FFCP PHASE2:Mm9::chr1:137737248..137737273,+: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
(Created page with "{{FFCP |DHSsupport=NA |DPIdataset=NA |EntrezGene=entrezgene:21956 |HGNC= |MCL_coexpression_id=2 |TSSclassifier=NA |UniProt=uniprot:P50752,uniprot:Q54AB6,uniprot:Q6P3Z7 |associ...") |
No edit summary |
||
| Line 2: | Line 2: | ||
|DHSsupport=NA | |DHSsupport=NA | ||
|DPIdataset=NA | |DPIdataset=NA | ||
|EntrezGene= | |EntrezGene=21956 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2 | |MCL_coexpression_id=2 | ||
|TSSclassifier=NA | |TSSclassifier=NA | ||
|UniProt= | |UniProt=P50752,Q54AB6,Q6P3Z7 | ||
|association_with_transcript=-164bp_to_NM_001130176,uc011wsr.1_5end | |association_with_transcript=-164bp_to_NM_001130176,uc011wsr.1_5end | ||
|cluster_id=chr1:137737248..137737273,+ | |cluster_id=chr1:137737248..137737273,+ | ||
Latest revision as of 10:59, 26 September 2015
| Short description: | p3@Tnnt2 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_3_at_Tnnt2_5end |
| Coexpression cluster: | MCL_coexpression_mm9:2 |
| Association with transcript: | -164bp_to_NM_001130176, uc011wsr.1_5end |
| EntrezGene: | Tnnt2 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p3@Tnnt2 |
|---|
0
5
10
15
20
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| raphe nuclei neuron | 4.84e-10 | 3 |
| neuron of the substantia nigra | 1.41e-09 | 3 |
Showing 1 to 2 of 2 entries
| Ontology term | p-value | n |
|---|---|---|
| occipital lobe | 5.65e-32 | 10 |
| visual cortex | 5.65e-32 | 10 |
| neocortex | 5.65e-32 | 10 |
| regional part of nervous system | 1.72e-30 | 54 |
| brain | 1.64e-29 | 47 |
| future brain | 1.64e-29 | 47 |
| regional part of brain | 2.02e-27 | 46 |
| neural tube | 2.03e-26 | 52 |
| neural rod | 2.03e-26 | 52 |
| future spinal cord | 2.03e-26 | 52 |
Showing 1 to 10 of 51 entries
