Personal tools

UBERON:0004145: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
Line 13: Line 13:
|located_in=
|located_in=
|name=outflow tract
|name=outflow tract
|namespace=
|namespace=FANTOM
|obo_creation_date=
|obo_creation_date=
|part_of=UBERON:0000948
|part_of=UBERON:0000948

Latest revision as of 17:44, 12 September 2014

Name:outflow tract
Namespace:FANTOM
Definition:"The outflow tract is the portion of the heart through which blood flows into the arteries" [GO:0003151]
Xrefs:
links:

EHDAA2:0001351
EHDAA:464
EHDAA:798
EMAPA:16229
EMAPA:16346
MA:0000100
VHOG:0000670

XAO:0004139
Synonyms: "cardiac outflow tract" EXACT []

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:UBERON:0004111(anatomical conduit),UBERON:0004120(mesoderm-derived structure)
part_of:UBERON:0000948(heart)



Children

is a:UBERON:0005946 (outflow tract of atrium)
part of:UBERON:0002061 (truncus arteriosus),UBERON:0005432 (aortic sac)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology


Human (Homo sapiens)


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0004145 (outflow tract), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data


P-valueFFCPShort description
2.39e-66FFCP PHASE1:Hg19::chr5:99390735..99390743,-#_df11e64c5aae224e317c3df105654009p@chr5:99390735..99390743, -
2.39e-66FFCP PHASE2:Hg19::chr15:86272097..86272099,+#_df11e64c5aae224e317c3df105654009p@chr15:86272097..86272099, +
2.39e-66FFCP PHASE1:Hg19::chr4:70707713..70707716,-#_df11e64c5aae224e317c3df105654009p@chr4:70707713..70707716, -
2.39e-66FFCP PHASE2:Hg19::chr8:90366581..90366594,-#_df11e64c5aae224e317c3df105654009p@chr8:90366581..90366594, -
2.39e-66FFCP PHASE2:Hg19::chr5:99390735..99390743,-#_df11e64c5aae224e317c3df105654009p@chr5:99390735..99390743, -
2.39e-66FFCP PHASE1:Hg19::chr6:21648948..21648949,+#_df11e64c5aae224e317c3df105654009p@chr6:21648948..21648949, +
2.39e-66FFCP PHASE2:Hg19::chr4:70707713..70707716,-#_df11e64c5aae224e317c3df105654009p@chr4:70707713..70707716, -
2.39e-66FFCP PHASE1:Hg19::chr15:86272097..86272099,+#_df11e64c5aae224e317c3df105654009p@chr15:86272097..86272099, +
2.39e-66FFCP PHASE2:Hg19::chr6:21648948..21648949,+#_df11e64c5aae224e317c3df105654009p@chr6:21648948..21648949, +
2.39e-66FFCP PHASE2:Hg19::chr10:92678409..92678410,-#_df11e64c5aae224e317c3df105654009p@chr10:92678409..92678410, -
2.39e-66FFCP PHASE1:Hg19::chr8:90366581..90366594,-#_df11e64c5aae224e317c3df105654009p@chr8:90366581..90366594, -
2.39e-66FFCP PHASE1:Hg19::chr10:92678409..92678410,-#_df11e64c5aae224e317c3df105654009p@chr10:92678409..92678410, -
4.27e-34FFCP PHASE2:Hg19::chr7:97501400..97501407,-#_4d71d4568247cf45f1d0764967789ab6p16@ASNS
4.27e-34FFCP PHASE1:Hg19::chr2:179656442..179656451,-#_4d71d4568247cf45f1d0764967789ab6p@chr2:179656442..179656451, -
4.27e-34FFCP PHASE2:Hg19::chr4:70707556..70707558,-#_4d71d4568247cf45f1d0764967789ab6p@chr4:70707556..70707558, -
4.27e-34FFCP PHASE2:Hg19::chr2:179656442..179656451,-#_4d71d4568247cf45f1d0764967789ab6p@chr2:179656442..179656451, -
4.27e-34FFCP PHASE1:Hg19::chr7:97501400..97501407,-#_4d71d4568247cf45f1d0764967789ab6p16@ASNS
4.27e-34FFCP PHASE1:Hg19::chr4:70707556..70707558,-#_4d71d4568247cf45f1d0764967789ab6p@chr4:70707556..70707558, -
5.96e-34FFCP PHASE1:Hg19::chr6:70647888..70647891,+#_a3173b30cba201f8c81718bc27b18edep@chr6:70647888..70647891, +
5.96e-34FFCP PHASE1:Hg19::chr14:68375236..68375240,+#_a3173b30cba201f8c81718bc27b18edep9@RAD51B
5.96e-34FFCP PHASE2:Hg19::chrX:23072856..23072859,-#_a3173b30cba201f8c81718bc27b18edep@chrX:23072856..23072859, -
5.96e-34FFCP PHASE2:Hg19::chr2:103287330..103287331,+#_a3173b30cba201f8c81718bc27b18edep@chr2:103287330..103287331, +
5.96e-34FFCP PHASE1:Hg19::chr5:157747715..157747717,+#_a3173b30cba201f8c81718bc27b18edep@chr5:157747715..157747717, +
5.96e-34FFCP PHASE2:Hg19::chr22:36000901..36000903,-#_a3173b30cba201f8c81718bc27b18edep@chr22:36000901..36000903, -
5.96e-34FFCP PHASE2:Hg19::chr6:70647888..70647891,+#_a3173b30cba201f8c81718bc27b18edep@chr6:70647888..70647891, +
5.96e-34FFCP PHASE1:Hg19::chr18:39821929..39821932,+#_a3173b30cba201f8c81718bc27b18edep@chr18:39821929..39821932, +
5.96e-34FFCP PHASE2:Hg19::chr10:90749902..90749913,+#_a3173b30cba201f8c81718bc27b18edep14@FAS
5.96e-34FFCP PHASE2:Hg19::chr18:4003453..4003457,+#_a3173b30cba201f8c81718bc27b18edep@chr18:4003453..4003457, +
5.96e-34FFCP PHASE1:Hg19::chrX:136514398..136514433,-#_a3173b30cba201f8c81718bc27b18edep@chrX:136514398..136514433, -
5.96e-34FFCP PHASE1:Hg19::chr6:104898467..104898469,-#_a3173b30cba201f8c81718bc27b18edep@chr6:104898467..104898469, -
5.96e-34FFCP PHASE1:Hg19::chr10:90749902..90749913,+#_a3173b30cba201f8c81718bc27b18edep14@FAS
5.96e-34FFCP PHASE2:Hg19::chr5:157747715..157747717,+#_a3173b30cba201f8c81718bc27b18edep@chr5:157747715..157747717, +
5.96e-34FFCP PHASE1:Hg19::chr3:158928407..158928414,+#_a3173b30cba201f8c81718bc27b18edep@chr3:158928407..158928414, +
5.96e-34FFCP PHASE1:Hg19::chr8:24530708..24530710,+#_a3173b30cba201f8c81718bc27b18edep@chr8:24530708..24530710, +
5.96e-34FFCP PHASE2:Hg19::chrX:136514398..136514433,-#_a3173b30cba201f8c81718bc27b18edep@chrX:136514398..136514433, -
5.96e-34FFCP PHASE1:Hg19::chr6:21666284..21666297,+#_a3173b30cba201f8c81718bc27b18edep26@LINC00340
5.96e-34FFCP PHASE2:Hg19::chr14:68375236..68375240,+#_a3173b30cba201f8c81718bc27b18edep9@RAD51B
5.96e-34FFCP PHASE2:Hg19::chr18:39821929..39821932,+#_a3173b30cba201f8c81718bc27b18edep@chr18:39821929..39821932, +
5.96e-34FFCP PHASE1:Hg19::chr8:120651826..120651840,-#_a3173b30cba201f8c81718bc27b18edep@chr8:120651826..120651840, -
5.96e-34FFCP PHASE2:Hg19::chr3:158928407..158928414,+#_a3173b30cba201f8c81718bc27b18edep@chr3:158928407..158928414, +
5.96e-34FFCP PHASE2:Hg19::chr6:21666284..21666297,+#_a3173b30cba201f8c81718bc27b18edep26@LINC00340
5.96e-34FFCP PHASE2:Hg19::chr6:104898467..104898469,-#_a3173b30cba201f8c81718bc27b18edep@chr6:104898467..104898469, -
5.96e-34FFCP PHASE1:Hg19::chrX:23072856..23072859,-#_a3173b30cba201f8c81718bc27b18edep@chrX:23072856..23072859, -
5.96e-34FFCP PHASE2:Hg19::chr8:120651826..120651840,-#_a3173b30cba201f8c81718bc27b18edep@chr8:120651826..120651840, -
5.96e-34FFCP PHASE2:Hg19::chr8:24530708..24530710,+#_a3173b30cba201f8c81718bc27b18edep@chr8:24530708..24530710, +
5.96e-34FFCP PHASE1:Hg19::chr2:103287330..103287331,+#_a3173b30cba201f8c81718bc27b18edep@chr2:103287330..103287331, +
5.96e-34FFCP PHASE1:Hg19::chr18:4003453..4003457,+#_a3173b30cba201f8c81718bc27b18edep@chr18:4003453..4003457, +
5.96e-34FFCP PHASE1:Hg19::chr22:36000901..36000903,-#_a3173b30cba201f8c81718bc27b18edep@chr22:36000901..36000903, -
7.7e-34FFCP PHASE2:Hg19::chr4:189415102..189415107,+#_7d0d1c21e6034d6d62de60940aaa7f9bp@chr4:189415102..189415107, +
7.7e-34FFCP PHASE1:Hg19::chr4:189415102..189415107,+#_7d0d1c21e6034d6d62de60940aaa7f9bp@chr4:189415102..189415107, +
7.02e-25FFCP PHASE2:Hg19::chr4:78301661..78301667,+#_a1b3756e364eaedfa61a7338888ddc7dp@chr4:78301661..78301667, +
7.02e-25FFCP PHASE1:Hg19::chr4:78301661..78301667,+#_a1b3756e364eaedfa61a7338888ddc7dp@chr4:78301661..78301667, +
7.93e-25FFCP PHASE1:Hg19::chr18:19748335..19748350,-#_d894459693f821b4003523077a89fa38p@chr18:19748335..19748350, -
7.93e-25FFCP PHASE2:Hg19::chr18:19748335..19748350,-#_d894459693f821b4003523077a89fa38p@chr18:19748335..19748350, -
7.93e-25FFCP PHASE2:Hg19::chr10:131715912..131715914,-#_d894459693f821b4003523077a89fa38p@chr10:131715912..131715914, -
7.93e-25FFCP PHASE1:Hg19::chr10:131715912..131715914,-#_d894459693f821b4003523077a89fa38p@chr10:131715912..131715914, -
2.62e-23FFCP PHASE1:Hg19::chr2:123518588..123518591,+#_aad002c29e2ce6b4b00a26c9b41bac46p@chr2:123518588..123518591, +
2.62e-23FFCP PHASE2:Hg19::chr2:26508626..26508627,+#_aad002c29e2ce6b4b00a26c9b41bac46p@chr2:26508626..26508627, +
2.62e-23FFCP PHASE2:Hg19::chr19:35531882..35531893,-#_aad002c29e2ce6b4b00a26c9b41bac46p@chr19:35531882..35531893, -
2.62e-23FFCP PHASE1:Hg19::chr4:70707608..70707615,-#_aad002c29e2ce6b4b00a26c9b41bac46p@chr4:70707608..70707615, -
2.62e-23FFCP PHASE1:Hg19::chr2:218844837..218844842,-#_aad002c29e2ce6b4b00a26c9b41bac46p@chr2:218844837..218844842, -
2.62e-23FFCP PHASE1:Hg19::chr14:30786806..30786810,-#_aad002c29e2ce6b4b00a26c9b41bac46p@chr14:30786806..30786810, -
2.62e-23FFCP PHASE2:Hg19::chr5:99385820..99385831,-#_aad002c29e2ce6b4b00a26c9b41bac46p@chr5:99385820..99385831, -
2.62e-23FFCP PHASE2:Hg19::chr2:123518588..123518591,+#_aad002c29e2ce6b4b00a26c9b41bac46p@chr2:123518588..123518591, +
2.62e-23FFCP PHASE2:Hg19::chr4:70707608..70707615,-#_aad002c29e2ce6b4b00a26c9b41bac46p@chr4:70707608..70707615, -
2.62e-23FFCP PHASE1:Hg19::chr17:77026478..77026512,+#_aad002c29e2ce6b4b00a26c9b41bac46p@chr17:77026478..77026512, +
2.62e-23FFCP PHASE2:Hg19::chr2:218844837..218844842,-#_aad002c29e2ce6b4b00a26c9b41bac46p@chr2:218844837..218844842, -
2.62e-23FFCP PHASE2:Hg19::chr16:10783399..10783401,+#_aad002c29e2ce6b4b00a26c9b41bac46p@chr16:10783399..10783401, +
2.62e-23FFCP PHASE1:Hg19::chr19:35531882..35531893,-#_aad002c29e2ce6b4b00a26c9b41bac46p@chr19:35531882..35531893, -
2.62e-23FFCP PHASE2:Hg19::chr17:77026478..77026512,+#_aad002c29e2ce6b4b00a26c9b41bac46p@chr17:77026478..77026512, +
2.62e-23FFCP PHASE1:Hg19::chr5:99385820..99385831,-#_aad002c29e2ce6b4b00a26c9b41bac46p@chr5:99385820..99385831, -
2.62e-23FFCP PHASE1:Hg19::chr2:26508626..26508627,+#_aad002c29e2ce6b4b00a26c9b41bac46p@chr2:26508626..26508627, +
2.62e-23FFCP PHASE1:Hg19::chr16:10783399..10783401,+#_aad002c29e2ce6b4b00a26c9b41bac46p@chr16:10783399..10783401, +
2.62e-23FFCP PHASE2:Hg19::chr14:30786806..30786810,-#_aad002c29e2ce6b4b00a26c9b41bac46p@chr14:30786806..30786810, -
3.27e-23FFCP PHASE2:Hg19::chr5:150006500..150006508,-#_2b0d4afb1774409545fefc8d74427a38p@chr5:150006500..150006508, -
3.27e-23FFCP PHASE1:Hg19::chr7:54897467..54897468,-#_2b0d4afb1774409545fefc8d74427a38p@chr7:54897467..54897468, -
3.27e-23FFCP PHASE2:Hg19::chr5:175084679..175084689,+#_2b0d4afb1774409545fefc8d74427a38p4@HRH2
3.27e-23FFCP PHASE2:Hg19::chr1:189481131..189481134,-#_2b0d4afb1774409545fefc8d74427a38p@chr1:189481131..189481134, -
3.27e-23FFCP PHASE2:Hg19::chr13:56591781..56591785,-#_2b0d4afb1774409545fefc8d74427a38p@chr13:56591781..56591785, -
3.27e-23FFCP PHASE2:Hg19::chr1:1154360..1154365,-#_2b0d4afb1774409545fefc8d74427a38p@chr1:1154360..1154365, -
3.27e-23FFCP PHASE1:Hg19::chr8:127508635..127508640,+#_2b0d4afb1774409545fefc8d74427a38p@chr8:127508635..127508640, +
3.27e-23FFCP PHASE1:Hg19::chr1:1154830..1154841,-#_2b0d4afb1774409545fefc8d74427a38p@chr1:1154830..1154841, -
3.27e-23FFCP PHASE1:Hg19::chr18:40200823..40200829,+#_2b0d4afb1774409545fefc8d74427a38p@chr18:40200823..40200829, +
3.27e-23FFCP PHASE1:Hg19::chr2:238859791..238859796,-#_2b0d4afb1774409545fefc8d74427a38p@chr2:238859791..238859796, -
3.27e-23FFCP PHASE1:Hg19::chr19:44414731..44414733,+#_2b0d4afb1774409545fefc8d74427a38p@chr19:44414731..44414733, +
3.27e-23FFCP PHASE2:Hg19::chr7:54897467..54897468,-#_2b0d4afb1774409545fefc8d74427a38p@chr7:54897467..54897468, -
3.27e-23FFCP PHASE1:Hg19::chr17:76824975..76824978,-#_2b0d4afb1774409545fefc8d74427a38p@chr17:76824975..76824978, -
3.27e-23FFCP PHASE1:Hg19::chr6:104465140..104465144,-#_2b0d4afb1774409545fefc8d74427a38p@chr6:104465140..104465144, -
3.27e-23FFCP PHASE2:Hg19::chr3:135043585..135043591,-#_2b0d4afb1774409545fefc8d74427a38p@chr3:135043585..135043591, -
3.27e-23FFCP PHASE1:Hg19::chr13:56591781..56591785,-#_2b0d4afb1774409545fefc8d74427a38p@chr13:56591781..56591785, -
3.27e-23FFCP PHASE2:Hg19::chr1:1154830..1154841,-#_2b0d4afb1774409545fefc8d74427a38p@chr1:1154830..1154841, -
3.27e-23FFCP PHASE2:Hg19::chr11:131614903..131614910,-#_2b0d4afb1774409545fefc8d74427a38p@chr11:131614903..131614910, -
3.27e-23FFCP PHASE2:Hg19::chr2:238859791..238859796,-#_2b0d4afb1774409545fefc8d74427a38p@chr2:238859791..238859796, -
3.27e-23FFCP PHASE1:Hg19::chr1:203150041..203150049,-#_2b0d4afb1774409545fefc8d74427a38p@chr1:203150041..203150049, -
3.27e-23FFCP PHASE2:Hg19::chr10:63204408..63204412,-#_2b0d4afb1774409545fefc8d74427a38p@chr10:63204408..63204412, -
3.27e-23FFCP PHASE2:Hg19::chr17:76824975..76824978,-#_2b0d4afb1774409545fefc8d74427a38p@chr17:76824975..76824978, -
3.27e-23FFCP PHASE2:Hg19::chr8:127508635..127508640,+#_2b0d4afb1774409545fefc8d74427a38p@chr8:127508635..127508640, +
3.27e-23FFCP PHASE1:Hg19::chr11:131614903..131614910,-#_2b0d4afb1774409545fefc8d74427a38p@chr11:131614903..131614910, -
3.27e-23FFCP PHASE2:Hg19::chr10:54464025..54464030,+#_2b0d4afb1774409545fefc8d74427a38p@chr10:54464025..54464030, +
3.27e-23FFCP PHASE2:Hg19::chr18:40200823..40200829,+#_2b0d4afb1774409545fefc8d74427a38p@chr18:40200823..40200829, +