FF:11309-117C4: Difference between revisions

Revision as of 15:02, 15 May 2017

Name:	Dendritic Cells - plasmacytoid, donor2
Species:	Human (Homo sapiens)
Library ID:	CNhs12196
Sample type:	primary cells
Genomic View:	UCSC
FANTOM CAT:	1, 2, 3, 4, 5, 6, 7, 8, 9, 10
CAGEd-oPOSSUM:	link

Additional information

Sample information

strain	NA
tissue	blood
dev stage	25 years old adult
sex	male
age	25
cell type	dendritic cell, plasmacytoid
cell line	NA
company	3HBiomedical
collaboration	FANTOM5 OSC CORE (contact: Al Forrest)
External link for information	[{{{sample_info_link}}} {{{sample_info_link}}}]

RNA information

lot number	PDC738
catalog number	3H100-72-5
sample type	total RNA
extraction protocol (Details)	OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0

CAGE Accession numbers

Method		Sample accession id
CAGE		SAMD00004698

Library accession numbers

Library id		Method		Exp. accession id		Run accession id
CNhs12196		CAGE		DRX008073		DRR008945

Accession ID Hg19

Library id		BAM		CTSS
CNhs12196		DRZ000370		DRZ001755

Download raw sequence, BAM & CTSS

Hg19

BAM	CTSS
[{{{hg19bam}}} download]	[{{{hg19ctss}}} donwload]

Hg38

BAM	CTSS
[{{{hg38bam}}} download]	[{{{hg38ctss}}} donwload]

Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.

Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. Analyst:NA link to dataset. data

Coexpression cluster	score
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral	0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate	0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural	0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial	0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel	0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS	0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils	0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural	0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis	-0.203
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy	0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood	0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate	0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma	-0.256
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial	0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic	0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat	0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal	0
C113-thyroid-throat-lung-lymph-small-colon-trachea	0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma	0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus	0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea	0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal	0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula	0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD19	0
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils	0
C120-immature-salivary-tongue-skin-cervical-CD14-CD34	0
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B	0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal	0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils	0.331
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte	0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus	0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain	0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil	0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP	0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small	0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD4	0
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar	0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin	0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived	0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma	0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis	0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum	0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal	0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic	0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal	0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal	0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen	0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen	0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B	0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair	0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast	0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis	0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal	0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell	0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral	0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal	0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum	0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue	0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small	0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast	0.154
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung	0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular	0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate	0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid	0
C156-plasma-splenic-hereditary-B-large-xeroderma-b	0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea	0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen	0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal	0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain	0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral	0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta	0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon	0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal	0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma	0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial	0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung	0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD4	0
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral	0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma	0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage	0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet	0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye	0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes	0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose	0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils	0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural	0.402
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19	0.397
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous	0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus	0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil	0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood	0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle	-0.661
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar	0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute	0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt	0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid	0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis	0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid	0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage	0.434
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat	0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen	0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma	0
C190-colon-small-rectum-duodenum-appendix-temporal-oral	0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic	0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD4	0
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD14	0
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar	0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal	0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial	0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival	0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes	0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma	0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast	0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat	0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed	-0.23
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall	0
C202-salivary-skin-penis-tongue-uterus-cervical-immature	0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic	0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD34	0
C205-mycosis-cord-hairy-xeroderma-CD4-B-b	0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary	0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte	0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous	0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen	0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic	0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil	0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney	0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD34	0
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral	0.196
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain	0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature	0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD34	0
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital	0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary	0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum	0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD19	0
C220-Adipocyte-mature-left-breast-skin-liver-adipose	0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular	0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte	-0.406
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte	0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal	0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal	0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal	0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue	0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult	0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart	0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD14	0
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung	0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis	0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum	0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF7	0
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma	0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas	0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma	0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial	0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell	0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy	0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral	0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal	0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus	-0.00872
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach	0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing	0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage	0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic	0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory	0.505
C247-pons-locus-medulla-spinal-paracentral-medial-occipital	0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast	0.196
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial	0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall	0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD4	0.157
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue	0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma	0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum	0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris	0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast	0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla	0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral	0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric	0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing	0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole	0.196
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood	0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal	0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms	0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil	0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute	0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8	0.434
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast	0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear	0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate	0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD4	0
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung	0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth	0.153
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum	0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil	0.196
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast	0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte	0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal	0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal	0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma	0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory	0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial	0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic	0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD4	0.196
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small	-0.623
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat	0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular	0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus	0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic	0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial	0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal	0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal	0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left	0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart	0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature	0.341
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea	0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal	0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD34	0.196
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral	0.331
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte	0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed	0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral	0.0186
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital	0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood	0.196
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala	0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal	0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils	0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic	0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid	0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole	0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus	0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea	0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory	0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen	0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile	0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula	0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt	0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea	0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms	0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD133	0
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus	0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small	0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal	0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon	0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder	0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature	1.151
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS	0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel	0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix	0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus	0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma	0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas	0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma	0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas	0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma	0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary	0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature	0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma	0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue	0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural	0.434
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H9	0
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic	0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature	0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical	0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b	0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph	0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute	0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic	0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils	0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus	0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung	0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma	0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK	0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast	0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue	0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate	0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left	0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal	0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy	0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral	0.196
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell	0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD8	0
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea	0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal	0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD34	0
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast	0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid	0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD34	0
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic	0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon	0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma	0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma	0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic	0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived	0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic	0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left	0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen	0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair	0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole	0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular	0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma	0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid	0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix	0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain	0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole	0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid	0

Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed. Analyst:NA link to dataset. data

TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression Analyst: Michiel de Hoon link to dataset. data

library id: CNhs12196

Jaspar motif	Logo	P-value
MA0002.2	MA0002.2	2.54078e-8
MA0003.1	MA0003.1	0.368
MA0004.1	MA0004.1	0.346
MA0006.1	MA0006.1	0.539
MA0007.1	MA0007.1	0.733
MA0009.1	MA0009.1	0.131
MA0014.1	MA0014.1	0.819
MA0017.1	MA0017.1	0.572
MA0018.2	MA0018.2	0.00174
MA0019.1	MA0019.1	0.489
MA0024.1	MA0024.1	0.216
MA0025.1	MA0025.1	0.00678
MA0027.1	MA0027.1	0.345
MA0028.1	MA0028.1	0.0257
MA0029.1	MA0029.1	0.53
MA0030.1	MA0030.1	0.146
MA0031.1	MA0031.1	0.0895
MA0035.2	MA0035.2	0.806
MA0038.1	MA0038.1	0.525
MA0039.2	MA0039.2	0.544
MA0040.1	MA0040.1	0.0743
MA0041.1	MA0041.1	0.401
MA0042.1	MA0042.1	0.158
MA0043.1	MA0043.1	0.00256
MA0046.1	MA0046.1	0.713
MA0047.2	MA0047.2	0.416
MA0048.1	MA0048.1	2.469e-4
MA0050.1	MA0050.1	8.53609e-9
MA0051.1	MA0051.1	4.02508e-5
MA0052.1	MA0052.1	0.0124
MA0055.1	MA0055.1	2.38659e-5
MA0057.1	MA0057.1	0.286
MA0058.1	MA0058.1	0.132
MA0059.1	MA0059.1	0.477
MA0060.1	MA0060.1	0.352
MA0061.1	MA0061.1	7.585e-13
MA0062.2	MA0062.2	1.67708e-12
MA0065.2	MA0065.2	0.0555
MA0066.1	MA0066.1	0.198
MA0067.1	MA0067.1	0.0017
MA0068.1	MA0068.1	0.415
MA0069.1	MA0069.1	0.52
MA0070.1	MA0070.1	0.397
MA0071.1	MA0071.1	0.863
MA0072.1	MA0072.1	0.521
MA0073.1	MA0073.1	0.284
MA0074.1	MA0074.1	0.892
MA0076.1	MA0076.1	0.00106
MA0077.1	MA0077.1	0.314
MA0078.1	MA0078.1	0.978
MA0079.2	MA0079.2	0.449
MA0080.2	MA0080.2	3.86085e-13
MA0081.1	MA0081.1	6.94711e-6
MA0083.1	MA0083.1	0.229
MA0084.1	MA0084.1	0.192
MA0087.1	MA0087.1	0.501
MA0088.1	MA0088.1	0.825
MA0090.1	MA0090.1	2.0366e-4
MA0091.1	MA0091.1	0.0121
MA0092.1	MA0092.1	0.891
MA0093.1	MA0093.1	0.349
MA0099.2	MA0099.2	7.96107e-5
MA0100.1	MA0100.1	0.489
MA0101.1	MA0101.1	3.86269e-13
MA0102.2	MA0102.2	0.0177
MA0103.1	MA0103.1	0.0303
MA0104.2	MA0104.2	0.0689
MA0105.1	MA0105.1	4.38539e-10
MA0106.1	MA0106.1	0.0898
MA0107.1	MA0107.1	1.53274e-13
MA0108.2	MA0108.2	0.0212
MA0111.1	MA0111.1	0.553
MA0112.2	MA0112.2	0.0904
MA0113.1	MA0113.1	0.852
MA0114.1	MA0114.1	0.74
MA0115.1	MA0115.1	0.262
MA0116.1	MA0116.1	0.00179
MA0117.1	MA0117.1	0.0596
MA0119.1	MA0119.1	0.641
MA0122.1	MA0122.1	0.218
MA0124.1	MA0124.1	0.665
MA0125.1	MA0125.1	0.431
MA0131.1	MA0131.1	0.613
MA0135.1	MA0135.1	0.592
MA0136.1	MA0136.1	5.75089e-15
MA0137.2	MA0137.2	0.991
MA0138.2	MA0138.2	0.955
MA0139.1	MA0139.1	0.993
MA0140.1	MA0140.1	0.622
MA0141.1	MA0141.1	0.896
MA0142.1	MA0142.1	0.877
MA0143.1	MA0143.1	0.861
MA0144.1	MA0144.1	0.711
MA0145.1	MA0145.1	0.418
MA0146.1	MA0146.1	0.158
MA0147.1	MA0147.1	0.139
MA0148.1	MA0148.1	0.605
MA0149.1	MA0149.1	0.93
MA0150.1	MA0150.1	0.00165
MA0152.1	MA0152.1	0.116
MA0153.1	MA0153.1	0.0489
MA0154.1	MA0154.1	0.00248
MA0155.1	MA0155.1	0.755
MA0156.1	MA0156.1	5.89353e-12
MA0157.1	MA0157.1	0.209
MA0159.1	MA0159.1	0.299
MA0160.1	MA0160.1	0.577
MA0162.1	MA0162.1	0.73
MA0163.1	MA0163.1	4.94958e-6
MA0164.1	MA0164.1	0.823
MA0258.1	MA0258.1	0.167
MA0259.1	MA0259.1	0.462

FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above Analyst: Michiel de Hoon link to dataset. data

library id: CNhs12196

Novel motif	Logo	P-value
1	1	0.625
10	10	0.0455
100	100	0.561
101	101	0.666
102	102	0.59
103	103	0.0512
104	104	0.646
105	105	0.411
106	106	0.0432
107	107	0.347
108	108	0.147
109	109	0.155
11	11	0.27
110	110	0.692
111	111	0.736
112	112	0.906
113	113	0.687
114	114	0.499
115	115	0.493
116	116	0.345
117	117	0.00532
118	118	0.58
119	119	0.302
12	12	0.426
120	120	0.439
121	121	0.552
122	122	0.239
123	123	0.827
124	124	0.0909
125	125	0.347
126	126	0.129
127	127	0.405
128	128	0.374
129	129	0.369
13	13	0.0945
130	130	0.619
131	131	0.648
132	132	0.0123
133	133	0.0959
134	134	0.512
135	135	0.417
136	136	0.686
137	137	0.00167
138	138	0.915
139	139	0.141
14	14	0.266
140	140	0.624
141	141	0.582
142	142	0.288
143	143	0.00145
144	144	0.867
145	145	0.52
146	146	0.591
147	147	0.122
148	148	0.0814
149	149	0.361
15	15	0.0833
150	150	0.579
151	151	0.314
152	152	0.749
153	153	0.386
154	154	0.992
155	155	0.141
156	156	0.659
157	157	0.734
158	158	0.378
159	159	0.191
16	16	0.559
160	160	0.475
161	161	0.208
162	162	0.215
163	163	0.986
164	164	0.563
165	165	0.409
166	166	0.472
167	167	0.547
168	168	0.828
169	169	0.958
17	17	0.966
18	18	0.528
19	19	0.389
2	2	0.832
20	20	0.5
21	21	0.939
22	22	0.56
23	23	0.596
24	24	0.388
25	25	0.11
26	26	0.932
27	27	0.0991
28	28	0.363
29	29	0.0179
3	3	0.19
30	30	0.464
31	31	0.587
32	32	0.0782
33	33	0.258
34	34	0.918
35	35	0.0725
36	36	0.143
37	37	0.0764
38	38	0.513
39	39	0.541
4	4	0.227
40	40	0.587
41	41	0.051
42	42	0.115
43	43	0.199
44	44	0.821
45	45	0.813
46	46	0.382
47	47	0.481
48	48	0.715
49	49	0.278
5	5	0.43
50	50	0.697
51	51	0.266
52	52	0.757
53	53	0.603
54	54	0.824
55	55	0.449
56	56	0.707
57	57	0.938
58	58	0.0361
59	59	0.457
6	6	0.955
60	60	0.193
61	61	0.146
62	62	0.022
63	63	0.913
64	64	0.553
65	65	0.647
66	66	0.68
67	67	0.142
68	68	0.445
69	69	0.581
7	7	0.127
70	70	0.309
71	71	0.0691
72	72	0.219
73	73	0.258
74	74	0.459
75	75	0.123
76	76	0.577
77	77	0.699
78	78	0.0676
79	79	0.817
8	8	0.605
80	80	0.0462
81	81	0.433
82	82	0.239
83	83	0.297
84	84	0.269
85	85	0.392
86	86	0.0257
87	87	0.0575
88	88	0.286
89	89	0.709
9	9	0.414
90	90	0.104
91	91	0.899
92	92	0.633
93	93	0.821
94	94	0.138
95	95	0.014
96	96	0.806
97	97	0.931
98	98	0.112
99	99	4.0805e-4

de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown. Analyst:NA library id: CNhs12196

FANTOM5 (FF) ontology

Direct parent terms

is_a relathionship
EFO:0002091 biological replicate
FF:0000045 human plasmacytoid dendritic cell sample

Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship Analyst: Hideya Kawaji link to source data data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000988 (hematopoietic cell)
0000548 (animal cell)
0002371 (somatic cell)
0000219 (motile cell)
0000738 (leukocyte)
0000255 (eukaryotic cell)
0000451 (dendritic cell)
0000784 (plasmacytoid dendritic cell)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000045 (human plasmacytoid dendritic cell sample)

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship Analyst: Hideya Kawaji link to source data data
CL:0000134 (mesenchymal cell)

@@ Line 13: / Line 13: @@
 |def=
 |expression_enrichment_score=chr16:85932760..85932775,+!p1@IRF8!3.27!1868.14!IRF8;;chr6:391743..391759,+!p1@IRF4!3.22!1641.05!IRF4;;chr19:50922187..50922204,+!p1@SPIB!2.51!319.17!SPIB;;chr2:68592406..68592424,+!p1@PLEK!2.43!269.41!PLEK;;chr8:135614120..135614149,-!p5@ZFAT!2.04!108.11!ZFAT;;chr8:135613849..135613883,-!p7@ZFAT!1.98!94.95!ZFAT;;chr11:615942..615957,-!p1@IRF7!1.92!729.29!IRF7;;chr2:68592394..68592405,+!p2@PLEK!1.92!82.37!PLEK;;chr18:53257001..53257015,-!p5@TCF4!1.91!133.27!TCF4;;chr7:50344251..50344288,+!p3@IKZF1!1.91!80.65!IKZF1;;chr8:135614084..135614119,-!p4@ZFAT!1.90!77.79!ZFAT;;chr2:100759037..100759058,-!p2@AFF3!1.89!77.22!AFF3;;chr2:100759010..100759035,-!p1@AFF3!1.89!76.65!AFF3;;chr16:85936412..85936431,+!p2@IRF8!1.86!71.50!IRF8;;chr7:50343634..50343717,+!p2@IKZF1!1.82!64.64!IKZF1;;chr7:50344289..50344323,+!p1@IKZF1!1.76!56.63!IKZF1;;chr11:47400078..47400106,-!p1@SPI1!1.73!52.62!SPI1;;chr6:45390300..45390335,+!p4@RUNX2!1.69!73.79!RUNX2;;chr1:244214577..244214593,+!p1@ZNF238!1.66!44.62!ZNF238;;chr19:54041669..54041697,+!p2@ZNF331!1.64!42.90!ZNF331;;chr19:12721790..12721810,+!p2@ZNF791!1.62!107.54!ZNF791;;chr6:45390599..45390662,+!p11@RUNX2!1.62!49.19!RUNX2;;chr18:53255839..53255854,-!p13@TCF4!1.59!44.62!TCF4;;chr19:36391434..36391450,-!p1@NFKBID!1.58!70.36!NFKBID;;chr2:60780607..60780624,-!p2@BCL11A!1.56!104.10!BCL11A;;chr6:45390269..45390298,+!p5@RUNX2!1.54!54.34!RUNX2;;chr5:142782823..142782854,-!p3@NR3C1!1.52!45.76!NR3C1;;chr18:53253297..53253322,-!p30@TCF4!1.52!32.03!TCF4;;chr5:142814241..142814278,-!p12@NR3C1!1.51!31.46!NR3C1;;chr3:57260377..57260399,-!p2@HESX1!1.49!29.74!HESX1;;chr9:102584262..102584276,+!p1@NR4A3!1.47!62.35!NR4A3;;chr6:135502408..135502459,+!p2@MYB!1.45!31.46!MYB;;chr8:135613895..135613921,-!p8@ZFAT!1.45!27.46!ZFAT;;chr6:135502501..135502546,+!p1@MYB!1.44!31.46!MYB;;chr19:54058073..54058088,+!p1@ZNF331!1.44!26.31!ZNF331;;chr18:52989565..52989623,-!p9@TCF4!1.43!32.60!TCF4;;chr12:111537227..111537239,+!p7@CUX2!1.43!25.74!CUX2;;chr10:104154415..104154434,+!p5@NFKB2!1.38!22.88!NFKB2;;chr2:60781201..60781258,-!p3@BCL11A!1.38!22.88!BCL11A;;chr5:88178983..88179012,-!p1@MEF2C!1.36!162.45!MEF2C;;chrY:21906594..21906622,-!p1@KDM5D!1.36!21.74!KDM5D;;chr1:244214655..244214666,+!p7@ZNF238!1.35!21.16!ZNF238;;chr2:145277640..145277771,-!p1@ZEB2!1.33!261.97!ZEB2;;chr15:31619140..31619152,+!p11@KLF13!1.32!20.02!KLF13;;chr1:40367668..40367684,-!p2@MYCL1!1.30!18.88!MYCL1;;chr18:53255415..53255491,-!p1@TCF4!1.28!149.86!TCF4;;chr7:104654690..104654704,+!p2@MLL5!1.28!35.46!MLL5;;chr6:44233252..44233296,-!p1@NFKBIE!1.27!171.03!NFKBIE;;chr6:12009042..12009092,+!p6@HIVEP1!1.27!22.88!HIVEP1;;chr1:92949331..92949377,-!p2@GFI1!1.27!17.73!GFI1;;chrX:129244430..129244442,-!p5@ELF4!1.27!17.73!ELF4;;chr10:35484053..35484076,+!p1@CREM!1.26!42.90!CREM;;chr16:85936539..85936562,+!p3@IRF8!1.26!17.16!IRF8;;chr8:135614159..135614170,-!p13@ZFAT!1.25!16.59!ZFAT;;chr2:61108695..61108753,+!p1@REL!1.23!107.54!REL;;chr2:100758991..100759009,-!p3@AFF3!1.23!16.02!AFF3;;chr1:244214611..244214624,+!p4@ZNF238!1.23!16.02!ZNF238;;chr14:35873947..35873965,-!p1@NFKBIA!1.22!954.09!NFKBIA;;chr1:156470515..156470542,-!p2@MEF2D!1.22!79.51!MEF2D;;chr2:157189180..157189290,-!p1@NR4A2!1.21!78.94!NR4A2;;chr9:117150254..117150271,-!p1@AKNA!1.21!41.18!AKNA;;chr1:25256756..25256774,-!p1@RUNX3!1.21!28.60!RUNX3;;chr19:50432132..50432217,+!p2@ATF5!1.21!18.30!ATF5;;chr10:104155480..104155534,+!p2@NFKB2!1.20!94.38!NFKB2;;chr1:40367530..40367597,-!p1@MYCL1!1.20!26.88!MYCL1;;chr2:192015701..192015743,-!p1@STAT4!1.19!20.02!STAT4;;chrX:106960180..106960197,-!p2@TSC22D3!1.18!53.20!TSC22D3;;chr7:104654718..104654741,+!p3@MLL5!1.18!20.59!MLL5;;chr1:92950138..92950159,-!p4@GFI1!1.18!14.30!GFI1;;chr1:168195229..168195294,+!p1@SFT2D2,p1@TBX19!1.17!608.60!TBX19;;chr9:102584241..102584261,+!p4@NR4A3!1.17!21.16!NR4A3;;chr6:144385698..144385742,-!p2@PLAGL1!1.17!16.59!PLAGL1;;chr18:53257027..53257052,-!p3@TCF4!1.16!53.20!TCF4;;chr14:74226961..74227020,-!p1@C14orf43!1.15!86.94!C14orf43;;chr3:39195075..39195088,-!p1@CSRNP1!1.15!82.37!CSRNP1;;chr6:106534192..106534224,+!p1@PRDM1!1.15!37.18!PRDM1;;chr11:615570..615721,-!p2@IRF7!1.15!25.74!IRF7;;chr15:31619200..31619211,+!p12@KLF13!1.15!14.30!KLF13;;chr13:72441315..72441454,-!p1@DACH1!1.14!25.74!DACH1;;chr4:106068026..106068084,+!p1@TET2!1.13!111.54!TET2;;chr18:52989031..52989079,-!p2@TCF4!1.13!29.17!TCF4;;chr8:103668114..103668134,-!p5@KLF10!1.13!12.58!KLF10;;chr9:102584278..102584285,+!p5@NR4A3!1.13!12.58!NR4A3;;chr15:74833584..74833626,+!p1@ARID3B!1.12!28.60!ARID3B;;chr7:127032330..127032356,-!p3@ZNF800!1.12!15.44!ZNF800;;chr2:97202480..97202499,+!p1@ARID5A!1.11!118.97!ARID5A;;chr18:52989001..52989030,-!p10@TCF4!1.11!13.16!TCF4;;chr14:64761083..64761101,-!p1@ESR2!1.11!12.01!ESR2;;chr14:64971288..64971316,-!p2@ZBTB25!1.09!34.89!ZBTB25;;chr16:85936600..85936623,+!p4@IRF8!1.09!11.44!IRF8;;chr5:142782862..142782881,-!p11@NR3C1!1.09!11.44!NR3C1;;chr4:140005443..140005527,-!p2@ELF2!1.08!65.21!ELF2;;chr10:43932296..43932360,+!p1@ZNF487P!1.07!22.88!ZNF487P;;chr12:11802753..11802834,+!p2@ETV6!1.06!52.05!ETV6;;chr19:45252008..45252024,+!p2@BCL3!1.06!34.89!BCL3;;chr2:60780753..60780800,-!p1@BCL11A!1.05!50.34!BCL11A;;chr2:24714729..24714761,+!p1@NCOA1!1.05!10.30!NCOA1;;chr7:50343895..50343936,+!p5@IKZF1!1.05!10.30!IKZF1;;chr18:53253077..53253100,-!p46@TCF4!1.05!10.30!TCF4;;chr2:60778035..60778060,-!p4@BCL11A!1.04!12.01!BCL11A;;chr8:86089627..86089653,+!p3@E2F5!1.04!11.44!E2F5;;chr6:45390442..45390479,+!p8@RUNX2!1.03!14.87!RUNX2;;chr6:45390343..45390388,+!p10@RUNX2!1.03!13.16!RUNX2;;chr7:127032363..127032382,-!p6@ZNF800!1.03!10.87!ZNF800;;chr19:54041645..54041661,+!p5@ZNF331!1.03!9.72!ZNF331;;chrY:2803415..2803468,+!p1@ZFY!1.03!9.72!ZFY;;chr4:103422499..103422632,+!p1@NFKB1!1.02!201.91!NFKB1;;chr3:18486354..18486377,-!p2@SATB1!1.02!12.01!SATB1;;chr6:106534230..106534254,+!p2@PRDM1!1.01!23.45!PRDM1;;chr8:123793988..123794016,+!p1@ZHX2!1.01!16.59!ZHX2;;chr7:115799916..115799932,-!p6@TFEC!1.01!9.15!TFEC;;chr18:53253323..53253359,-!p19@TCF4!1.01!9.15!TCF4;;chr10:94449703..94449718,+!p1@HHEX!1.00!35.46!HHEX;;chr3:5021113..5021180,+!p1@BHLHE40!0.99!622.90!BHLHE40;;chr13:41593425..41593480,-!p1@ELF1!0.99!57.20!ELF1;;chr2:192015750..192015793,-!p2@STAT4!0.99!12.01!STAT4;;chr14:64971461..64971542,+!p1@ZBTB1!0.98!175.03!ZBTB1;;chrX:106960221..106960236,-!p3@TSC22D3!0.98!24.02!TSC22D3;;chr1:91487836..91487854,-!p3@ZNF644!0.98!20.02!ZNF644;;chr17:46620898..46620927,-!p9@HOXB2!0.98!10.30!HOXB2;;chr6:45390399..45390418,+!p15@RUNX2!0.98!8.58!RUNX2;;chr1:157108728..157108744,-!p5@ETV3!0.98!8.58!ETV3;;chr9:102584159..102584174,+!p2@NR4A3!0.97!15.44!NR4A3;;chr15:31619119..31619131,+!p14@KLF13!0.97!9.15!KLF13;;chr6:151712673..151712709,-!p1@ZBTB2!0.96!47.48!ZBTB2;;chr2:61108650..61108687,+!p2@REL!0.96!40.61!REL;;chr3:5021191..5021202,+!p3@BHLHE40!0.96!22.31!BHLHE40;;chr2:60778062..60778075,-!p6@BCL11A!0.95!8.01!BCL11A;;chr18:53255323..53255332,-!p31@TCF4!0.95!8.01!TCF4;;chr12:54778471..54778528,-!p1@ZNF385A!0.95!8.01!ZNF385A;;chr13:41593405..41593416,-!p9@ELF1!0.95!8.01!ELF1;;chr2:231084659..231084721,-!p1@SP110!0.94!187.04!SP110;;chr6:45389791..45389832,+!p3@RUNX2!0.94!20.02!RUNX2;;chr1:45805693..45805718,+!p3@TOE1!0.94!17.16!TOE1;;chr12:52445218..52445237,+!p1@NR4A1!0.93!97.81!NR4A1;;chr10:94449675..94449694,+!p2@HHEX!0.93!20.59!HHEX;;chr13:72441074..72441172,-!p2@DACH1!0.93!7.44!DACH1;;chr2:60780730..60780742,-!p5@BCL11A!0.93!7.44!BCL11A;;chr18:53256971..53256984,-!p26@TCF4!0.93!7.44!TCF4;;chr2:169312725..169312810,+!p1@CERS6!0.92!183.61!CERS6;;chr19:45971246..45971265,+!p1@FOSB!0.92!141.28!FOSB;;chr1:37940170..37940190,+!p1@ZC3H12A!0.92!93.81!ZC3H12A;;chr4:185395590..185395627,-!p3@IRF2!0.92!9.15!IRF2;;chr7:127032296..127032317,-!p4@ZNF800!0.92!8.58!ZNF800;;chr1:10754477..10754517,-!p1@CASZ1!0.91!12.01!CASZ1;;chr6:12008986..12009016,+!p3@HIVEP1!0.90!22.31!HIVEP1;;chrX:84499081..84499115,+!p2@ZNF711!0.90!10.30!ZNF711;;chr5:142814316..142814335,-!p18@NR3C1!0.90!6.86!NR3C1;;chr7:115670804..115670825,-!p1@TFEC!0.90!6.86!TFEC;;chr7:149470297..149470337,-!p3@ZNF467!0.90!6.86!ZNF467;;chr8:135614204..135614209,-!p22@ZFAT!0.90!6.86!ZFAT;;chr8:135652051..135652065,-!p21@ZFAT!0.90!6.86!ZFAT;;chr19:58740449..58740456,+!p3@ZNF544!0.90!6.86!ZNF544;;chr1:40367692..40367703,-!p3@MYCL1!0.90!6.86!MYCL1;;chr11:47400062..47400077,-!p2@SPI1!0.90!6.86!SPI1;;chr2:60780546..60780555,-!p10@BCL11A!0.90!6.86!BCL11A;;chr8:103667935..103667960,-!p1@KLF10!0.89!316.89!KLF10;;chr19:12902289..12902307,+!p1@JUNB!0.88!1576.99!JUNB;;chr2:8822176..8822196,+!p1@ID2!0.88!966.67!ID2;;chr5:131826457..131826514,-!p1@IRF1!0.88!273.41!IRF1;;chr2:48541789..48541874,+!p1@FOXN2!0.88!155.58!FOXN2;;chr6:12011943..12012015,+!p2@HIVEP1!0.88!22.31!HIVEP1;;chr1:156470494..156470505,-!p3@MEF2D!0.88!9.72!MEF2D;;chr1:153895251..153895342,-!p2@GATAD2B!0.87!24.60!GATAD2B;;chr6:45296048..45296082,+!p1@RUNX2!0.87!7.44!RUNX2;;chr9:110252035..110252057,-!p1@KLF4!0.86!106.96!KLF4;;chr5:88179017..88179046,-!p2@MEF2C!0.86!26.31!MEF2C;;chr2:61108771..61108789,+!p4@REL!0.86!9.72!REL;;chr2:61108808..61108821,+!p3@REL!0.86!8.01!REL;;chr2:60780516..60780526,-!p11@BCL11A!0.86!6.29!BCL11A;;chrY:21906761..21906810,-!p2@KDM5D!0.86!6.29!KDM5D;;chr18:53253112..53253124,-!p51@TCF4!0.86!6.29!TCF4;;chr2:174828545..174828644,-!p1@SP3!0.85!98.38!SP3;;chr3:48282587..48282603,+!p1@ZNF589!0.85!28.60!ZNF589;;chr9:102584128..102584144,+!p3@NR4A3!0.85!12.01!NR4A3;;chr2:208031542..208031595,-!p2@KLF7!0.84!44.62!KLF7;;chr19:45579725..45579743,-!p1@ZNF296!0.84!28.60!ZNF296;;chr2:208394817..208394834,+!p3@CREB1!0.84!25.17!CREB1;;chr19:45504688..45504782,+!p1@RELB!0.83!37.75!RELB;;chr6:44233297..44233330,-!p2@NFKBIE!0.83!16.02!NFKBIE;;chr15:90544532..90544563,+!p1@ZNF710!0.83!12.01!ZNF710;;chr8:81397820..81397836,+!p2@ZBTB10!0.83!7.44!ZBTB10;;chr2:61108878..61108891,+!p5@REL!0.83!5.72!REL;;chr20:52226313..52226350,-!p3@ZNF217!0.83!5.72!ZNF217;;chr20:56195474..56195506,-!p1@ZBP1!0.83!5.72!ZBP1;;chr13:72440434..7244047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chr2:28615716..28615733,+!p1@FOSL2!0.27!80.65!FOSL2;;chr8:41909496..41909512,-!p1@KAT6A!0.27!50.34!KAT6A;;chr6:134274354..134274371,+!p1@TBPL1!0.27!44.04!TBPL1;;chr11:66886717..66886762,+!p1@KDM2A!0.27!33.75!KDM2A;;chr19:19932513..19932569,-!p1@ZNF506!0.27!31.46!ZNF506;;chr7:28220354..28220441,-!p1@JAZF1!0.27!25.74!JAZF1;;chr2:75937994..75938054,-!p1@GCFC2!0.27!23.45!GCFC2;;chr19:52873166..52873208,+!p1@ZNF880!0.27!22.88!ZNF880;;chr19:9695195..9695221,-!p2@ZNF121!0.27!18.88!ZNF121;;chr19:9251052..9251079,+!p2@ZNF317!0.27!16.02!ZNF317;;chr8:124286495..124286548,-!p1@ZHX1!0.27!16.02!ZHX1;;chr1:167190091..167190156,+!p1@POU2F1!0.27!12.58!POU2F1;;chr14:89883509..89883587,-!p2@FOXN3!0.27!10.87!FOXN3;;chr19:24269981..24270007,+!p2@ZNF254!0.27!10.30!ZNF254;;chr1:38325256..38325280,-!p1@MTF1!0.27!9.72!MTF1;;chr14:100705335..100705360,+!p4@YY1!0.27!9.15!YY1;;chr10:43134001..43134026,-!p1@ZNF33B!0.27!6.86!ZNF33B;;chr16:3493446..3493510,-!p1@ZNF597!0.27!6.86!ZNF597;;chr19:58071201..58071238,-!p1@ZNF550!0.27!5.15!ZNF550;;chr16:29817433..29817468,+!p8@MAZ!0.27!4.58!MAZ;;chr21:36259445..36259519,-!p4@RUNX1!0.27!4.00!RUNX1;;chr15:41913412..41913456,+!p3@MGA!0.27!2.86!MGA;;chr15:57025823..57025832,-!p3@ZNF280D!0.27!1.72!ZNF280D;;chr16:30583169..30583200,-!p2@ZNF688!0.27!1.72!ZNF688;;chr19:13213662..13213686,-!p1@LYL1!0.27!1.72!LYL1;;chr19:53039233..53039247,+!p2@ZNF808!0.27!1.72!ZNF808;;chr4:124361..124372,+!p3@ZNF718!0.27!1.72!ZNF718;;chr4:87928105..87928126,+!p13@AFF1!0.27!1.72!AFF1;;chr6:15245677..15245723,+!p6@JARID2!0.27!1.72!JARID2;;chr11:67007535..67007546,+!p7@KDM2A!0.27!1.72!KDM2A;;chr15:77197753..77197772,-!p2@SCAPER!0.27!1.14!SCAPER;;chr1:211432810..211432817,+!p9@RCOR3!0.27!1.14!RCOR3;;chr17:30677160..30677200,+!p1@ZNF207!0.26!240.81!ZNF207;;chr5:138629417..138629446,+!p1@MATR3!0.26!152.15!MATR3;;chr5:150080543..150080664,-!p1@RBM22!0.26!70.93!RBM22;;chr12:57505121..57505179,-!p1@STAT6!0.26!64.06!STAT6;;chr4:38665810..38665827,+!p1@KLF3!0.26!23.45!KLF3;;chr3:141747459..141747475,-!p1@TFDP2!0.26!13.16!TFDP2;;chr17:33288552..33288598,+!p1@ZNF830!0.26!12.01!ZNF830;;chr3:178789522..178789564,-!p2@ZMAT3!0.26!11.44!ZMAT3;;chr19:44716678..44716732,+!p1@ZNF227!0.26!10.87!ZNF227;;chr19:35759473..35759521,+!p3@USF2!0.26!9.15!USF2;;chr9:35732561..35732587,+!p3@CREB3!0.26!6.29!CREB3;;chr9:129622904..129622956,+!p1@ZBTB34!0.26!5.15!ZBTB34;;chr2:208394704..208394715,+!p4@CREB1!0.26!4.58!CREB1;;chr3:126194815..126194848,-!p2@ZXDC!0.26!2.86!ZXDC;;chr4:87928307..87928321,+!p8@AFF1!0.26!2.86!AFF1;;chr7:148959065..148959126,+!p2@ZNF783!0.26!2.86!ZNF783;;chr9:3526360..3526421,-!p5@RFX3!0.26!2.29!RFX3;;chr8:145159277..145159282,+!p7@MAF1!0.26!1.72!MAF1;;chr2:70167296..70167306,+!p3@MXD1!0.26!1.72!MXD1;;chr10:35415735..35415756,+!p9@CREM!0.26!1.72!CREM;;chr15:57211634..57211657,+!p5@TCF12!0.26!1.72!TCF12;;chr18:72922858..72922897,+!p4@TSHZ1!0.26!1.14!TSHZ1;;chr4:2264015..2264041,-!p4@MXD4!0.26!1.14!MXD4;;chr10:8096772..8096787,+!p2@GATA3!0.26!1.14!GATA3;;chr19:58193388..58193411,+!p2@ZNF551,p4@ZNF776!0.26!1.14!ZNF551;;chr1:6845598..6845601,+!p5@CAMTA1!0.26!1.14!CAMTA1;;chr4:467892..467963,-!p1@ABCA11P,p1@ZNF721!0.25!40.61!ZNF721;;chr3:169491171..169491205,+!p1@MYNN!0.25!27.46!MYNN;;chr10:38299546..38299686,+!p1@ZNF33A!0.25!22.88!ZNF33A;;chr19:57791328..57791377,+!p2@ZNF460!0.25!18.88!ZNF460;;chr5:132299210..132299228,-!p3@AFF4!0.25!18.30!AFF4;;chr2:85198369..85198483,+!p2@KCMF1!0.25!18.30!KCMF1;;chr7:129251531..129251601,+!p1@NRF1!0.25!17.16!NRF1;;chr2:70142189..70142223,+!p2@MXD1!0.25!10.87!MXD1;;chr19:22018966..22019001,-!p1@ZNF43!0.25!8.58!ZNF43;;chrX:70503529..70503549,+!p2@NONO!0.25!8.01!NONO;;chr9:37465399..37465454,-!p1@ZBTB5!0.25!6.29!ZBTB5;;chr6:35227282..35227330,+!p2@ZNF76!0.25!5.15!ZNF76;;chr7:99156314..99156372,+!p4@ZNF655!0.25!4.58!ZNF655;;chr14:45722287..45722308,-!p2@MIS18BP1!0.25!3.43!MIS18BP1;;
+|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000222;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000234;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000451;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000542;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000738;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000784;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000988;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002193;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002390;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002405
 |ffid_belonging_in_development=CL:0000134
 |fonse_cell_line=

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FF:11309-117C4: Difference between revisions

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Revision as of 15:02, 15 May 2017

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	Mozilla Cavendish skin modified by DaSch for the Web Community Wiki GitHub project page – Report a bug – Skin version: 2.6.0