UBERON:0005292: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| Line 13: | Line 13: | ||
|located_in= | |located_in= | ||
|name=extraembryonic tissue | |name=extraembryonic tissue | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date= | |obo_creation_date= | ||
|part_of=UBERON:0016887 | |part_of=UBERON:0016887 | ||
Latest revision as of 17:52, 12 September 2014
| Name: | extraembryonic tissue | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Definition: | "Portion of tissue that is contiguous with the embryo and is comprised of portions of tissue or cells that will not contribute to the embryo." [UBERON:cjm] | ||
| Xrefs: |
| ||
| Synonyms: | "extra-embryonic tissue" EXACT [] |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0000478(extraembryonic structure),UBERON:0000479(tissue) |
|---|---|
| part_of: | UBERON:0016887(entire extraembryonic component) |
Children
| is a: | UBERON:0003422 (mesenchyme of umbilical cord),UBERON:0005728 (extraembryonic mesoderm) |
|---|---|
| part of: | FF:0000216 (chicken extraembryonic),FF:0000218 (chicken embryo extraembryonic tissue day7 HH32),FF:0000219 (chicken embryo extraembryonic tissue day15 HH41) |
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0005292 (extraembryonic tissue), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
No analysis results
