FFCP PHASE2:Mm9::chr1:168184226..168184287,+: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
(Created page with "{{FFCP |DHSsupport=NA |DPIdataset=NA |EntrezGene=entrezgene:100039795 |HGNC= |TSSclassifier=NA |UniProt=uniprot:E9Q9U5,uniprot:B5TVM2,uniprot:B5TVM4,uniprot:B5TVM5,uniprot:B5T...") |
No edit summary |
||
| Line 2: | Line 2: | ||
|DHSsupport=NA | |DHSsupport=NA | ||
|DPIdataset=NA | |DPIdataset=NA | ||
|EntrezGene= | |EntrezGene=100039795 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |TSSclassifier=NA | ||
|UniProt= | |UniProt=E9Q9U5,B5TVM2,B5TVM4,B5TVM5,B5TVM9 | ||
|association_with_transcript=0bp_to_ENSMUST00000111416,NM_001164528,uc011wvd.1,uc011wve.1,uc011wvf.1,uc011wvg.1,uc011wvh.1,uc011wvi.1,uc011wvj.1_5end | |association_with_transcript=0bp_to_ENSMUST00000111416,NM_001164528,uc011wvd.1,uc011wve.1,uc011wvf.1,uc011wvg.1,uc011wvh.1,uc011wvi.1,uc011wvj.1_5end | ||
|cluster_id=chr1:168184226..168184287,+ | |cluster_id=chr1:168184226..168184287,+ | ||
Latest revision as of 17:38, 26 September 2015
| Short description: | p2@Ildr2 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_2_at_Ildr2_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 0bp_to_ENSMUST00000111416, NM_001164528, uc011wvd.1, uc011wve.1, uc011wvf.1, uc011wvg.1, uc011wvh.1, uc011wvi.1, uc011wvj.1_5end |
| EntrezGene: | Ildr2 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p2@Ildr2 |
|---|
0
5
10
15
20
25
30
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| neural cell | 2.51e-11 | 43 |
| electrically responsive cell | 3.36e-11 | 39 |
| electrically active cell | 3.36e-11 | 39 |
| ectodermal cell | 9.48e-11 | 44 |
| neurectodermal cell | 9.48e-11 | 44 |
| CNS neuron (sensu Vertebrata) | 9.92e-09 | 23 |
| neuroblast (sensu Vertebrata) | 9.92e-09 | 23 |
| neuron | 1.21e-08 | 33 |
| neuronal stem cell | 1.21e-08 | 33 |
| neuroblast | 1.21e-08 | 33 |
Showing 1 to 10 of 12 entries
| Ontology term | p-value | n |
|---|---|---|
| central nervous system | 1.64e-25 | 73 |
| ectoderm-derived structure | 2.65e-24 | 95 |
| ectoderm | 2.65e-24 | 95 |
| presumptive ectoderm | 2.65e-24 | 95 |
| nervous system | 4.62e-24 | 75 |
| neurectoderm | 1.20e-22 | 64 |
| neural plate | 1.20e-22 | 64 |
| presumptive neural plate | 1.20e-22 | 64 |
| regional part of nervous system | 5.41e-20 | 54 |
| pre-chordal neural plate | 1.47e-18 | 49 |
Showing 1 to 10 of 29 entries
