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|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.obo.owl;;IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
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Revision as of 17:14, 15 June 2012

Name:blood vessel
Definition:"A vessel through which blood circulates in the body." [BTO:0001102, Wikipedia:Blood_vessel]
Xrefs:
links:

AAO:0011004
AEO:0000207
BTO:0001102
EFO:0000817
EHDAA:240
EHDAA2:0003252
FMA:50722
FMA:63183
GAID:169
[ 200px-Circulatory_System_en.svg.png 200px-Circulatory_System_en.svg.png]
MA:0000060
MAT:0000393
MESH:A.07.231
ncithesaurus:Blood_Vessel
NIF_GrossAnatomy:nlx_anat_090901
OpenCyc:Mx4rvVjxlpwpEbGdrcN5Y29ycA
SCTID:361097006
VHOG:0001250
XAO:0001011

ZFA:0005314
Synonyms: "region of vascular tree organ" EXACT [FMA:50722]
"vascular tree organ region" EXACT [FMA:50722]
Comments:note that FMA:63183 Blood vessel is categorized as 'general anatomical term'. Suggestion to map to region of vascular tree from Terry H at JAX. Taxon notes: annelids have blood vessels, but this class is not applicable to annelids.
Alt_id: UBERON:FMA_63183-XAO_0001011
Subset: uberon_slim
vertebrate_core

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0000055(vessel),UBERON:0004120(mesoderm-derived structure),UBERON:0007500(epithelial tube open at both ends)
develops_from:UBERON:0004872(splanchnic layer of lateral plate mesoderm),UBERON:0006965(vascular cord)
part_of:UBERON:0004537(blood vasculature)



Children

is a:UBERON:0001982 (capillary),UBERON:0003496 (head blood vessel),UBERON:0003504 (respiratory system blood vessel),UBERON:0003509 (arterial blood vessel),UBERON:0003513 (trunk blood vessel),UBERON:0003920 (venous blood vessel),UBERON:0010260 (umbilical blood vessel),UBERON:0013768 (great vessel of heart),UBERON:0014907 (intersomitic vessel)
disjoint from:UBERON:0001473 (lymphatic vessel)
part of:UBERON:0004237 (blood vessel smooth muscle),UBERON:0004638 (blood vessel endothelium),UBERON:0004797 (blood vessel layer)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology

Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0001981 (blood vessel), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
4.37e-99FFCP PHASE2:Hg19::chr8:55370720..55370733,+#_3e8a5a086d7e7918dd97162506c10e71p2@SOX17
4.37e-99FFCP PHASE1:Hg19::chr8:55370720..55370733,+#_3e8a5a086d7e7918dd97162506c10e71p2@SOX17
3.03e-83FFCP PHASE2:Hg19::chr12:96830430..96830450,+#_a770e5c797641adf386b1670841d16b8p@chr12:96830430..96830450, +
3.03e-83FFCP PHASE1:Hg19::chr12:96830430..96830450,+#_a770e5c797641adf386b1670841d16b8p@chr12:96830430..96830450, +
9.39e-72FFCP PHASE2:Hg19::chr4:70653649..70653665,-#_c9432a70b6146e1b8f4a4eb0de918b29p4@SULT1B1
9.39e-72FFCP PHASE1:Hg19::chr4:70653649..70653665,-#_c9432a70b6146e1b8f4a4eb0de918b29p4@SULT1B1
1.22e-71FFCP PHASE2:Hg19::chr22:21138343..21138378,+#_8868f2211ff5d8d89a7546417da62ec2p@chr22:21138343..21138378, +
1.22e-71FFCP PHASE1:Hg19::chr22:21138343..21138378,+#_8868f2211ff5d8d89a7546417da62ec2p@chr22:21138343..21138378, +
3.75e-70FFCP PHASE2:Hg19::chr4:70653673..70653688,-#_4338749dd64188c952a1c84f8531d0c4p3@SULT1B1
3.75e-70FFCP PHASE1:Hg19::chr4:70653673..70653688,-#_4338749dd64188c952a1c84f8531d0c4p3@SULT1B1
4.26e-70FFCP PHASE2:Hg19::chr3:30334038..30334060,+#_b40ed51ace82bc49e65969d0d676ca2ep@chr3:30334038..30334060, +
4.26e-70FFCP PHASE1:Hg19::chr3:30334038..30334060,+#_b40ed51ace82bc49e65969d0d676ca2ep@chr3:30334038..30334060, +
1.65e-69FFCP PHASE2:Mm9::chr8:69221163..69221172,+#_121c8abb8dfc0e8305e34dcd09dae0a9p6@Npy1r
1.65e-69FFCP PHASE1:Mm9::chr8:69221163..69221172,+#_121c8abb8dfc0e8305e34dcd09dae0a9p6@Npy1r
3.42e-69FFCP PHASE1:Hg19::chr7:22629318..22629324,+#_23aa7941ad602d03d27019abba270e32p1@ENST00000439823
3.42e-69FFCP PHASE2:Hg19::chr7:22629318..22629324,+#_23aa7941ad602d03d27019abba270e32p1@ENST00000439823
1.32e-66FFCP PHASE2:Hg19::chr5:54281535..54281547,-#_9b5e9cb92e5c331e61713c4c8cecd501p2@ESM1
1.32e-66FFCP PHASE1:Hg19::chr5:54281535..54281547,-#_9b5e9cb92e5c331e61713c4c8cecd501p2@ESM1
1.79e-66FFCP PHASE1:Hg19::chr1:186946626..186946652,+#_1be6e24ec351086f8fc0673b9fd98266p@chr1:186946626..186946652, +
1.79e-66FFCP PHASE2:Hg19::chr1:186946626..186946652,+#_1be6e24ec351086f8fc0673b9fd98266p@chr1:186946626..186946652, +
2.82e-66FFCP PHASE2:Hg19::chr1:21606171..21606188,-#_336233ef3f4ec0227be52c68bbc2daa9p10@ECE1
2.82e-66FFCP PHASE1:Hg19::chr1:21606171..21606188,-#_336233ef3f4ec0227be52c68bbc2daa9p10@ECE1
1.57e-65FFCP PHASE2:Hg19::chr4:145567563..145567572,+#_9645258003124d1d3ee6919ea248f7cap8@HHIP
1.57e-65FFCP PHASE1:Hg19::chr4:145567563..145567572,+#_9645258003124d1d3ee6919ea248f7cap8@HHIP
4.84e-64FFCP PHASE1:Hg19::chr10:4823096..4823144,-#_a6bf0921059a6a0bd7b1c29f63604ea4p@chr10:4823096..4823144, -
4.84e-64FFCP PHASE2:Hg19::chr10:4823096..4823144,-#_a6bf0921059a6a0bd7b1c29f63604ea4p@chr10:4823096..4823144, -
1.6e-63FFCP PHASE2:Hg19::chr4:145566841..145566862,+#_ea7d1141862327d04f6ffdbba18b775cp10@HHIP
1.6e-63FFCP PHASE1:Hg19::chr4:145566841..145566862,+#_ea7d1141862327d04f6ffdbba18b775cp10@HHIP
1.6e-62FFCP PHASE2:Hg19::chr22:21138313..21138336,+#_5ff35ccb0d458ac0ebc44d3dfb56b656p@chr22:21138313..21138336, +
1.6e-62FFCP PHASE1:Hg19::chr22:21138313..21138336,+#_5ff35ccb0d458ac0ebc44d3dfb56b656p@chr22:21138313..21138336, +
3.56e-60FFCP PHASE2:Hg19::chr11:102668200..102668228,-#_4d5cf2b434d098fd68306cb4a3dd95b4p4@MMP1
3.56e-60FFCP PHASE1:Hg19::chr11:102668200..102668228,-#_4d5cf2b434d098fd68306cb4a3dd95b4p4@MMP1
1.21e-59FFCP PHASE2:Hg19::chr4:145567374..145567390,+#_6d96fefcfbf678aa8a52c08ff9f59166p6@HHIP
1.21e-59FFCP PHASE1:Hg19::chr4:145567374..145567390,+#_6d96fefcfbf678aa8a52c08ff9f59166p6@HHIP
1.43e-59FFCP PHASE2:Hg19::chr5:54281512..54281517,-#_35e799057a8596593c74eedbe97b0ff2p4@ESM1
1.43e-59FFCP PHASE1:Hg19::chr5:54281512..54281517,-#_35e799057a8596593c74eedbe97b0ff2p4@ESM1
7.93e-59FFCP PHASE2:Hg19::chr4:145567426..145567455,+#_462c2dd39df9f107d46e40739470e41fp5@HHIP
7.93e-59FFCP PHASE1:Hg19::chr4:145567426..145567455,+#_462c2dd39df9f107d46e40739470e41fp5@HHIP
1.41e-58FFCP PHASE2:Hg19::chr3:149258838..149258848,-#_91c6e6eb321870f5ba5340ee29f520d3p24@WWTR1
1.41e-58FFCP PHASE1:Hg19::chr3:149258838..149258848,-#_91c6e6eb321870f5ba5340ee29f520d3p24@WWTR1
5.62e-58FFCP PHASE1:Hg19::chr11:86649508..86649546,-#_8953ecbc8cd2dc66422f9a68f3451e8ep@chr11:86649508..86649546, -
5.62e-58FFCP PHASE2:Hg19::chr11:86649508..86649546,-#_8953ecbc8cd2dc66422f9a68f3451e8ep@chr11:86649508..86649546, -
8.9e-57FFCP PHASE1:Hg19::chr4:145567391..145567425,+#_535a3a3563b2441200e0b71eec60ba18p4@HHIP
8.9e-57FFCP PHASE2:Hg19::chr4:145567391..145567425,+#_535a3a3563b2441200e0b71eec60ba18p4@HHIP
4.2e-56FFCP PHASE2:Mm9::chr13:113253807..113253846,+#_c9e7c3a8da27b0300ebfa03c6804ab45p4@Il6st
4.2e-56FFCP PHASE1:Mm9::chr8:69221150..69221161,+#_c9e7c3a8da27b0300ebfa03c6804ab45p5@Npy1r
4.2e-56FFCP PHASE1:Mm9::chr13:113253807..113253846,+#_c9e7c3a8da27b0300ebfa03c6804ab45p4@Il6st
4.2e-56FFCP PHASE2:Mm9::chr8:69221150..69221161,+#_c9e7c3a8da27b0300ebfa03c6804ab45p5@Npy1r
4.77e-56FFCP PHASE2:Hg19::chr4:145567356..145567368,+#_2edf7c53464fc09f564595e410967ea4p7@HHIP
4.77e-56FFCP PHASE1:Hg19::chr4:145567356..145567368,+#_2edf7c53464fc09f564595e410967ea4p7@HHIP
1.07e-55FFCP PHASE2:Hg19::chr11:102667477..102667490,-#_fa0d0aa4467c9c4c18604a8abe751c7ap@chr11:102667477..102667490, -
1.07e-55FFCP PHASE1:Hg19::chr11:102667477..102667490,-#_fa0d0aa4467c9c4c18604a8abe751c7ap@chr11:102667477..102667490, -
1.11e-55FFCP PHASE2:Mm9::chr2:65009852..65009866,-#_b4052e9255129b35fdded4a63dee187cp@chr2:65009852..65009866, -
1.11e-55FFCP PHASE1:Mm9::chr2:65009852..65009866,-#_b4052e9255129b35fdded4a63dee187cp@chr2:65009852..65009866, -
2.0e-55FFCP PHASE1:Hg19::chr11:102668178..102668206,+#_aa802528f0ca7ba4e4b27be15f8da0a7p@chr11:102668178..102668206, +
2.0e-55FFCP PHASE2:Hg19::chr11:102668178..102668206,+#_aa802528f0ca7ba4e4b27be15f8da0a7p@chr11:102668178..102668206, +
9.51e-55FFCP PHASE2:Hg19::chr4:86700590..86700615,+#_48407d0929b8d20570becee4ce161721p@chr4:86700590..86700615, +
9.51e-55FFCP PHASE1:Hg19::chr4:86700590..86700615,+#_48407d0929b8d20570becee4ce161721p@chr4:86700590..86700615, +
1.16e-54FFCP PHASE2:Hg19::chr14:63671393..63671437,+#_8dd7e01318648d21b3ed1d46893c653cp2@RHOJ
1.16e-54FFCP PHASE1:Hg19::chr14:63671393..63671437,+#_8dd7e01318648d21b3ed1d46893c653cp2@RHOJ
5.43e-54FFCP PHASE2:Hg19::chr11:102662162..102662217,-#_802e9aff84af6ffc05d87f90486eac0cp@chr11:102662162..102662217, -
5.43e-54FFCP PHASE1:Hg19::chr11:102662162..102662217,-#_802e9aff84af6ffc05d87f90486eac0cp@chr11:102662162..102662217, -
1.56e-53FFCP PHASE2:Hg19::chr11:102668074..102668126,-#_282839fd0904dbde4849ba05143f1d55p3@MMP1
1.56e-53FFCP PHASE1:Hg19::chr11:102668074..102668126,-#_282839fd0904dbde4849ba05143f1d55p3@MMP1
2.27e-53FFCP PHASE2:Hg19::chr11:128562673..128562716,-#_95cadc2ae5ea8e352c247b04747a0410p@chr11:128562673..128562716, -
2.27e-53FFCP PHASE1:Hg19::chr11:128562673..128562716,-#_95cadc2ae5ea8e352c247b04747a0410p@chr11:128562673..128562716, -
5.18e-53FFCP PHASE2:Hg19::chr4:7846444..7846449,-#_c911daee1304900a7d81c9be8b8d10cfp@chr4:7846444..7846449, -
5.18e-53FFCP PHASE1:Hg19::chr4:7846444..7846449,-#_c911daee1304900a7d81c9be8b8d10cfp@chr4:7846444..7846449, -
1.64e-52FFCP PHASE2:Mm9::chr17:14827154..14827169,-#_a973137d7b0fbb973abfa5d927311696p@chr17:14827154..14827169, -
1.64e-52FFCP PHASE2:Mm9::chr2:178190171..178190178,+#_a973137d7b0fbb973abfa5d927311696p@chr2:178190171..178190178, +
1.64e-52FFCP PHASE2:Mm9::chr17:14802633..14802637,-#_a973137d7b0fbb973abfa5d927311696p@chr17:14802633..14802637, -
1.64e-52FFCP PHASE1:Mm9::chr17:14802633..14802637,-#_a973137d7b0fbb973abfa5d927311696p@chr17:14802633..14802637, -
1.64e-52FFCP PHASE1:Mm9::chr17:14827154..14827169,-#_a973137d7b0fbb973abfa5d927311696p@chr17:14827154..14827169, -
1.64e-52FFCP PHASE1:Mm9::chr2:112043522..112043530,-#_a973137d7b0fbb973abfa5d927311696p@chr2:112043522..112043530, -
1.64e-52FFCP PHASE2:Mm9::chr11:50416871..50416882,+#_a973137d7b0fbb973abfa5d927311696p5@Adamts2
1.64e-52FFCP PHASE1:Mm9::chrX:160839744..160839754,+#_a973137d7b0fbb973abfa5d927311696p@chrX:160839744..160839754, +
1.64e-52FFCP PHASE2:Mm9::chr17:87574327..87574332,+#_a973137d7b0fbb973abfa5d927311696p@chr17:87574327..87574332, +
1.64e-52FFCP PHASE1:Mm9::chr17:87574327..87574332,+#_a973137d7b0fbb973abfa5d927311696p@chr17:87574327..87574332, +
1.64e-52FFCP PHASE2:Mm9::chr8:69228447..69228492,+#_a973137d7b0fbb973abfa5d927311696p@chr8:69228447..69228492, +
1.64e-52FFCP PHASE1:Mm9::chr11:50416871..50416882,+#_a973137d7b0fbb973abfa5d927311696p5@Adamts2
1.64e-52FFCP PHASE1:Mm9::chr8:69228447..69228492,+#_a973137d7b0fbb973abfa5d927311696p@chr8:69228447..69228492, +
1.64e-52FFCP PHASE1:Mm9::chr2:178190171..178190178,+#_a973137d7b0fbb973abfa5d927311696p@chr2:178190171..178190178, +
1.64e-52FFCP PHASE2:Mm9::chr2:112043522..112043530,-#_a973137d7b0fbb973abfa5d927311696p@chr2:112043522..112043530, -
1.64e-52FFCP PHASE2:Mm9::chrX:160839744..160839754,+#_a973137d7b0fbb973abfa5d927311696p@chrX:160839744..160839754, +
4.12e-52FFCP PHASE1:Hg19::chr11:102668016..102668028,-#_88284a8ab2345b44a74def5e05c2ef94p5@MMP1
4.12e-52FFCP PHASE2:Hg19::chr11:102668016..102668028,-#_88284a8ab2345b44a74def5e05c2ef94p5@MMP1
9.8e-52FFCP PHASE2:Hg19::chr11:102661517..102661541,-#_5d7983d47bbe1b3259cfcee8174b6127p@chr11:102661517..102661541, -
9.8e-52FFCP PHASE1:Hg19::chr11:102661517..102661541,-#_5d7983d47bbe1b3259cfcee8174b6127p@chr11:102661517..102661541, -
1.64e-51FFCP PHASE2:Hg19::chr14:23236579..23236596,+#_4e50784e3419f09d6bcb07bef9646264p5@OXA1L
1.64e-51FFCP PHASE1:Hg19::chr14:23236579..23236596,+#_4e50784e3419f09d6bcb07bef9646264p5@OXA1L
2.14e-51FFCP PHASE2:Hg19::chr4:145567461..145567482,+#_fbd1958ffbde085649fe5eb0e8ca1356p9@HHIP
2.14e-51FFCP PHASE1:Hg19::chr4:145567461..145567482,+#_fbd1958ffbde085649fe5eb0e8ca1356p9@HHIP
6.64e-51FFCP PHASE2:Hg19::chr4:54931911..54931926,-#_00fe5c84d9758835da17199f71afc6c5p@chr4:54931911..54931926, -
6.64e-51FFCP PHASE1:Hg19::chr4:54931911..54931926,-#_00fe5c84d9758835da17199f71afc6c5p@chr4:54931911..54931926, -
7.65e-51FFCP PHASE2:Hg19::chr4:145567538..145567544,+#_c0bf32ec8e6adc8226b827b3dcce4772p13@HHIP
7.65e-51FFCP PHASE1:Hg19::chr4:145567538..145567544,+#_c0bf32ec8e6adc8226b827b3dcce4772p13@HHIP
2.55e-50FFCP PHASE1:Hg19::chr11:102668708..102668742,+#_639bf16b14623646c43b4e736a6cf8b4p@chr11:102668708..102668742, +
2.55e-50FFCP PHASE2:Hg19::chr11:102668708..102668742,+#_639bf16b14623646c43b4e736a6cf8b4p@chr11:102668708..102668742, +
7.98e-50FFCP PHASE2:Hg19::chr6:53359400..53359406,+#_a63d83727fb45739fe2321b7d8fba96fp@chr6:53359400..53359406, +
7.98e-50FFCP PHASE1:Hg19::chr6:53359400..53359406,+#_a63d83727fb45739fe2321b7d8fba96fp@chr6:53359400..53359406, +

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