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|located_in=
|located_in=
|name=hindlimb muscle
|name=hindlimb muscle
|namespace=
|namespace=FANTOM
|obo_creation_date=
|obo_creation_date=
|part_of=UBERON:0002103;;UBERON:0004482
|part_of=UBERON:0002103;;UBERON:0004482

Latest revision as of 17:41, 12 September 2014

Name:hindlimb muscle
Namespace:FANTOM
Definition:"A muscle organ that is part of a hindlimb [Obol]." [OBOL:automatic]
Xrefs:
links:

AAO:0000222
EFO:0001928

FMA:37368
Synonyms: "free lower limb muscle" EXACT [FMA:37368]
"hind limb muscle organ" EXACT [OBOL:automatic]
"hindlimb muscle organ" EXACT [OBOL:automatic]
"inferior member muscle organ" EXACT [OBOL:automatic]
"lower extremity muscle organ" EXACT [OBOL:automatic]
"muscle of posterior limb" EXACT [UBERON:cjm]
"muscle organ of hind limb" EXACT [OBOL:automatic]
"muscle organ of hindlimb" EXACT [OBOL:automatic]
"muscle organ of inferior member" EXACT [OBOL:automatic]
"muscle organ of lower extremity" EXACT [OBOL:automatic]

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0003661(limb muscle),UBERON:0014795(pelvic appendage muscle)
part_of:UBERON:0002103(hindlimb),UBERON:0004482(musculature of lower limb)



Children

is a:UBERON:0001377 (quadriceps femoris),UBERON:0001379 (vastus lateralis),UBERON:0001383 (muscle of leg)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology

Human (Homo sapiens)

Mouse (Mus musculus)


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0003663 (hindlimb muscle), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
5.42e-195FFCP PHASE1:Hg19::chr4:186423235..186423240,-#_518e77f9424f1d1436e0b529a9736a1bp@chr4:186423235..186423240, -
5.42e-195FFCP PHASE2:Hg19::chr2:179396370..179396375,-#_518e77f9424f1d1436e0b529a9736a1bp@chr2:179396370..179396375, -
5.42e-195FFCP PHASE1:Hg19::chr22:25535147..25535150,+#_518e77f9424f1d1436e0b529a9736a1bp@chr22:25535147..25535150, +
5.42e-195FFCP PHASE1:Hg19::chr10:79759687..79759690,+#_518e77f9424f1d1436e0b529a9736a1bp@chr10:79759687..79759690, +
5.42e-195FFCP PHASE2:Hg19::chr10:97176812..97176813,+#_518e77f9424f1d1436e0b529a9736a1bp@chr10:97176812..97176813, +
5.42e-195FFCP PHASE1:Hg19::chr2:179396370..179396375,-#_518e77f9424f1d1436e0b529a9736a1bp@chr2:179396370..179396375, -
5.42e-195FFCP PHASE2:Hg19::chr4:85166508..85166512,+#_518e77f9424f1d1436e0b529a9736a1bp@chr4:85166508..85166512, +
5.42e-195FFCP PHASE2:Hg19::chr7:128483294..128483304,+#_518e77f9424f1d1436e0b529a9736a1bp@chr7:128483294..128483304, +
5.42e-195FFCP PHASE2:Hg19::chr11:3691037..3691040,+#_518e77f9424f1d1436e0b529a9736a1bp@chr11:3691037..3691040, +
5.42e-195FFCP PHASE1:Hg19::chr4:85166508..85166512,+#_518e77f9424f1d1436e0b529a9736a1bp@chr4:85166508..85166512, +
5.42e-195FFCP PHASE2:Hg19::chr10:79759687..79759690,+#_518e77f9424f1d1436e0b529a9736a1bp@chr10:79759687..79759690, +
5.42e-195FFCP PHASE1:Hg19::chr7:128483294..128483304,+#_518e77f9424f1d1436e0b529a9736a1bp@chr7:128483294..128483304, +
5.42e-195FFCP PHASE2:Hg19::chr2:76859417..76859418,+#_518e77f9424f1d1436e0b529a9736a1bp@chr2:76859417..76859418, +
5.42e-195FFCP PHASE2:Hg19::chr4:186423235..186423240,-#_518e77f9424f1d1436e0b529a9736a1bp@chr4:186423235..186423240, -
5.42e-195FFCP PHASE2:Hg19::chr22:25535147..25535150,+#_518e77f9424f1d1436e0b529a9736a1bp@chr22:25535147..25535150, +
5.42e-195FFCP PHASE1:Hg19::chr10:97176812..97176813,+#_518e77f9424f1d1436e0b529a9736a1bp@chr10:97176812..97176813, +
5.42e-195FFCP PHASE1:Hg19::chr2:76859417..76859418,+#_518e77f9424f1d1436e0b529a9736a1bp@chr2:76859417..76859418, +
5.42e-195FFCP PHASE1:Hg19::chr11:3691037..3691040,+#_518e77f9424f1d1436e0b529a9736a1bp@chr11:3691037..3691040, +
9.37e-99FFCP PHASE1:Hg19::chr5:137206180..137206187,+#_06b5cabce08ea76345fa192bb806aad6p@chr5:137206180..137206187, +
9.37e-99FFCP PHASE2:Hg19::chr3:188070178..188070183,+#_06b5cabce08ea76345fa192bb806aad6p@chr3:188070178..188070183, +
9.37e-99FFCP PHASE2:Hg19::chr1:119487319..119487331,-#_06b5cabce08ea76345fa192bb806aad6p@chr1:119487319..119487331, -
9.37e-99FFCP PHASE1:Hg19::chr2:152534468..152534476,-#_06b5cabce08ea76345fa192bb806aad6p@chr2:152534468..152534476, -
9.37e-99FFCP PHASE2:Hg19::chr5:117747577..117747580,+#_06b5cabce08ea76345fa192bb806aad6p@chr5:117747577..117747580, +
9.37e-99FFCP PHASE2:Hg19::chr2:168106638..168106641,+#_06b5cabce08ea76345fa192bb806aad6p93@XIRP2
9.37e-99FFCP PHASE2:Hg19::chr13:51335579..51335582,+#_06b5cabce08ea76345fa192bb806aad6p@chr13:51335579..51335582, +
9.37e-99FFCP PHASE2:Hg19::chr15:51060095..51060101,+#_06b5cabce08ea76345fa192bb806aad6p@chr15:51060095..51060101, +
9.37e-99FFCP PHASE2:Hg19::chr22:36000901..36000903,-#_06b5cabce08ea76345fa192bb806aad6p@chr22:36000901..36000903, -
9.37e-99FFCP PHASE2:Hg19::chr2:168102721..168102729,+#_06b5cabce08ea76345fa192bb806aad6p77@XIRP2
9.37e-99FFCP PHASE1:Hg19::chr3:188070178..188070183,+#_06b5cabce08ea76345fa192bb806aad6p@chr3:188070178..188070183, +
9.37e-99FFCP PHASE1:Hg19::chr13:114067922..114067931,-#_06b5cabce08ea76345fa192bb806aad6p@chr13:114067922..114067931, -
9.37e-99FFCP PHASE2:Hg19::chr2:168105362..168105368,+#_06b5cabce08ea76345fa192bb806aad6p46@XIRP2
9.37e-99FFCP PHASE1:Hg19::chr1:119487319..119487331,-#_06b5cabce08ea76345fa192bb806aad6p@chr1:119487319..119487331, -
9.37e-99FFCP PHASE2:Hg19::chr2:179399371..179399376,-#_06b5cabce08ea76345fa192bb806aad6p@chr2:179399371..179399376, -
9.37e-99FFCP PHASE1:Hg19::chr5:117747577..117747580,+#_06b5cabce08ea76345fa192bb806aad6p@chr5:117747577..117747580, +
9.37e-99FFCP PHASE1:Hg19::chr2:168106638..168106641,+#_06b5cabce08ea76345fa192bb806aad6p93@XIRP2
9.37e-99FFCP PHASE2:Hg19::chr2:152525581..152525588,-#_06b5cabce08ea76345fa192bb806aad6p@chr2:152525581..152525588, -
9.37e-99FFCP PHASE2:Hg19::chr5:175125123..175125125,+#_06b5cabce08ea76345fa192bb806aad6p@chr5:175125123..175125125, +
9.37e-99FFCP PHASE1:Hg19::chr22:36000901..36000903,-#_06b5cabce08ea76345fa192bb806aad6p@chr22:36000901..36000903, -
9.37e-99FFCP PHASE1:Hg19::chr5:175125123..175125125,+#_06b5cabce08ea76345fa192bb806aad6p@chr5:175125123..175125125, +
9.37e-99FFCP PHASE1:Hg19::chr2:168102721..168102729,+#_06b5cabce08ea76345fa192bb806aad6p77@XIRP2
9.37e-99FFCP PHASE1:Hg19::chr8:144542829..144542857,-#_06b5cabce08ea76345fa192bb806aad6p@chr8:144542829..144542857, -
9.37e-99FFCP PHASE2:Hg19::chr2:168105987..168105994,+#_06b5cabce08ea76345fa192bb806aad6p54@XIRP2
9.37e-99FFCP PHASE1:Hg19::chr2:168105362..168105368,+#_06b5cabce08ea76345fa192bb806aad6p46@XIRP2
9.37e-99FFCP PHASE2:Hg19::chr5:172318159..172318160,+#_06b5cabce08ea76345fa192bb806aad6p@chr5:172318159..172318160, +
9.37e-99FFCP PHASE2:Hg19::chr1:145478051..145478060,-#_06b5cabce08ea76345fa192bb806aad6p@chr1:145478051..145478060, -
9.37e-99FFCP PHASE2:Hg19::chr2:179514306..179514308,-#_06b5cabce08ea76345fa192bb806aad6p@chr2:179514306..179514308, -
9.37e-99FFCP PHASE2:Hg19::chr2:168104676..168104679,+#_06b5cabce08ea76345fa192bb806aad6p104@XIRP2
9.37e-99FFCP PHASE1:Hg19::chr2:179399371..179399376,-#_06b5cabce08ea76345fa192bb806aad6p@chr2:179399371..179399376, -
9.37e-99FFCP PHASE1:Hg19::chr5:172318159..172318160,+#_06b5cabce08ea76345fa192bb806aad6p@chr5:172318159..172318160, +
9.37e-99FFCP PHASE1:Hg19::chr2:152525581..152525588,-#_06b5cabce08ea76345fa192bb806aad6p@chr2:152525581..152525588, -
9.37e-99FFCP PHASE2:Hg19::chr2:64069328..64069334,-#_06b5cabce08ea76345fa192bb806aad6p7@FLJ36848
9.37e-99FFCP PHASE2:Hg19::chr6:33716557..33716600,-#_06b5cabce08ea76345fa192bb806aad6p@chr6:33716557..33716600, -
9.37e-99FFCP PHASE1:Hg19::chr15:51060095..51060101,+#_06b5cabce08ea76345fa192bb806aad6p@chr15:51060095..51060101, +
9.37e-99FFCP PHASE2:Hg19::chr2:152499727..152499734,-#_06b5cabce08ea76345fa192bb806aad6p@chr2:152499727..152499734, -
9.37e-99FFCP PHASE2:Hg19::chr7:66800928..66800936,+#_06b5cabce08ea76345fa192bb806aad6p1@ENST00000430244, p1@uc003tvu.2
9.37e-99FFCP PHASE2:Hg19::chr2:168104926..168104927,+#_06b5cabce08ea76345fa192bb806aad6p108@XIRP2
9.37e-99FFCP PHASE2:Hg19::chr2:152520248..152520253,-#_06b5cabce08ea76345fa192bb806aad6p@chr2:152520248..152520253, -
9.37e-99FFCP PHASE1:Hg19::chr2:168105987..168105994,+#_06b5cabce08ea76345fa192bb806aad6p54@XIRP2
9.37e-99FFCP PHASE2:Hg19::chr13:114067922..114067931,-#_06b5cabce08ea76345fa192bb806aad6p@chr13:114067922..114067931, -
9.37e-99FFCP PHASE1:Hg19::chr13:51335579..51335582,+#_06b5cabce08ea76345fa192bb806aad6p@chr13:51335579..51335582, +
9.37e-99FFCP PHASE1:Hg19::chr1:145478051..145478060,-#_06b5cabce08ea76345fa192bb806aad6p@chr1:145478051..145478060, -
9.37e-99FFCP PHASE1:Hg19::chr2:179514306..179514308,-#_06b5cabce08ea76345fa192bb806aad6p@chr2:179514306..179514308, -
9.37e-99FFCP PHASE1:Hg19::chr2:168104676..168104679,+#_06b5cabce08ea76345fa192bb806aad6p104@XIRP2
9.37e-99FFCP PHASE2:Hg19::chr2:152553958..152553964,-#_06b5cabce08ea76345fa192bb806aad6p@chr2:152553958..152553964, -
9.37e-99FFCP PHASE1:Hg19::chr2:64069328..64069334,-#_06b5cabce08ea76345fa192bb806aad6p7@FLJ36848
9.37e-99FFCP PHASE1:Hg19::chr6:33716557..33716600,-#_06b5cabce08ea76345fa192bb806aad6p@chr6:33716557..33716600, -
9.37e-99FFCP PHASE1:Hg19::chr2:152553958..152553964,-#_06b5cabce08ea76345fa192bb806aad6p@chr2:152553958..152553964, -
9.37e-99FFCP PHASE1:Hg19::chr2:152499727..152499734,-#_06b5cabce08ea76345fa192bb806aad6p@chr2:152499727..152499734, -
9.37e-99FFCP PHASE1:Hg19::chr2:168104926..168104927,+#_06b5cabce08ea76345fa192bb806aad6p108@XIRP2
9.37e-99FFCP PHASE2:Hg19::chr5:137206180..137206187,+#_06b5cabce08ea76345fa192bb806aad6p@chr5:137206180..137206187, +
9.37e-99FFCP PHASE1:Hg19::chr7:66800928..66800936,+#_06b5cabce08ea76345fa192bb806aad6p1@ENST00000430244, p1@uc003tvu.2
9.37e-99FFCP PHASE2:Hg19::chr8:144542829..144542857,-#_06b5cabce08ea76345fa192bb806aad6p@chr8:144542829..144542857, -
9.37e-99FFCP PHASE1:Hg19::chr2:152520248..152520253,-#_06b5cabce08ea76345fa192bb806aad6p@chr2:152520248..152520253, -
9.37e-99FFCP PHASE2:Hg19::chr2:152534468..152534476,-#_06b5cabce08ea76345fa192bb806aad6p@chr2:152534468..152534476, -
2.55e-98FFCP PHASE2:Hg19::chr2:152566311..152566321,-#_2451e82e67006cddebb840ddfc9f1bb2p@chr2:152566311..152566321, -
2.55e-98FFCP PHASE2:Hg19::chr5:95180155..95180172,+#_2451e82e67006cddebb840ddfc9f1bb2p@chr5:95180155..95180172, +
2.55e-98FFCP PHASE1:Hg19::chr2:152566311..152566321,-#_2451e82e67006cddebb840ddfc9f1bb2p@chr2:152566311..152566321, -
2.55e-98FFCP PHASE1:Hg19::chr2:168102459..168102468,+#_2451e82e67006cddebb840ddfc9f1bb2p73@XIRP2
2.55e-98FFCP PHASE2:Hg19::chr21:47769234..47769239,+#_2451e82e67006cddebb840ddfc9f1bb2p@chr21:47769234..47769239, +
2.55e-98FFCP PHASE1:Hg19::chr22:26299595..26299605,+#_2451e82e67006cddebb840ddfc9f1bb2p@chr22:26299595..26299605, +
2.55e-98FFCP PHASE2:Hg19::chr2:152590465..152590472,-#_2451e82e67006cddebb840ddfc9f1bb2p@chr2:152590465..152590472, -
2.55e-98FFCP PHASE1:Hg19::chr10:97037060..97037066,-#_2451e82e67006cddebb840ddfc9f1bb2p@chr10:97037060..97037066, -
2.55e-98FFCP PHASE1:Hg19::chr5:95180155..95180172,+#_2451e82e67006cddebb840ddfc9f1bb2p@chr5:95180155..95180172, +
2.55e-98FFCP PHASE1:Hg19::chr21:47769234..47769239,+#_2451e82e67006cddebb840ddfc9f1bb2p@chr21:47769234..47769239, +
2.55e-98FFCP PHASE1:Hg19::chr10:29918007..29918031,-#_2451e82e67006cddebb840ddfc9f1bb2p@chr10:29918007..29918031, -
2.55e-98FFCP PHASE2:Hg19::chr18:8608021..8608050,+#_2451e82e67006cddebb840ddfc9f1bb2p@chr18:8608021..8608050, +
2.55e-98FFCP PHASE2:Hg19::chr2:179656442..179656451,-#_2451e82e67006cddebb840ddfc9f1bb2p@chr2:179656442..179656451, -
2.55e-98FFCP PHASE2:Hg19::chr3:69168368..69168389,-#_2451e82e67006cddebb840ddfc9f1bb2p@chr3:69168368..69168389, -
2.55e-98FFCP PHASE1:Hg19::chr2:152590465..152590472,-#_2451e82e67006cddebb840ddfc9f1bb2p@chr2:152590465..152590472, -
2.55e-98FFCP PHASE2:Hg19::chr12:69653866..69653876,+#_2451e82e67006cddebb840ddfc9f1bb2p@chr12:69653866..69653876, +
2.55e-98FFCP PHASE2:Hg19::chr3:35732964..35732965,+#_2451e82e67006cddebb840ddfc9f1bb2p@chr3:35732964..35732965, +
2.55e-98FFCP PHASE2:Hg19::chr2:29398214..29398229,+#_2451e82e67006cddebb840ddfc9f1bb2p27@CLIP4
2.55e-98FFCP PHASE1:Hg19::chr2:179656442..179656451,-#_2451e82e67006cddebb840ddfc9f1bb2p@chr2:179656442..179656451, -
2.55e-98FFCP PHASE2:Hg19::chr10:29918007..29918031,-#_2451e82e67006cddebb840ddfc9f1bb2p@chr10:29918007..29918031, -
2.55e-98FFCP PHASE1:Hg19::chr3:69168368..69168389,-#_2451e82e67006cddebb840ddfc9f1bb2p@chr3:69168368..69168389, -
2.55e-98FFCP PHASE1:Hg19::chr12:122884464..122884467,-#_2451e82e67006cddebb840ddfc9f1bb2p38@CLIP1
2.55e-98FFCP PHASE2:Hg19::chr10:97037060..97037066,-#_2451e82e67006cddebb840ddfc9f1bb2p@chr10:97037060..97037066, -
2.55e-98FFCP PHASE2:Hg19::chr12:122884464..122884467,-#_2451e82e67006cddebb840ddfc9f1bb2p38@CLIP1
2.55e-98FFCP PHASE2:Hg19::chr6:125535391..125535409,+#_2451e82e67006cddebb840ddfc9f1bb2p@chr6:125535391..125535409, +
2.55e-98FFCP PHASE2:Hg19::chr3:46924232..46924241,+#_2451e82e67006cddebb840ddfc9f1bb2p@chr3:46924232..46924241, +

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