UBERON:0009891: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| Line 13: | Line 13: | ||
|located_in= | |located_in= | ||
|name=facial mesenchyme | |name=facial mesenchyme | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date= | |obo_creation_date= | ||
|part_of=UBERON:0001456 | |part_of=UBERON:0001456 | ||
Latest revision as of 18:07, 12 September 2014
| Name: | facial mesenchyme |
|---|---|
| Namespace: | FANTOM |
| Synonyms: |
"face mesenchyme" EXACT [] "mesenchyme of face" EXACT [] |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0003104(mesenchyme) |
|---|---|
| part_of: | UBERON:0001456(face) |
Children
| is a: | UBERON:0003314 (eye mesenchyme),UBERON:0003323 (mesenchyme of upper jaw) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10813-111B3 (normal embryonic palatal mesenchymal cell line:HEPM)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0009891 (facial mesenchyme), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 5.42e-195 | FFCP PHASE2:Hg19::chr17:54893192..54893195,-#_930fd3d9fd41a8aeb5f0e35287420327 | p14@C17orf67 |
| 5.42e-195 | FFCP PHASE1:Hg19::chr17:54893192..54893195,-#_930fd3d9fd41a8aeb5f0e35287420327 | p14@C17orf67 |
| 9.37e-99 | FFCP PHASE2:Hg19::chr17:54893292..54893300,-#_4b681a217f8e7a5d40dcd03b807a5576 | p13@C17orf67 |
| 9.37e-99 | FFCP PHASE1:Hg19::chr8:57353655..57353662,-#_4b681a217f8e7a5d40dcd03b807a5576 | p@chr8:57353655..57353662, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr17:54893213..54893220,-#_4b681a217f8e7a5d40dcd03b807a5576 | p12@C17orf67 |
| 9.37e-99 | FFCP PHASE1:Hg19::chr17:54893269..54893278,-#_4b681a217f8e7a5d40dcd03b807a5576 | p11@C17orf67 |
| 9.37e-99 | FFCP PHASE2:Hg19::chr17:54893213..54893220,-#_4b681a217f8e7a5d40dcd03b807a5576 | p12@C17orf67 |
| 9.37e-99 | FFCP PHASE2:Hg19::chr8:57353655..57353662,-#_4b681a217f8e7a5d40dcd03b807a5576 | p@chr8:57353655..57353662, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr17:54893292..54893300,-#_4b681a217f8e7a5d40dcd03b807a5576 | p13@C17orf67 |
| 9.37e-99 | FFCP PHASE2:Hg19::chr17:54893269..54893278,-#_4b681a217f8e7a5d40dcd03b807a5576 | p11@C17orf67 |
| 2.39e-66 | FFCP PHASE2:Hg19::chr4:151503647..151503656,+#_75809ceded3f35ef49a7b7f5e7ad943e | p14@MAB21L2 |
| 2.39e-66 | FFCP PHASE1:Hg19::chr5:75912402..75912418,-#_75809ceded3f35ef49a7b7f5e7ad943e | p@chr5:75912402..75912418, - |
| 2.39e-66 | FFCP PHASE2:Hg19::chr5:75912402..75912418,-#_75809ceded3f35ef49a7b7f5e7ad943e | p@chr5:75912402..75912418, - |
| 2.39e-66 | FFCP PHASE1:Hg19::chr4:151503647..151503656,+#_75809ceded3f35ef49a7b7f5e7ad943e | p14@MAB21L2 |
| 4.66e-66 | FFCP PHASE2:Hg19::chr4:151505582..151505614,+#_b70042c91e603b9c297cea143a4c6c78 | p@chr4:151505582..151505614, + |
| 4.66e-66 | FFCP PHASE1:Hg19::chr4:151505582..151505614,+#_b70042c91e603b9c297cea143a4c6c78 | p@chr4:151505582..151505614, + |
| 1.46e-50 | FFCP PHASE1:Hg19::chr3:157823323..157823328,+#_eebf8300764649e52c3e584c1e72979b | p17@RSRC1 |
| 1.46e-50 | FFCP PHASE1:Hg19::chr8:57354278..57354286,+#_eebf8300764649e52c3e584c1e72979b | p@chr8:57354278..57354286, + |
| 1.46e-50 | FFCP PHASE1:Hg19::chr17:54893196..54893207,-#_eebf8300764649e52c3e584c1e72979b | p9@C17orf67 |
| 1.46e-50 | FFCP PHASE2:Hg19::chr8:57354278..57354286,+#_eebf8300764649e52c3e584c1e72979b | p@chr8:57354278..57354286, + |
| 1.46e-50 | FFCP PHASE2:Hg19::chr17:54893196..54893207,-#_eebf8300764649e52c3e584c1e72979b | p9@C17orf67 |
| 1.46e-50 | FFCP PHASE2:Hg19::chr3:157823323..157823328,+#_eebf8300764649e52c3e584c1e72979b | p17@RSRC1 |
| 2.42e-50 | FFCP PHASE1:Hg19::chr8:57802672..57802682,-#_cda7c19ee9518ff6f76ab343be5eb0c6 | p@chr8:57802672..57802682, - |
| 2.42e-50 | FFCP PHASE2:Hg19::chr8:57802672..57802682,-#_cda7c19ee9518ff6f76ab343be5eb0c6 | p@chr8:57802672..57802682, - |
| 3.99e-50 | FFCP PHASE1:Hg19::chr5:75913767..75913778,-#_4a0ca559379440531b20f6e43168bca3 | p@chr5:75913767..75913778, - |
| 3.99e-50 | FFCP PHASE1:Hg19::chr17:76930661..76930674,+#_4a0ca559379440531b20f6e43168bca3 | p1@AK123925 |
| 3.99e-50 | FFCP PHASE2:Hg19::chr17:76930661..76930674,+#_4a0ca559379440531b20f6e43168bca3 | p1@AK123925 |
| 3.99e-50 | FFCP PHASE2:Hg19::chr5:75913767..75913778,-#_4a0ca559379440531b20f6e43168bca3 | p@chr5:75913767..75913778, - |
| 3.99e-50 | FFCP PHASE1:Hg19::chr12:85673913..85673919,+#_4a0ca559379440531b20f6e43168bca3 | p7@ALX1 |
| 3.99e-50 | FFCP PHASE2:Hg19::chr12:85673913..85673919,+#_4a0ca559379440531b20f6e43168bca3 | p7@ALX1 |
| 6.58e-50 | FFCP PHASE2:Hg19::chr2:33519090..33519092,+#_4b6ffdbf5a33020a6febaf00aded4435 | p@chr2:33519090..33519092, + |
| 6.58e-50 | FFCP PHASE1:Hg19::chr2:33519090..33519092,+#_4b6ffdbf5a33020a6febaf00aded4435 | p@chr2:33519090..33519092, + |
| 6.58e-50 | FFCP PHASE1:Hg19::chr13:28961248..28961262,-#_4b6ffdbf5a33020a6febaf00aded4435 | p23@FLT1 |
| 6.58e-50 | FFCP PHASE2:Hg19::chr13:28961248..28961262,-#_4b6ffdbf5a33020a6febaf00aded4435 | p23@FLT1 |
| 6.62e-41 | FFCP PHASE2:Hg19::chr8:57353666..57353675,-#_57ec2ff8a9828d0af51b231fd5846ef5 | p@chr8:57353666..57353675, - |
| 6.62e-41 | FFCP PHASE1:Hg19::chr8:57353779..57353790,-#_57ec2ff8a9828d0af51b231fd5846ef5 | p@chr8:57353779..57353790, - |
| 6.62e-41 | FFCP PHASE1:Hg19::chr8:57354143..57354152,+#_57ec2ff8a9828d0af51b231fd5846ef5 | p@chr8:57354143..57354152, + |
| 6.62e-41 | FFCP PHASE1:Hg19::chr8:57353666..57353675,-#_57ec2ff8a9828d0af51b231fd5846ef5 | p@chr8:57353666..57353675, - |
| 6.62e-41 | FFCP PHASE2:Hg19::chr8:57354143..57354152,+#_57ec2ff8a9828d0af51b231fd5846ef5 | p@chr8:57354143..57354152, + |
| 6.62e-41 | FFCP PHASE2:Hg19::chr8:57353779..57353790,-#_57ec2ff8a9828d0af51b231fd5846ef5 | p@chr8:57353779..57353790, - |
| 1.48e-40 | FFCP PHASE2:Hg19::chr1:75600308..75600316,+#_e250bb612d2654441261ddc728e552bf | p8@LHX8 |
| 1.48e-40 | FFCP PHASE1:Hg19::chr20:49253452..49253461,-#_e250bb612d2654441261ddc728e552bf | p12@FAM65C |
| 1.48e-40 | FFCP PHASE1:Hg19::chr1:6615391..6615401,+#_e250bb612d2654441261ddc728e552bf | p2@TAS1R1 |
| 1.48e-40 | FFCP PHASE2:Hg19::chr20:49253452..49253461,-#_e250bb612d2654441261ddc728e552bf | p12@FAM65C |
| 1.48e-40 | FFCP PHASE1:Hg19::chr1:75600308..75600316,+#_e250bb612d2654441261ddc728e552bf | p8@LHX8 |
| 1.48e-40 | FFCP PHASE2:Hg19::chr1:6615391..6615401,+#_e250bb612d2654441261ddc728e552bf | p2@TAS1R1 |
| 2.21e-40 | FFCP PHASE2:Hg19::chr5:75912831..75912842,-#_d301a19ab2da529ed8cdc1012f6c8898 | p@chr5:75912831..75912842, - |
| 2.21e-40 | FFCP PHASE2:Hg19::chr16:67687543..67687559,-#_d301a19ab2da529ed8cdc1012f6c8898 | p@chr16:67687543..67687559, - |
| 2.21e-40 | FFCP PHASE1:Hg19::chr5:75912831..75912842,-#_d301a19ab2da529ed8cdc1012f6c8898 | p@chr5:75912831..75912842, - |
| 2.21e-40 | FFCP PHASE1:Hg19::chr16:67687543..67687559,-#_d301a19ab2da529ed8cdc1012f6c8898 | p@chr16:67687543..67687559, - |
| 3.3e-40 | FFCP PHASE2:Hg19::chr6:46190219..46190230,-#_1a382709cb5bfdf222f8a7999a4763fb | p@chr6:46190219..46190230, - |
| 3.3e-40 | FFCP PHASE1:Hg19::chr9:125165007..125165016,+#_1a382709cb5bfdf222f8a7999a4763fb | p@chr9:125165007..125165016, + |
| 3.3e-40 | FFCP PHASE1:Hg19::chr6:46190219..46190230,-#_1a382709cb5bfdf222f8a7999a4763fb | p@chr6:46190219..46190230, - |
| 3.3e-40 | FFCP PHASE2:Hg19::chr9:125165007..125165016,+#_1a382709cb5bfdf222f8a7999a4763fb | p@chr9:125165007..125165016, + |
| 1.84e-34 | FFCP PHASE1:Hg19::chr8:57359557..57359570,-#_618dcdb8eb02b4a502f0c37781b2dd2f | p5@PENK |
| 1.84e-34 | FFCP PHASE1:Hg19::chr10:15760985..15760992,-#_618dcdb8eb02b4a502f0c37781b2dd2f | p@chr10:15760985..15760992, - |
| 1.84e-34 | FFCP PHASE2:Hg19::chr10:15760985..15760992,-#_618dcdb8eb02b4a502f0c37781b2dd2f | p@chr10:15760985..15760992, - |
| 1.84e-34 | FFCP PHASE2:Hg19::chr8:57359557..57359570,-#_618dcdb8eb02b4a502f0c37781b2dd2f | p5@PENK |
| 1.84e-34 | FFCP PHASE1:Hg19::chr4:8594472..8594473,+#_618dcdb8eb02b4a502f0c37781b2dd2f | p4@CPZ |
| 1.84e-34 | FFCP PHASE2:Hg19::chr4:8594472..8594473,+#_618dcdb8eb02b4a502f0c37781b2dd2f | p4@CPZ |
| 2.58e-34 | FFCP PHASE1:Hg19::chr14:61125018..61125037,-#_fe684edc55d4394ae7b368f0b7ca6da2 | p9@SIX1 |
| 2.58e-34 | FFCP PHASE2:Hg19::chr14:61125018..61125037,-#_fe684edc55d4394ae7b368f0b7ca6da2 | p9@SIX1 |
| 5.05e-34 | FFCP PHASE1:Hg19::chr6:134327986..134327991,-#_e45e25cb863f901b4053b3d09ab4a8c2 | p@chr6:134327986..134327991, - |
| 5.05e-34 | FFCP PHASE2:Hg19::chr6:134327986..134327991,-#_e45e25cb863f901b4053b3d09ab4a8c2 | p@chr6:134327986..134327991, - |
| 7.06e-34 | FFCP PHASE2:Hg19::chr8:57353676..57353688,-#_05b81fe0a3d33f780b6783da05aae210 | p@chr8:57353676..57353688, - |
| 7.06e-34 | FFCP PHASE1:Hg19::chr8:57353676..57353688,-#_05b81fe0a3d33f780b6783da05aae210 | p@chr8:57353676..57353688, - |
| 7.06e-34 | FFCP PHASE1:Hg19::chr13:58291223..58291226,+#_05b81fe0a3d33f780b6783da05aae210 | p@chr13:58291223..58291226, + |
| 7.06e-34 | FFCP PHASE2:Hg19::chr13:58291223..58291226,+#_05b81fe0a3d33f780b6783da05aae210 | p@chr13:58291223..58291226, + |
| 9.85e-34 | FFCP PHASE2:Hg19::chr5:19721484..19721507,-#_200deedf04683242732787dc36c135ff | p@chr5:19721484..19721507, - |
| 9.85e-34 | FFCP PHASE2:Hg19::chrX:133792540..133792551,-#_200deedf04683242732787dc36c135ff | p4@PLAC1 |
| 9.85e-34 | FFCP PHASE1:Hg19::chr5:127873659..127873667,-#_200deedf04683242732787dc36c135ff | p12@FBN2 |
| 9.85e-34 | FFCP PHASE1:Hg19::chr5:19721484..19721507,-#_200deedf04683242732787dc36c135ff | p@chr5:19721484..19721507, - |
| 9.85e-34 | FFCP PHASE1:Hg19::chrX:133792540..133792551,-#_200deedf04683242732787dc36c135ff | p4@PLAC1 |
| 9.85e-34 | FFCP PHASE2:Hg19::chr5:127873659..127873667,-#_200deedf04683242732787dc36c135ff | p12@FBN2 |
| 7.48e-30 | FFCP PHASE1:Hg19::chr8:57353982..57353991,-#_62cdbaba6dd0abb3188ec3f19b9e978f | p@chr8:57353982..57353991, - |
| 7.48e-30 | FFCP PHASE2:Hg19::chr8:57354360..57354367,+#_62cdbaba6dd0abb3188ec3f19b9e978f | p@chr8:57354360..57354367, + |
| 7.48e-30 | FFCP PHASE2:Hg19::chr8:57353982..57353991,-#_62cdbaba6dd0abb3188ec3f19b9e978f | p@chr8:57353982..57353991, - |
| 7.48e-30 | FFCP PHASE1:Hg19::chr8:57353804..57353821,-#_62cdbaba6dd0abb3188ec3f19b9e978f | p@chr8:57353804..57353821, - |
| 7.48e-30 | FFCP PHASE1:Hg19::chr8:57354360..57354367,+#_62cdbaba6dd0abb3188ec3f19b9e978f | p@chr8:57354360..57354367, + |
| 7.48e-30 | FFCP PHASE2:Hg19::chr8:57353804..57353821,-#_62cdbaba6dd0abb3188ec3f19b9e978f | p@chr8:57353804..57353821, - |
| 9.99e-30 | FFCP PHASE2:Hg19::chr3:157824322..157824334,-#_c5ab1198510fe012bfc15536dfa2d653 | p7@SHOX2 |
| 9.99e-30 | FFCP PHASE1:Hg19::chr10:15762107..15762114,-#_c5ab1198510fe012bfc15536dfa2d653 | p10@ITGA8 |
| 9.99e-30 | FFCP PHASE2:Hg19::chr10:15762107..15762114,-#_c5ab1198510fe012bfc15536dfa2d653 | p10@ITGA8 |
| 9.99e-30 | FFCP PHASE1:Hg19::chr3:157824322..157824334,-#_c5ab1198510fe012bfc15536dfa2d653 | p7@SHOX2 |
| 1.33e-29 | FFCP PHASE1:Hg19::chr17:79071218..79071221,-#_620c069908e487ca8e55758ad3224367 | p@chr17:79071218..79071221, - |
| 1.33e-29 | FFCP PHASE1:Hg19::chr22:28193943..28193956,-#_620c069908e487ca8e55758ad3224367 | p@chr22:28193943..28193956, - |
| 1.33e-29 | FFCP PHASE2:Hg19::chrX:132670143..132670152,-#_620c069908e487ca8e55758ad3224367 | p@chrX:132670143..132670152, - |
| 1.33e-29 | FFCP PHASE2:Hg19::chr17:79071218..79071221,-#_620c069908e487ca8e55758ad3224367 | p@chr17:79071218..79071221, - |
| 1.33e-29 | FFCP PHASE2:Hg19::chr22:28193943..28193956,-#_620c069908e487ca8e55758ad3224367 | p@chr22:28193943..28193956, - |
| 1.33e-29 | FFCP PHASE1:Hg19::chrX:132670143..132670152,-#_620c069908e487ca8e55758ad3224367 | p@chrX:132670143..132670152, - |
| 1.78e-29 | FFCP PHASE1:Hg19::chr1:21904551..21904569,-#_b1bb2a8351a0617dc735a566d780e496 | p@chr1:21904551..21904569, - |
| 1.78e-29 | FFCP PHASE2:Hg19::chr1:21904551..21904569,-#_b1bb2a8351a0617dc735a566d780e496 | p@chr1:21904551..21904569, - |
| 3.16e-29 | FFCP PHASE1:Hg19::chr8:57359975..57359992,-#_744f258f22dacfe0a3cf8f728a4f62eb | p@chr8:57359975..57359992, - |
| 3.16e-29 | FFCP PHASE2:Hg19::chr1:156470861..156470868,-#_744f258f22dacfe0a3cf8f728a4f62eb | p18@MEF2D |
| 3.16e-29 | FFCP PHASE1:Hg19::chr14:89044406..89044416,+#_744f258f22dacfe0a3cf8f728a4f62eb | p@chr14:89044406..89044416, + |
| 3.16e-29 | FFCP PHASE2:Hg19::chr14:89044406..89044416,+#_744f258f22dacfe0a3cf8f728a4f62eb | p@chr14:89044406..89044416, + |
| 3.16e-29 | FFCP PHASE2:Hg19::chr8:57359975..57359992,-#_744f258f22dacfe0a3cf8f728a4f62eb | p@chr8:57359975..57359992, - |
| 3.16e-29 | FFCP PHASE1:Hg19::chr1:156470861..156470868,-#_744f258f22dacfe0a3cf8f728a4f62eb | p18@MEF2D |
| 4.2e-29 | FFCP PHASE2:Hg19::chr1:6615468..6615485,+#_dd00ec884cca86fb4980a7093e5d6955 | p1@TAS1R1 |
| 4.2e-29 | FFCP PHASE1:Hg19::chr4:151503350..151503358,+#_dd00ec884cca86fb4980a7093e5d6955 | p11@MAB21L2 |
