FFCP PHASE2:Mm9::chr4:154865462..154865520,+: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=NA |DPIdataset=NA |EntrezGene=entrezgene:14688 |HGNC= |MCL_coexpression_id=1361 |TSSclassifier=NA |UniProt=uniprot:P62874,uniprot:Q3TQ70 |association_with_t...") |
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|DHSsupport=NA | |DHSsupport=NA | ||
|DPIdataset=NA | |DPIdataset=NA | ||
|EntrezGene= | |EntrezGene=14688 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1361 | |MCL_coexpression_id=1361 | ||
|TSSclassifier=NA | |TSSclassifier=NA | ||
|UniProt= | |UniProt=P62874,Q3TQ70 | ||
|association_with_transcript=0bp_to_ENSMUST00000030940,ENSMUST00000105616,ENSMUST00000165335,NM_001160016,NM_001160017,NM_008142,uc008wdp.2,uc008wdq.2,uc008wdr.2_5end | |association_with_transcript=0bp_to_ENSMUST00000030940,ENSMUST00000105616,ENSMUST00000165335,NM_001160016,NM_001160017,NM_008142,uc008wdp.2,uc008wdq.2,uc008wdr.2_5end | ||
|cluster_id=chr4:154865462..154865520,+ | |cluster_id=chr4:154865462..154865520,+ |
Latest revision as of 19:55, 26 September 2015
Short description: | p1@Gnb1 |
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Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Gnb1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1361 |
Association with transcript: | 0bp_to_ENSMUST00000030940, ENSMUST00000105616, ENSMUST00000165335, NM_001160016, NM_001160017, NM_008142, uc008wdp.2, uc008wdq.2, uc008wdr.2_5end |
EntrezGene: | Gnb1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p1@Gnb1 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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ectodermal cell | 2.50e-14 | 44 |
neurectodermal cell | 2.50e-14 | 44 |
neural cell | 4.18e-14 | 43 |
CNS neuron (sensu Vertebrata) | 1.21e-13 | 23 |
neuroblast (sensu Vertebrata) | 1.21e-13 | 23 |
neuron | 1.01e-12 | 33 |
neuronal stem cell | 1.01e-12 | 33 |
neuroblast | 1.01e-12 | 33 |
electrically signaling cell | 1.01e-12 | 33 |
embryonic cell | 1.24e-12 | 70 |
Showing 1 to 10 of 12 entries
Ontology term | p-value | n |
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nervous system | 2.05e-24 | 75 |
central nervous system | 1.86e-23 | 73 |
regional part of nervous system | 2.66e-20 | 54 |
neural tube | 5.38e-19 | 52 |
neural rod | 5.38e-19 | 52 |
future spinal cord | 5.38e-19 | 52 |
neural keel | 5.38e-19 | 52 |
ectoderm-derived structure | 1.10e-16 | 95 |
ectoderm | 1.10e-16 | 95 |
presumptive ectoderm | 1.10e-16 | 95 |
Showing 1 to 10 of 33 entries