cadeef | p@chr15:102277099..102277126, + |
2.98e-43 | FFCP PHASE1:Mm9::chr15:102277099..102277126,+#_0234a4683ddd9905b409fb29c0cadeef | p@chr15:102277099..102277126, + |
4.11e-43 | FFCP PHASE2:Mm9::chr11:100939677..100939722,+#_83f4f22bada4433171474114e208e58e | p1@Hsd17b1 |
4.11e-43 | FFCP PHASE1:Mm9::chr11:100939677..100939722,+#_83f4f22bada4433171474114e208e58e | p1@Hsd17b1 |
5.11e-43 | FFCP PHASE1:Mm9::chr4:62295167..62295182,+#_e9c209be035df2108fad60727b020da4 | p22@Rgs3 |
5.11e-43 | FFCP PHASE1:Mm9::chr2:148660852..148660861,+#_e9c209be035df2108fad60727b020da4 | p3@Cst9 |
5.11e-43 | FFCP PHASE2:Mm9::chr2:148660852..148660861,+#_e9c209be035df2108fad60727b020da4 | p3@Cst9 |
5.11e-43 | FFCP PHASE2:Mm9::chr4:62295167..62295182,+#_e9c209be035df2108fad60727b020da4 | p22@Rgs3 |
1.44e-42 | FFCP PHASE1:Mm9::chr5:135825867..135825910,-#_7d369a23d72764d2d6ba9c8171e5be59 | p1@Fkbp6 |
1.44e-42 | FFCP PHASE2:Mm9::chr5:135825867..135825910,-#_7d369a23d72764d2d6ba9c8171e5be59 | p1@Fkbp6 |
1.44e-42 | FFCP PHASE1:Mm9::chr7:149469129..149469146,+#_7d369a23d72764d2d6ba9c8171e5be59 | p@chr7:149469129..149469146, + |
1.44e-42 | FFCP PHASE2:Mm9::chr7:149469129..149469146,+#_7d369a23d72764d2d6ba9c8171e5be59 | p@chr7:149469129..149469146, + |
1.65e-42 | FFCP PHASE2:Mm9::chr7:147143936..147143939,-#_a642bff79edf001604c30edd6783a847 | p1@Mir202 |
1.65e-42 | FFCP PHASE1:Mm9::chr7:147143936..147143939,-#_a642bff79edf001604c30edd6783a847 | p1@Mir202 |
2.86e-42 | FFCP PHASE1:Mm9::chr11:87218551..87218615,+#_ce6d60629c73642222cdbb0fa55dd88c | p1@Tex14 |
2.86e-42 | FFCP PHASE2:Mm9::chr11:87218551..87218615,+#_ce6d60629c73642222cdbb0fa55dd88c | p1@Tex14 |
4.03e-42 | FFCP PHASE2:Mm9::chr17:32171438..32171468,-#_30b3c834c5d20ec23a095fb1b35d2837 | p1@Hsf2bp |
4.03e-42 | FFCP PHASE1:Mm9::chr17:32171438..32171468,-#_30b3c834c5d20ec23a095fb1b35d2837 | p1@Hsf2bp |
6.5e-42 | FFCP PHASE2:Mm9::chr3:95363593..95363613,+#_2c5a6c6ae1a76c51eb604bada459ec62 | p1@Hormad1 |
6.5e-42 | FFCP PHASE1:Mm9::chr3:95363593..95363613,+#_2c5a6c6ae1a76c51eb604bada459ec62 | p1@Hormad1 |
6.96e-42 | FFCP PHASE2:Mm9::chr13:24026303..24026308,+#_9fda5fc7f515d27b01287b41086f373d | p1@Hist1h2aa |
6.96e-42 | FFCP PHASE1:Mm9::chr13:24026303..24026308,+#_9fda5fc7f515d27b01287b41086f373d | p1@Hist1h2aa |
3.49e-41 | FFCP PHASE1:Mm9::chr9:50369387..50369406,-#_91ad0a3901e8fd65246391bec813a8ff | p1@Tex12 |
3.49e-41 | FFCP PHASE2:Mm9::chr9:50369387..50369406,-#_91ad0a3901e8fd65246391bec813a8ff | p1@Tex12 |
4.98e-41 | FFCP PHASE2:Mm9::chr18:47081451..47081490,+#_a384cdb901703acb2c75ef94be77235f | p1@Gm949 |
4.98e-41 | FFCP PHASE1:Mm9::chr18:47081451..47081490,+#_a384cdb901703acb2c75ef94be77235f | p1@Gm949 |
7.1e-41 | FFCP PHASE1:Mm9::chr19:40968642..40968653,+#_8da1fdbad49df58f7c951e443030253b | p@chr19:40968642..40968653, + |
7.1e-41 | FFCP PHASE2:Mm9::chr19:40968642..40968653,+#_8da1fdbad49df58f7c951e443030253b | p@chr19:40968642..40968653, + |
1.25e-40 | FFCP PHASE1:Mm9::chr3:107746250..107746266,-#_baf6ef768ec18ed144f8807e21718688 | p4@Gstm6 |
1.25e-40 | FFCP PHASE2:Mm9::chr3:107746250..107746266,-#_baf6ef768ec18ed144f8807e21718688 | p4@Gstm6 |
1.44e-40 | FFCP PHASE2:Mm9::chr1:36739960..36739999,-#_c4f81872c7ed394fc52a4b3ea67d4597 | p1@Fam178b |
1.44e-40 | FFCP PHASE1:Mm9::chr6:145564529..145564546,+#_c4f81872c7ed394fc52a4b3ea67d4597 | p1@Tuba3b |
1.44e-40 | FFCP PHASE2:Mm9::chr6:145564529..145564546,+#_c4f81872c7ed394fc52a4b3ea67d4597 | p1@Tuba3b |
1.44e-40 | FFCP PHASE1:Mm9::chr1:36739960..36739999,-#_c4f81872c7ed394fc52a4b3ea67d4597 | p1@Fam178b |
1.44e-40 | FFCP PHASE1:Mm9::chr6:125236033..125236068,-#_c4f81872c7ed394fc52a4b3ea67d4597 | p1@Tuba3a, p2@Tuba3b |
1.44e-40 | FFCP PHASE2:Mm9::chr6:125236033..125236068,-#_c4f81872c7ed394fc52a4b3ea67d4597 | p1@Tuba3a, p2@Tuba3b |
2.0e-40 | FFCP PHASE2:Mm9::chr7:20074394..20074416,+#_ecc927edb62eb34c02e57e94a7a7d351 | p1@Exoc3l2 |
2.0e-40 | FFCP PHASE1:Mm9::chr7:20074394..20074416,+#_ecc927edb62eb34c02e57e94a7a7d351 | p1@Exoc3l2 |
4.22e-40 | FFCP PHASE1:Mm9::chr7:36322696..36322738,-#_1f0a1917ddacd01c6111d54353a4e4df | p1@Tdrd12 |
4.22e-40 | FFCP PHASE2:Mm9::chr7:36322696..36322738,-#_1f0a1917ddacd01c6111d54353a4e4df | p1@Tdrd12 |
4.55e-40 | FFCP PHASE1:Mm9::chrX:103416484..103416508,-#_4cb7fe795e5f0597b3b968496e5cc9bc | p4@Taf9b |
4.55e-40 | FFCP PHASE2:Mm9::chrX:103416484..103416508,-#_4cb7fe795e5f0597b3b968496e5cc9bc | p4@Taf9b |
9.32e-40 | FFCP PHASE2:Mm9::chr13:64190487..64190500,-#_b641b03369bf3bbada26596c5cc3a4a0 | p3@Hsd17b3 |
9.32e-40 | FFCP PHASE1:Mm9::chr13:64190487..64190500,-#_b641b03369bf3bbada26596c5cc3a4a0 | p3@Hsd17b3 |
9.32e-40 | FFCP PHASE2:Mm9::chr7:20074432..20074443,+#_b641b03369bf3bbada26596c5cc3a4a0 | p2@Exoc3l2 |
9.32e-40 | FFCP PHASE1:Mm9::chr7:20074432..20074443,+#_b641b03369bf3bbada26596c5cc3a4a0 | p2@Exoc3l2 |
1.01e-39 | FFCP PHASE2:Mm9::chrX:50788166..50788192,+#_d7dde87cb5402ba09e5569ce7b212fd3 | p1@Etd |
1.01e-39 | FFCP PHASE1:Mm9::chrX:50788166..50788192,+#_d7dde87cb5402ba09e5569ce7b212fd3 | p1@Etd |
1.09e-39 | FFCP PHASE2:Mm9::chr19:25580272..25580305,+#_f2affcd4b68ea0fcc56e32c0735e3d61 | p3@Dmrt1 |
1.09e-39 | FFCP PHASE1:Mm9::chrX:50788129..50788149,+#_f2affcd4b68ea0fcc56e32c0735e3d61 | p2@Etd |
1.09e-39 | FFCP PHASE1:Mm9::chr19:25580272..25580305,+#_f2affcd4b68ea0fcc56e32c0735e3d61 | p3@Dmrt1 |
1.09e-39 | FFCP PHASE2:Mm9::chrX:50788129..50788149,+#_f2affcd4b68ea0fcc56e32c0735e3d61 | p2@Etd |
1.28e-39 | FFCP PHASE2:Mm9::chrX:71422591..71422607,+#_bc8c98c1af505a31bcc6baed29b598e1 | p1@Tktl1 |
1.28e-39 | FFCP PHASE2:Mm9::chr8:26314330..26314348,-#_bc8c98c1af505a31bcc6baed29b598e1 | p@chr8:26314330..26314348, - |
1.28e-39 | FFCP PHASE1:Mm9::chr8:26314330..26314348,-#_bc8c98c1af505a31bcc6baed29b598e1 | p@chr8:26314330..26314348, - |
1.28e-39 | FFCP PHASE1:Mm9::chrX:71422591..71422607,+#_bc8c98c1af505a31bcc6baed29b598e1 | p1@Tktl1 |
1.39e-39 | FFCP PHASE2:Mm9::chr9:50369425..50369436,-#_2eca3adf5ed85e4863de928d150c5930 | p3@Tex12 |
1.39e-39 | FFCP PHASE1:Mm9::chr9:50369425..50369436,-#_2eca3adf5ed85e4863de928d150c5930 | p3@Tex12 |
1.67e-39 | FFCP PHASE2:Mm9::chrX:93160409..93160432,-#_94506a91cc5203aa7678a30aacdec48f | p@chrX:93160409..93160432, - |
1.67e-39 | FFCP PHASE1:Mm9::chrX:93160409..93160432,-#_94506a91cc5203aa7678a30aacdec48f | p@chrX:93160409..93160432, - |