UBERON:0009034: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 13: | Line 13: | ||
|located_in= | |located_in= | ||
|name=stomach region | |name=stomach region | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date= | |obo_creation_date= | ||
|part_of=UBERON:0000945 | |part_of=UBERON:0000945 |
Latest revision as of 18:04, 12 September 2014
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
is_a: | UBERON:0000064(organ part) |
---|---|
part_of: | UBERON:0000945(stomach) |
Children
is a: | UBERON:0003281 (mesentery of stomach) |
---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0009034 (stomach region), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
P-value | FFCP | Short description |
---|---|---|
8.98e-131 | FFCP PHASE2:Hg19::chr1:159172187..159172197,-#_069ce0ef634b7ffd8806660c6e03de89 | p1@uc001ftm.1 |
8.98e-131 | FFCP PHASE1:Hg19::chr10:98014943..98014960,-#_069ce0ef634b7ffd8806660c6e03de89 | p@chr10:98014943..98014960, - |
8.98e-131 | FFCP PHASE2:Hg19::chr9:127260615..127260651,-#_069ce0ef634b7ffd8806660c6e03de89 | p@chr9:127260615..127260651, - |
8.98e-131 | FFCP PHASE1:Hg19::chr21:28820892..28820899,-#_069ce0ef634b7ffd8806660c6e03de89 | p4@ENST00000420186, p4@uc002ymh.2 |
8.98e-131 | FFCP PHASE2:Hg19::chr8:22436248..22436259,+#_069ce0ef634b7ffd8806660c6e03de89 | p11@PDLIM2 |
8.98e-131 | FFCP PHASE1:Hg19::chr9:124516729..124516752,+#_069ce0ef634b7ffd8806660c6e03de89 | p@chr9:124516729..124516752, + |
8.98e-131 | FFCP PHASE1:Hg19::chr11:56859638..56859643,-#_069ce0ef634b7ffd8806660c6e03de89 | p@chr11:56859638..56859643, - |
8.98e-131 | FFCP PHASE2:Hg19::chr9:133973310..133973321,+#_069ce0ef634b7ffd8806660c6e03de89 | p18@AIF1L |
8.98e-131 | FFCP PHASE1:Hg19::chr11:925449..925458,+#_069ce0ef634b7ffd8806660c6e03de89 | p17@AP2A2 |
8.98e-131 | FFCP PHASE2:Hg19::chr21:28820941..28820952,-#_069ce0ef634b7ffd8806660c6e03de89 | p2@ENST00000420186, p2@uc002ymh.2 |
8.98e-131 | FFCP PHASE1:Hg19::chr8:22424709..22424716,-#_069ce0ef634b7ffd8806660c6e03de89 | p2@ENST00000517384 |
8.98e-131 | FFCP PHASE2:Hg19::chr17:78171885..78171900,+#_069ce0ef634b7ffd8806660c6e03de89 | p@chr17:78171885..78171900, + |
8.98e-131 | FFCP PHASE2:Hg19::chr11:56859584..56859589,-#_069ce0ef634b7ffd8806660c6e03de89 | p@chr11:56859584..56859589, - |
8.98e-131 | FFCP PHASE2:Hg19::chr9:127269462..127269484,-#_069ce0ef634b7ffd8806660c6e03de89 | p2@NR5A1 |
8.98e-131 | FFCP PHASE1:Hg19::chr11:1891326..1891337,-#_069ce0ef634b7ffd8806660c6e03de89 | p@chr11:1891326..1891337, - |
8.98e-131 | FFCP PHASE1:Hg19::chr19:32401253..32401271,-#_069ce0ef634b7ffd8806660c6e03de89 | p@chr19:32401253..32401271, - |
8.98e-131 | FFCP PHASE2:Hg19::chr6:152639579..152639586,-#_069ce0ef634b7ffd8806660c6e03de89 | p60@SYNE1 |
8.98e-131 | FFCP PHASE1:Hg19::chr21:28820911..28820933,-#_069ce0ef634b7ffd8806660c6e03de89 | p1@ENST00000420186, p1@uc002ymh.2 |
8.98e-131 | FFCP PHASE1:Hg19::chr17:78171885..78171900,+#_069ce0ef634b7ffd8806660c6e03de89 | p@chr17:78171885..78171900, + |
8.98e-131 | FFCP PHASE2:Hg19::chr8:47834174..47834213,+#_069ce0ef634b7ffd8806660c6e03de89 | p1@ENST00000524012 |
8.98e-131 | FFCP PHASE1:Hg19::chr11:56859693..56859701,-#_069ce0ef634b7ffd8806660c6e03de89 | p@chr11:56859693..56859701, - |
8.98e-131 | FFCP PHASE1:Hg19::chr8:22424743..22424759,-#_069ce0ef634b7ffd8806660c6e03de89 | p1@ENST00000517384 |
8.98e-131 | FFCP PHASE1:Hg19::chrX:69645652..69645664,+#_069ce0ef634b7ffd8806660c6e03de89 | p7@GDPD2 |
8.98e-131 | FFCP PHASE2:Hg19::chr7:22259740..22259751,-#_069ce0ef634b7ffd8806660c6e03de89 | p19@RAPGEF5 |
8.98e-131 | FFCP PHASE2:Hg19::chr21:28820954..28820963,-#_069ce0ef634b7ffd8806660c6e03de89 | p3@ENST00000420186, p3@uc002ymh.2 |
8.98e-131 | FFCP PHASE2:Hg19::chr11:56859603..56859606,-#_069ce0ef634b7ffd8806660c6e03de89 | p@chr11:56859603..56859606, - |
8.98e-131 | FFCP PHASE2:Hg19::chr9:127269488..127269495,-#_069ce0ef634b7ffd8806660c6e03de89 | p5@NR5A1 |
8.98e-131 | FFCP PHASE2:Hg19::chr9:124516729..124516752,+#_069ce0ef634b7ffd8806660c6e03de89 | p@chr9:124516729..124516752, + |
8.98e-131 | FFCP PHASE1:Hg19::chr11:56859584..56859589,-#_069ce0ef634b7ffd8806660c6e03de89 | p@chr11:56859584..56859589, - |
8.98e-131 | FFCP PHASE2:Hg19::chr6:119812455..119812476,-#_069ce0ef634b7ffd8806660c6e03de89 | p1@uc003pyn.1 |
8.98e-131 | FFCP PHASE1:Hg19::chr1:159172187..159172197,-#_069ce0ef634b7ffd8806660c6e03de89 | p1@uc001ftm.1 |
8.98e-131 | FFCP PHASE1:Hg19::chr9:79894790..79894797,+#_069ce0ef634b7ffd8806660c6e03de89 | p10@VPS13A |
8.98e-131 | FFCP PHASE1:Hg19::chr21:28820941..28820952,-#_069ce0ef634b7ffd8806660c6e03de89 | p2@ENST00000420186, p2@uc002ymh.2 |
8.98e-131 | FFCP PHASE1:Hg19::chr15:95561320..95561328,-#_069ce0ef634b7ffd8806660c6e03de89 | p@chr15:95561320..95561328, - |
8.98e-131 | FFCP PHASE1:Hg19::chr4:76901930..76901942,+#_069ce0ef634b7ffd8806660c6e03de89 | p1@ENST00000501239 |
8.98e-131 | FFCP PHASE1:Hg19::chr8:22436248..22436259,+#_069ce0ef634b7ffd8806660c6e03de89 | p11@PDLIM2 |
8.98e-131 | FFCP PHASE2:Hg19::chr10:98014908..98014919,-#_069ce0ef634b7ffd8806660c6e03de89 | p@chr10:98014908..98014919, - |
8.98e-131 | FFCP PHASE2:Hg19::chr1:28520450..28520453,-#_069ce0ef634b7ffd8806660c6e03de89 | p21@PTAFR |
8.98e-131 | FFCP PHASE2:Hg19::chr11:56859608..56859619,-#_069ce0ef634b7ffd8806660c6e03de89 | p@chr11:56859608..56859619, - |
8.98e-131 | FFCP PHASE1:Hg19::chr9:127269434..127269438,-#_069ce0ef634b7ffd8806660c6e03de89 | p8@NR5A1 |
8.98e-131 | FFCP PHASE2:Hg19::chr8:22424709..22424716,-#_069ce0ef634b7ffd8806660c6e03de89 | p2@ENST00000517384 |
8.98e-131 | FFCP PHASE2:Hg19::chr1:157811772..157811796,-#_069ce0ef634b7ffd8806660c6e03de89 | p7@CD5L |
8.98e-131 | FFCP PHASE1:Hg19::chr11:56859603..56859606,-#_069ce0ef634b7ffd8806660c6e03de89 | p@chr11:56859603..56859606, - |
8.98e-131 | FFCP PHASE1:Hg19::chr14:75904485..75904519,+#_069ce0ef634b7ffd8806660c6e03de89 | p12@JDP2 |
8.98e-131 | FFCP PHASE2:Hg19::chr21:28820892..28820899,-#_069ce0ef634b7ffd8806660c6e03de89 | p4@ENST00000420186, p4@uc002ymh.2 |
8.98e-131 | FFCP PHASE1:Hg19::chr21:28820954..28820963,-#_069ce0ef634b7ffd8806660c6e03de89 | p3@ENST00000420186, p3@uc002ymh.2 |
8.98e-131 | FFCP PHASE1:Hg19::chr9:127260615..127260651,-#_069ce0ef634b7ffd8806660c6e03de89 | p@chr9:127260615..127260651, - |
8.98e-131 | FFCP PHASE2:Hg19::chr16:84218794..84218800,+#_069ce0ef634b7ffd8806660c6e03de89 | p@chr16:84218794..84218800, + |
8.98e-131 | FFCP PHASE1:Hg19::chr6:152639579..152639586,-#_069ce0ef634b7ffd8806660c6e03de89 | p60@SYNE1 |
8.98e-131 | FFCP PHASE1:Hg19::chr9:133973310..133973321,+#_069ce0ef634b7ffd8806660c6e03de89 | p18@AIF1L |
8.98e-131 | FFCP PHASE2:Hg19::chr15:95561320..95561328,-#_069ce0ef634b7ffd8806660c6e03de89 | p@chr15:95561320..95561328, - |
8.98e-131 | FFCP PHASE2:Hg19::chr10:98014943..98014960,-#_069ce0ef634b7ffd8806660c6e03de89 | p@chr10:98014943..98014960, - |
8.98e-131 | FFCP PHASE1:Hg19::chr8:47834174..47834213,+#_069ce0ef634b7ffd8806660c6e03de89 | p1@ENST00000524012 |
8.98e-131 | FFCP PHASE2:Hg19::chr11:56859638..56859643,-#_069ce0ef634b7ffd8806660c6e03de89 | p@chr11:56859638..56859643, - |
8.98e-131 | FFCP PHASE2:Hg19::chr19:32401253..32401271,-#_069ce0ef634b7ffd8806660c6e03de89 | p@chr19:32401253..32401271, - |
8.98e-131 | FFCP PHASE1:Hg19::chr9:127269462..127269484,-#_069ce0ef634b7ffd8806660c6e03de89 | p2@NR5A1 |
8.98e-131 | FFCP PHASE1:Hg19::chr10:98014908..98014919,-#_069ce0ef634b7ffd8806660c6e03de89 | p@chr10:98014908..98014919, - |
8.98e-131 | FFCP PHASE2:Hg19::chr8:22424743..22424759,-#_069ce0ef634b7ffd8806660c6e03de89 | p1@ENST00000517384 |
8.98e-131 | FFCP PHASE2:Hg19::chrX:69645652..69645664,+#_069ce0ef634b7ffd8806660c6e03de89 | p7@GDPD2 |
8.98e-131 | FFCP PHASE1:Hg19::chr11:56859608..56859619,-#_069ce0ef634b7ffd8806660c6e03de89 | p@chr11:56859608..56859619, - |
8.98e-131 | FFCP PHASE2:Hg19::chr11:1891326..1891337,-#_069ce0ef634b7ffd8806660c6e03de89 | p@chr11:1891326..1891337, - |
8.98e-131 | FFCP PHASE2:Hg19::chr11:925449..925458,+#_069ce0ef634b7ffd8806660c6e03de89 | p17@AP2A2 |
8.98e-131 | FFCP PHASE2:Hg19::chr21:28820911..28820933,-#_069ce0ef634b7ffd8806660c6e03de89 | p1@ENST00000420186, p1@uc002ymh.2 |
8.98e-131 | FFCP PHASE2:Hg19::chr9:127269434..127269438,-#_069ce0ef634b7ffd8806660c6e03de89 | p8@NR5A1 |
8.98e-131 | FFCP PHASE1:Hg19::chr6:119812455..119812476,-#_069ce0ef634b7ffd8806660c6e03de89 | p1@uc003pyn.1 |
8.98e-131 | FFCP PHASE2:Hg19::chr14:75904485..75904519,+#_069ce0ef634b7ffd8806660c6e03de89 | p12@JDP2 |
8.98e-131 | FFCP PHASE1:Hg19::chr1:28520450..28520453,-#_069ce0ef634b7ffd8806660c6e03de89 | p21@PTAFR |
8.98e-131 | FFCP PHASE2:Hg19::chr9:79894790..79894797,+#_069ce0ef634b7ffd8806660c6e03de89 | p10@VPS13A |
8.98e-131 | FFCP PHASE1:Hg19::chr1:157811772..157811796,-#_069ce0ef634b7ffd8806660c6e03de89 | p7@CD5L |
8.98e-131 | FFCP PHASE1:Hg19::chr7:22259740..22259751,-#_069ce0ef634b7ffd8806660c6e03de89 | p19@RAPGEF5 |
8.98e-131 | FFCP PHASE2:Hg19::chr4:76901930..76901942,+#_069ce0ef634b7ffd8806660c6e03de89 | p1@ENST00000501239 |
8.98e-131 | FFCP PHASE2:Hg19::chr11:56859693..56859701,-#_069ce0ef634b7ffd8806660c6e03de89 | p@chr11:56859693..56859701, - |
8.98e-131 | FFCP PHASE1:Hg19::chr16:84218794..84218800,+#_069ce0ef634b7ffd8806660c6e03de89 | p@chr16:84218794..84218800, + |
8.98e-131 | FFCP PHASE1:Hg19::chr9:127269488..127269495,-#_069ce0ef634b7ffd8806660c6e03de89 | p5@NR5A1 |
6.24e-88 | FFCP PHASE2:Hg19::chr21:40459334..40459341,+#_45ccae8a5e7ffdd8308d5127d411f176 | p@chr21:40459334..40459341, + |
6.24e-88 | FFCP PHASE2:Hg19::chr11:56859722..56859732,-#_45ccae8a5e7ffdd8308d5127d411f176 | p@chr11:56859722..56859732, - |
6.24e-88 | FFCP PHASE1:Hg19::chr4:146461014..146461025,+#_45ccae8a5e7ffdd8308d5127d411f176 | p@chr4:146461014..146461025, + |
6.24e-88 | FFCP PHASE1:Hg19::chr1:21011608..21011618,-#_45ccae8a5e7ffdd8308d5127d411f176 | p15@KIF17 |
6.24e-88 | FFCP PHASE1:Hg19::chr3:130267501..130267516,+#_45ccae8a5e7ffdd8308d5127d411f176 | p@chr3:130267501..130267516, + |
6.24e-88 | FFCP PHASE1:Hg19::chr9:127267367..127267383,+#_45ccae8a5e7ffdd8308d5127d411f176 | p@chr9:127267367..127267383, + |
6.24e-88 | FFCP PHASE1:Hg19::chr11:56859722..56859732,-#_45ccae8a5e7ffdd8308d5127d411f176 | p@chr11:56859722..56859732, - |
6.24e-88 | FFCP PHASE1:Hg19::chr19:32401274..32401289,-#_45ccae8a5e7ffdd8308d5127d411f176 | p@chr19:32401274..32401289, - |
6.24e-88 | FFCP PHASE1:Hg19::chr21:40459334..40459341,+#_45ccae8a5e7ffdd8308d5127d411f176 | p@chr21:40459334..40459341, + |
6.24e-88 | FFCP PHASE2:Hg19::chr22:36718586..36718593,-#_45ccae8a5e7ffdd8308d5127d411f176 | p@chr22:36718586..36718593, - |
6.24e-88 | FFCP PHASE2:Hg19::chr9:127267367..127267383,+#_45ccae8a5e7ffdd8308d5127d411f176 | p@chr9:127267367..127267383, + |
6.24e-88 | FFCP PHASE2:Hg19::chr4:146461014..146461025,+#_45ccae8a5e7ffdd8308d5127d411f176 | p@chr4:146461014..146461025, + |
6.24e-88 | FFCP PHASE2:Hg19::chr3:130267501..130267516,+#_45ccae8a5e7ffdd8308d5127d411f176 | p@chr3:130267501..130267516, + |
6.24e-88 | FFCP PHASE2:Hg19::chr1:21011608..21011618,-#_45ccae8a5e7ffdd8308d5127d411f176 | p15@KIF17 |
6.24e-88 | FFCP PHASE1:Hg19::chr22:36718586..36718593,-#_45ccae8a5e7ffdd8308d5127d411f176 | p@chr22:36718586..36718593, - |
6.24e-88 | FFCP PHASE2:Hg19::chr19:32401274..32401289,-#_45ccae8a5e7ffdd8308d5127d411f176 | p@chr19:32401274..32401289, - |
9.74e-88 | FFCP PHASE1:Hg19::chr16:70680361..70680370,+#_566ed821600d60a7078cda2ba503c55b | p6@IL34 |
9.74e-88 | FFCP PHASE1:Hg19::chr2:1508349..1508357,+#_566ed821600d60a7078cda2ba503c55b | p@chr2:1508349..1508357, + |
9.74e-88 | FFCP PHASE2:Hg19::chr12:72481040..72481051,+#_566ed821600d60a7078cda2ba503c55b | p19@TRHDE |
9.74e-88 | FFCP PHASE2:Hg19::chr2:128321491..128321509,+#_566ed821600d60a7078cda2ba503c55b | p@chr2:128321491..128321509, + |
9.74e-88 | FFCP PHASE2:Hg19::chr14:24168655..24168686,+#_566ed821600d60a7078cda2ba503c55b | p@chr14:24168655..24168686, + |
9.74e-88 | FFCP PHASE2:Hg19::chr7:151070957..151070988,+#_566ed821600d60a7078cda2ba503c55b | p@chr7:151070957..151070988, + |
9.74e-88 | FFCP PHASE2:Hg19::chr2:1508349..1508357,+#_566ed821600d60a7078cda2ba503c55b | p@chr2:1508349..1508357, + |
9.74e-88 | FFCP PHASE1:Hg19::chr7:151070957..151070988,+#_566ed821600d60a7078cda2ba503c55b | p@chr7:151070957..151070988, + |
9.74e-88 | FFCP PHASE1:Hg19::chr2:128321491..128321509,+#_566ed821600d60a7078cda2ba503c55b | p@chr2:128321491..128321509, + |
9.74e-88 | FFCP PHASE1:Hg19::chr12:72481040..72481051,+#_566ed821600d60a7078cda2ba503c55b | p19@TRHDE |