Personal tools

FFCP PHASE1:Mm9::chr11:23978022..23978076,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr11:23978022..23978076,+
|short_description=p1@Bcl11a
|description=CAGE_peak_1_at_Bcl11a_5end
|association_with_transcript=0bp_to_ENSMUST00000000881,NM_001159289,NM_001242934,NM_016707,uc007ifs.2,uc007ift.2,uc007ifu.2,uc007ifv.2_5end
|EntrezGene=14025
|EntrezGene=14025
|HGNC=
|HGNC=
|UniProt=Q9QYE3,Q5STS7,Q3TP99,Q3US10,Q5STS9,Q5STS8
|UniProt=Q9QYE3,Q5STS7,Q3TP99,Q3US10,Q5STS9,Q5STS8
|association_with_transcript=0bp_to_ENSMUST00000000881,NM_001159289,NM_001242934,NM_016707,uc007ifs.2,uc007ift.2,uc007ifu.2,uc007ifv.2_5end
|description=CAGE_peak_1_at_Bcl11a_5end
|id=chr11:23978022..23978076,+
|ontology_enrichment_disease=
|phase1_expression=23.3817316772999,13.2610654902957,7.73498706962211,25.1045295384669,16.0286633582831,18.4667199103079,24.7629399031257,0.129123323441576,0.140788722151667,0,0,0,0.171200729931206,0.0874204024189974,83.6105502157313,90.3039692558624,60.8618833971488,173.66192202971,175.095131714528,143.443702307734,10.4603246885816,30.4823220186718,25.0751797573378,26.0787649153253,22.4821095445827,5.7423196411502,11.630573896295,14.2211013572687,11.9714754257516,15.6258680451157,10.8647950221099,10.7955214488137,21.52726756546,47.5445043046316,29.46286521463,24.7689621584154,25.5211695327961,8.78916424547506,14.8453715459522,11.5175223674236,10.5881667845583,10.2456822743767,7.2826552954673,0,0,0,3.9119567217402,2.39827672018491,0.659058548203415,0.194429899074283,0.699932108126813,1.43752564364972,114.092172119261,2.90144856804538,0.672187598284928,0,0,0,63.9320016316329,64.007908491916,51.3403436840005,1.35537812827653,0,0,0,0.7104801149461,1.49800055259202,4.2264013585371,79.7373118652193,75.8733373424102,80.7647851589307,24.2803336743233,31.1424642741775,61.7353628043368,62.9704744589813,56.9915647698213,12.1127469099328,21.1960981221412,15.8214729253931,60.4039197804288,54.4351479434337,63.030517837368,6.70039197603314,17.4456409109821,14.8214300343506,35.0608016713665,35.0234334765793,54.4286381809878,0.454357159999104,0.604572480854284,0.579728977403356,1.72084775396277,0,0,0,0,13.2017754923847,0,0,0,10.563256483251,0,0,0,6.49473123033642,3.54703811665138,5.05524445014783,12.4460428893775,421.550874577596,5.93768556259299,14.2257967948231,6.39377504455497,8.53277339847416,5.72746034099966,8.11362079236363,4.52399728786832,1.73036477414062,6.50697106139602,46.8843592533433,9.86777784679196,40.1931563597916,42.1841470227643,13.0474232852686,16.6885054296582,10.0534419270458,29.1221042937794,38.3408398418945,11.3981518888747,20.2041661046173,17.9748767285787,27.9075367719362,36.8167251690693,95.0819031451752,69.5546043938499,18.4931359658008,20.6046404096052,6.72139801412087,31.4749635643535,1.76905930903572,20.412860020988,38.5156511169603,23.4500146522142,30.9706863265201,25.3184093964001,24.0168842004187,22.4199010498487,22.2073087206557,15.78090561508,161.460426706699,134.265316919152,103.635212132566,50.6342141907698,80.6337022754234,44.2280251483152,47.7414556466429,17.7140497468459,9.12877143507205,12.3526995415063,8.80906848126337,25.6835957944022,26.0323926579017,22.3276956211658,27.4623893278844,26.3664070541521,26.2254091908543,26.7414036462969,23.8763327245661,25.8051406631445,16.785104691175,13.790066982644,12.4035278605159,7.60239934611728,9.66020507280623,11.0049263383505,81.1719201457531,124.617485591313,10.2429822724977,20.3626936330929,55.2416568886256,45.0539143409251,37.5004312447292,29.6474781196314,32.6895724451959,17.8812088545806,21.353807769503,18.6109818838132,20.3581519128218,19.8956472041151,22.0309418444606,14.3811105384675,23.1267713365923,19.9141273254367,5.50036912763937,7.65465034485183,7.88954149711563,3.05476991767971,3.10323979468201,3.0158402552837,1.45444035385792,1.32849133181642,0.941992367048249,0.370191491765402,0.889357881261447,91.2642728267034,93.3655226787714,87.0216374929384,83.1726497692862,66.0825417721622,36.411496804743,33.6604480817448,19.9426328933294,24.7105271869273,7.18841032636773,4.83783231969054,6.24075346229121,2.02063102357689,0.358794827043824,0.482443521363367,16.0735275444946,29.9396430597366,20.6965520081373,20.3694102930226,17.1323881250607,18.7607008334834,16.663054862021,8.00047956216975,11.3497303756458,10.85176979279,9.72674088810671,9.01248230936559,9.67035898449015,6.79850575333104,0,0,20.1623351937805,42.2183221846241,12.0412942490844,13.7137673312878,0,1.51482556322624,9.14973836307144,6.24701990874622,6.24727853425117,5.4962823529087,2.89638276307112,5.09537755419898,9.71545684019746,10.8134667427185,8.69633111482352,70.6906896127976,24.839514911447,10.6839362200353,11.2392001953967,11.71287873105,22.5666735177937,25.4919667962731,21.4649725444973,20.9351638529047,18.8993211443695,18.7535440245796,18.3484088149437,16.7225515559653,19.250858432775,26.5470876666085,14.7586052004998,27.8465966770104,20.4263763452273,36.1922799002934,32.7277469970369,31.7218811846757,34.7586857938856,22.1177333826567,18.1003922662333,22.2259412853657,1.64270195644597,2.1183207086382,5.29268155331909,78.1560838942615,48.6007924354676,56.8147752823228,47.1520758812389,53.3457924171449,18.0718118710507,15.2048747648618,127.640547955996,25.5919716274396,56.2991363203923,74.970645887867,134.917202760652,87.1644839916851,36.0354271586973,39.3263581029479,35.5173932677369,35.3228128665592,55.3587988766987,47.1701163734289,35.6417624711944,41.1903943148503,32.0992968706881,32.6371718251266,30.8297389855503,18.061159996898,16.7203315546413,35.4163408459548,0,8.22341003241883,6.28742263736971,3.69457257853691,3.48731523389874,2.19642963138012,3.99014611395563,2.0832701575032,0.943734099831398,0.241584120826006,0,12.0084225838708,36.0850883216492,32.1485295925909,20.0078067385804,14.859215740401,12.715606706001,7.21172697119813,8.56599257612548,7.06765149637033,5.71551049912499,4.03304740547362,6.52967800956341,3.55983814069219,5.84384510907845,30.8353321716687,0,0.0897138566094757,0,8.113962949352,1.31377732815827,3.6630324853453,35.3707825480459,7.52358156053045,93.748805874433,92.0650473014354,95.1006552309398,148.137443180259,74.673994655,82.3379348154774,72.2274075248032,100.421628319001,96.0661907046514,85.4304514390503,67.8769253200515,90.5786462620341,50.7078809089778,47.6489165453856,45.6956694529001,24.4511866238519,24.2248933303761,26.1664522693396,23.1061830906107,30.5763626234195,25.8548885888045,26.7849404768228,28.5606597783141,26.3783627908061,27.2244122849607,26.1961530205691,20.6274100181843,19.0980128259068,24.3130681473951,25.0238164228475,27.0866709384478,26.79884673006,25.274236134416,29.0692833264657,29.6444548308291,26.5689868779864,24.146492419206,29.7268773924762,23.0866993537965,30.3016826695179,26.0997039873183,19.1098695808593,26.6000178060298,29.5929366665195,28.7430850361901,44.2164722950164,20.5859815431959,30.941431782955,11.0947232599929,13.2354851471709,14.1439379728457
|phase1_expression=23.3817316772999,13.2610654902957,7.73498706962211,25.1045295384669,16.0286633582831,18.4667199103079,24.7629399031257,0.129123323441576,0.140788722151667,0,0,0,0.171200729931206,0.0874204024189974,83.6105502157313,90.3039692558624,60.8618833971488,173.66192202971,175.095131714528,143.443702307734,10.4603246885816,30.4823220186718,25.0751797573378,26.0787649153253,22.4821095445827,5.7423196411502,11.630573896295,14.2211013572687,11.9714754257516,15.6258680451157,10.8647950221099,10.7955214488137,21.52726756546,47.5445043046316,29.46286521463,24.7689621584154,25.5211695327961,8.78916424547506,14.8453715459522,11.5175223674236,10.5881667845583,10.2456822743767,7.2826552954673,0,0,0,3.9119567217402,2.39827672018491,0.659058548203415,0.194429899074283,0.699932108126813,1.43752564364972,114.092172119261,2.90144856804538,0.672187598284928,0,0,0,63.9320016316329,64.007908491916,51.3403436840005,1.35537812827653,0,0,0,0.7104801149461,1.49800055259202,4.2264013585371,79.7373118652193,75.8733373424102,80.7647851589307,24.2803336743233,31.1424642741775,61.7353628043368,62.9704744589813,56.9915647698213,12.1127469099328,21.1960981221412,15.8214729253931,60.4039197804288,54.4351479434337,63.030517837368,6.70039197603314,17.4456409109821,14.8214300343506,35.0608016713665,35.0234334765793,54.4286381809878,0.454357159999104,0.604572480854284,0.579728977403356,1.72084775396277,0,0,0,0,13.2017754923847,0,0,0,10.563256483251,0,0,0,6.49473123033642,3.54703811665138,5.05524445014783,12.4460428893775,421.550874577596,5.93768556259299,14.2257967948231,6.39377504455497,8.53277339847416,5.72746034099966,8.11362079236363,4.52399728786832,1.73036477414062,6.50697106139602,46.8843592533433,9.86777784679196,40.1931563597916,42.1841470227643,13.0474232852686,16.6885054296582,10.0534419270458,29.1221042937794,38.3408398418945,11.3981518888747,20.2041661046173,17.9748767285787,27.9075367719362,36.8167251690693,95.0819031451752,69.5546043938499,18.4931359658008,20.6046404096052,6.72139801412087,31.4749635643535,1.76905930903572,20.412860020988,38.5156511169603,23.4500146522142,30.9706863265201,25.3184093964001,24.0168842004187,22.4199010498487,22.2073087206557,15.78090561508,161.460426706699,134.265316919152,103.635212132566,50.6342141907698,80.6337022754234,44.2280251483152,47.7414556466429,17.7140497468459,9.12877143507205,12.3526995415063,8.80906848126337,25.6835957944022,26.0323926579017,22.3276956211658,27.4623893278844,26.3664070541521,26.2254091908543,26.7414036462969,23.8763327245661,25.8051406631445,16.785104691175,13.790066982644,12.4035278605159,7.60239934611728,9.66020507280623,11.0049263383505,81.1719201457531,124.617485591313,10.2429822724977,20.3626936330929,55.2416568886256,45.0539143409251,37.5004312447292,29.6474781196314,32.6895724451959,17.8812088545806,21.353807769503,18.6109818838132,20.3581519128218,19.8956472041151,22.0309418444606,14.3811105384675,23.1267713365923,19.9141273254367,5.50036912763937,7.65465034485183,7.88954149711563,3.05476991767971,3.10323979468201,3.0158402552837,1.45444035385792,1.32849133181642,0.941992367048249,0.370191491765402,0.889357881261447,91.2642728267034,93.3655226787714,87.0216374929384,83.1726497692862,66.0825417721622,36.411496804743,33.6604480817448,19.9426328933294,24.7105271869273,7.18841032636773,4.83783231969054,6.24075346229121,2.02063102357689,0.358794827043824,0.482443521363367,16.0735275444946,29.9396430597366,20.6965520081373,20.3694102930226,17.1323881250607,18.7607008334834,16.663054862021,8.00047956216975,11.3497303756458,10.85176979279,9.72674088810671,9.01248230936559,9.67035898449015,6.79850575333104,0,0,20.1623351937805,42.2183221846241,12.0412942490844,13.7137673312878,0,1.51482556322624,9.14973836307144,6.24701990874622,6.24727853425117,5.4962823529087,2.89638276307112,5.09537755419898,9.71545684019746,10.8134667427185,8.69633111482352,70.6906896127976,24.839514911447,10.6839362200353,11.2392001953967,11.71287873105,22.5666735177937,25.4919667962731,21.4649725444973,20.9351638529047,18.8993211443695,18.7535440245796,18.3484088149437,16.7225515559653,19.250858432775,26.5470876666085,14.7586052004998,27.8465966770104,20.4263763452273,36.1922799002934,32.7277469970369,31.7218811846757,34.7586857938856,22.1177333826567,18.1003922662333,22.2259412853657,1.64270195644597,2.1183207086382,5.29268155331909,78.1560838942615,48.6007924354676,56.8147752823228,47.1520758812389,53.3457924171449,18.0718118710507,15.2048747648618,127.640547955996,25.5919716274396,56.2991363203923,74.970645887867,134.917202760652,87.1644839916851,36.0354271586973,39.3263581029479,35.5173932677369,35.3228128665592,55.3587988766987,47.1701163734289,35.6417624711944,41.1903943148503,32.0992968706881,32.6371718251266,30.8297389855503,18.061159996898,16.7203315546413,35.4163408459548,0,8.22341003241883,6.28742263736971,3.69457257853691,3.48731523389874,2.19642963138012,3.99014611395563,2.0832701575032,0.943734099831398,0.241584120826006,0,12.0084225838708,36.0850883216492,32.1485295925909,20.0078067385804,14.859215740401,12.715606706001,7.21172697119813,8.56599257612548,7.06765149637033,5.71551049912499,4.03304740547362,6.52967800956341,3.55983814069219,5.84384510907845,30.8353321716687,0,0.0897138566094757,0,8.113962949352,1.31377732815827,3.6630324853453,35.3707825480459,7.52358156053045,93.748805874433,92.0650473014354,95.1006552309398,148.137443180259,74.673994655,82.3379348154774,72.2274075248032,100.421628319001,96.0661907046514,85.4304514390503,67.8769253200515,90.5786462620341,50.7078809089778,47.6489165453856,45.6956694529001,24.4511866238519,24.2248933303761,26.1664522693396,23.1061830906107,30.5763626234195,25.8548885888045,26.7849404768228,28.5606597783141,26.3783627908061,27.2244122849607,26.1961530205691,20.6274100181843,19.0980128259068,24.3130681473951,25.0238164228475,27.0866709384478,26.79884673006,25.274236134416,29.0692833264657,29.6444548308291,26.5689868779864,24.146492419206,29.7268773924762,23.0866993537965,30.3016826695179,26.0997039873183,19.1098695808593,26.6000178060298,29.5929366665195,28.7430850361901,44.2164722950164,20.5859815431959,30.941431782955,11.0947232599929,13.2354851471709,14.1439379728457
|short_description=p1@Bcl11a
}}
}}

Revision as of 16:41, 17 April 2012

Short description:p1@Bcl11a
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Bcl11a_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000000881, NM_001159289, NM_001242934, NM_016707, uc007ifs.2, uc007ift.2, uc007ifu.2, uc007ifv.2_5end
EntrezGene:Bcl11a
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Bcl11a

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G723.38
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I513.26
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I67.73
CD326+ enterocyte, pool1.CNhs13542.11848-124I325.10
CD326+ enterocyte, pool2.CNhs13197.11849-124I416.03
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I718.47
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I824.76
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A183.61
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A390.30
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A560.86
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A2173.66
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A4175.10
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A6143.44
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A310.46
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H230.48
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I925.08
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D126.08
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D222.48
GP2+ M cell, pool1.CNhs13228.11845-124H95.74
GP2+ M cell, pool2.CNhs13231.11846-124I111.63
GP2+ M cell, pool3.CNhs13240.11847-124I214.22
Ileum epithelium, pool1.CNhs13199.10252-104B911.97
Ileum epithelium, pool2.CNhs13232.10253-104C115.63
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C810.86
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I310.80
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G621.53
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E947.54
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F529.46
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F624.77
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F725.52
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G88.79
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H114.85
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H311.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G910.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H210.25
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H47.28
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.91
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C22.40
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.66
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.70
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A2114.09
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I92.90
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.67
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C363.93
Mouse Granule cells, donor2.CNhs12357.11731-123E364.01
Mouse Granule cells, donor3.CNhs12108.11636-122C751.34
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.36
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C81.50
Mouse Microglia, donor2.CNhs12634.11736-123E84.23
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D579.74
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F575.87
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D980.76
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F124.28
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D531.14
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D261.74
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F262.97
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D656.99
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D312.11
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F321.20
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D715.82
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D460.40
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F454.44
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D863.03
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E46.70
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E517.45
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I614.82
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D635.06
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F635.02
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E154.43
Mouse Schwann, donor1.CNhs12507.11728-123D90.45
Mouse Schwann, donor2.CNhs12573.11746-123F90.60
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.58
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F71.72
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A713.20
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G610.56
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G16.49
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G23.55
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G35.06
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B612.45
accessory axillary lymph node, adult.CNhs10475.1063-29H9421.55
adrenal gland, adult.CNhs10508.49-24D75.94
adrenal gland, embryo E14.CNhs11038.406-44C514.23
adrenal gland, embryo E16.CNhs11004.1254-43D66.39
adrenal gland, embryo E17.CNhs11043.1263-45I18.53
adrenal gland, embryo E18.CNhs11026.1262-18F55.73
adrenal gland, neonate N00.CNhs11191.1311-23C18.11
adrenal gland, neonate N25.CNhs11223.1377-27I34.52
amnion, adult pregnant day17.5.CNhs10488.583-22A81.73
aorta, adult.CNhs10498.46-23H16.51
bone (os femoris), adult.CNhs10483.56-12G246.88
bone (os femoris), neonate N02.CNhs11227.1985-43F59.87
bone (os femoris), neonate N16.CNhs11225.1525-43A640.19
bone (os femoris), neonate N20.CNhs11195.1350-25C342.18
cecum, adult.CNhs10467.37-13H413.05
cerebellum, adult.CNhs10494.15-8B216.69
cerebellum, neonate N30.CNhs11135.1395-42I210.05
colon, adult.CNhs10468.36-18H729.12
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C738.34
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D111.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D420.20
corpora quadrigemina, adult.CNhs10501.16-22A417.97
corpus striatum, adult.CNhs10487.19-21D827.91
corpus striatum, neonate N00.CNhs11226.630-43F136.82
cortex, adult.CNhs10473.12-14D595.08
cortex, neonate N30.CNhs11107.1392-42F269.55
diencephalon, adult.CNhs10482.20-12F218.49
diencephalon, neonate N30.CNhs11201.1388-42B220.60
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B16.72
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A231.47
epididymis, adult.CNhs10490.58-23B21.77
eyeball, adult.CNhs10484.31-12G420.41
eyeball, embryo E12.CNhs11016.345-16C638.52
eyeball, embryo E14.CNhs10521.399-16E223.45
eyeball, embryo E15.CNhs10593.426-16C930.97
eyeball, embryo E17.CNhs11023.1261-18D425.32
eyeball, neonate N00.CNhs11207.633-15C624.02
eyeball, neonate N01.CNhs11140.1532-43E722.42
eyeball, neonate N02.CNhs11205.1551-44G822.21
eyeball, neonate N16.CNhs11188.777-19A215.78
forelimb, embryo E11.CNhs10596.335-25E2161.46
forelimb, embryo E12.CNhs10600.359-14H2134.27
forelimb, embryo E13.CNhs10589.384-1E2103.64
forelimb, embryo E14.CNhs10577.413-26A850.63
forelimb, embryo E15.CNhs11007.437-20E780.63
forelimb, embryo E17.CNhs10598.1517-43C444.23
forelimb, embryo E18.CNhs11008.1520-43B547.74
gonad, embryo E13.CNhs11044.1564-45I617.71
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C89.13
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D212.35
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D58.81
heart, embryo E11.CNhs10586.331-24E925.68
heart, embryo E12.CNhs11015.353-12F526.03
heart, embryo E13.CNhs11013.376-3I922.33
heart, embryo E14.CNhs10597.403-26D427.46
heart, embryo E15.CNhs11017.431-16C826.37
heart, embryo E16.CNhs11021.457-17C626.23
heart, embryo E17.CNhs11025.479-18E526.74
heart, embryo E18.CNhs11030.1283-20G323.88
heart, neonate N00.CNhs11213.639-21E325.81
heart, neonate N03.CNhs11221.1349-25I216.79
heart, neonate N10.CNhs11118.749-24G113.79
heart, neonate N16.CNhs11209.782-15G112.40
heart, neonate N20.CNhs11127.821-26I67.60
heart, neonate N25.CNhs11196.1351-25D39.66
heart, neonate N30.CNhs11202.1390-42D211.00
hippocampus, adult.CNhs10478.13-16E881.17
hippocampus, neonate N00.CNhs11228.627-43G1124.62
intestinal mucosa, adult.CNhs10506.860-29I310.24
intestine, adult.CNhs10496.178-9A320.36
intestine, embryo E12.CNhs11019.1251-16I555.24
intestine, embryo E13.CNhs11010.381-16D545.05
intestine, embryo E15.CNhs10602.976-16D837.50
intestine, embryo E16.CNhs10585.463-22H429.65
intestine, embryo E17.CNhs10582.482-18D332.69
intestine, embryo E18.CNhs10526.1289-20F717.88
intestine, neonate N00.CNhs11126.644-26D121.35
intestine, neonate N01.CNhs11192.1322-23E918.61
intestine, neonate N06.CNhs11102.688-20B820.36
intestine, neonate N07.CNhs11095.720-20F219.90
intestine, neonate N10.CNhs11098.755-23A522.03
intestine, neonate N20.CNhs11187.827-18D114.38
intestine, neonate N25.CNhs11121.1352-25E323.13
intestine, neonate N30.CNhs11131.1384-42G119.91
kidney, embryo E14.CNhs10606.411-4I95.50
kidney, embryo E15.CNhs10997.434-16F87.65
kidney, embryo E16.CNhs10584.464-22A57.89
kidney, embryo E17.CNhs11028.483-18I23.05
kidney, embryo E18.CNhs11001.1288-20C73.10
kidney, neonate N00.CNhs11214.646-21G73.02
kidney, neonate N10.CNhs11206.758-6D51.45
kidney, neonate N20.CNhs11113.832-19I11.33
kidney, neonate N25.CNhs11122.1353-25F30.94
kidney, neonate N30.CNhs11203.1385-42H10.37
liver, adult pregnant day01.CNhs10466.508-5B20.89
liver, embryo E12.CNhs10601.355-15F891.26
liver, embryo E13.CNhs10524.378-3H693.37
liver, embryo E14.CNhs10594.409-16E187.02
liver, embryo E15.CNhs10520.433-16D783.17
liver, embryo E16.CNhs10523.462-17F566.08
liver, embryo E17.CNhs10510.481-18A336.41
liver, embryo E18.CNhs10579.499-43G433.66
liver, neonate N00.CNhs11117.641-24F419.94
liver, neonate N03.CNhs11123.1345-25G224.71
liver, neonate N06.CNhs11101.684-20A87.19
liver, neonate N07.CNhs11103.716-20H24.84
liver, neonate N10.CNhs11115.751-24B96.24
liver, neonate N20.CNhs11220.823-25A32.02
liver, neonate N25.CNhs11198.1368-26H10.36
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B116.07
lung, embryo E12.CNhs10522.354-16G229.94
lung, embryo E14.CNhs10604.404-26F820.70
lung, embryo E15.CNhs11020.432-17C520.37
lung, embryo E16.CNhs10998.458-17B617.13
lung, embryo E17.CNhs10605.480-44A618.76
lung, embryo E18.CNhs10583.1287-20I616.66
lung, neonate N00.CNhs11224.640-42C68.00
lung, neonate N06.CNhs11212.683-20E511.35
lung, neonate N07.CNhs11111.715-19A310.85
lung, neonate N10.CNhs11219.750-23E69.73
lung, neonate N20.CNhs11109.822-18A49.01
lung, neonate N25.CNhs11119.1359-25C79.67
lung, neonate N30.CNhs11133.1394-42H26.80
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B620.16
mammary gland, adult pregnant day19.CNhs10476.588-5H242.22
medulla oblongata, adult.CNhs10477.17-12C212.04
medulla oblongata, neonate N30.CNhs11200.1396-42A313.71
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.51
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E19.15
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E26.25
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E36.25
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D75.50
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.90
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D95.10
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D49.72
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D510.81
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D68.70
olfactory brain, adult.CNhs10489.18-22I970.69
ovary, adult.CNhs10507.91-2I724.84
ovary, embryo E18.CNhs11040.505-44H710.68
ovary, neonate N00.CNhs11217.1299-22I411.24
oviduct, adult pregnant day01.CNhs10500.988-6G611.71
pancreas, adult.CNhs10486.34-16E422.57
pancreas, embryo E14.CNhs11012.405-44F425.49
pancreas, embryo E15.CNhs11042.1556-45F221.46
pancreas, embryo E16.CNhs11003.460-26E520.94
pancreas, embryo E17.CNhs10599.1558-45G318.90
pancreas, embryo E18.CNhs10580.1535-43I718.75
pancreas, neonate N00.CNhs11105.645-26G918.35
pancreas, neonate N01.CNhs11138.1531-43D716.72
pancreas, neonate N02.CNhs11139.1539-43D819.25
pancreas, neonate N16.CNhs11136.787-43B626.55
pancreas, neonate N25.CNhs11094.1555-45E214.76
pancreas, neonate N30.CNhs11182.1548-44H527.85
pituitary gland, adult.CNhs10493.21-1G820.43
pituitary gland, embryo E12.CNhs11018.346-16E636.19
pituitary gland, embryo E13.CNhs11009.370-44C732.73
pituitary gland, embryo E14.CNhs11037.398-44A531.72
pituitary gland, embryo E15.CNhs10592.427-16B934.76
pituitary gland, embryo E16.CNhs11036.449-43F622.12
pituitary gland, embryo E17.CNhs11039.1265-44F518.10
pituitary gland, neonate N00.CNhs11190.1308-22E922.23
placenta, adult pregnant day10.CNhs10472.539-13I71.64
placenta, adult pregnant day17.CNhs10464.577-18G32.12
prostate, adult.CNhs10470.859-1F85.29
skin, adult.CNhs10492.30-1C378.16
skin, neonate N00.CNhs11124.650-25G448.60
skin, neonate N03.CNhs11215.662-22H356.81
skin, neonate N06.CNhs11097.693-20I547.15
skin, neonate N10.CNhs11108.762-6C453.35
small intestine, neonate N16.CNhs11114.790-21I118.07
spinal cord, adult.CNhs10505.24-13C915.20
spleen, adult.CNhs10465.25-2G2127.64
spleen, embryo E16.CNhs11035.461-43C125.59
spleen, embryo E18.CNhs11011.1271-21F256.30
spleen, neonate N10.CNhs11116.752-24D174.97
spleen, neonate N20.CNhs11112.824-19H1134.92
spleen, neonate N25.CNhs11099.1354-25G387.16
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C636.04
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C939.33
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D335.52
stomach, adult.CNhs10503.33-1H635.32
stomach, embryo E12.CNhs10588.356-43E355.36
stomach, embryo E15.CNhs10603.1252-16G847.17
stomach, embryo E16.CNhs11022.459-17D435.64
stomach, embryo E17.CNhs11006.1035-18D541.19
stomach, embryo E18.CNhs10999.1286-20C632.10
stomach, neonate N03.CNhs11193.1340-24B832.64
stomach, neonate N07.CNhs11210.718-18A930.83
stomach, neonate N25.CNhs11104.1355-25E418.06
stomach, neonate N30.CNhs11134.1386-42I116.72
submandibular gland, adult.CNhs10469.59-29C135.42
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F58.22
testis, embryo E15.CNhs11034.443-27C56.29
testis, embryo E16.CNhs11033.470-26G53.69
testis, embryo E17.CNhs11029.486-18I53.49
testis, embryo E18.CNhs11027.503-18G52.20
testis, neonate N00.CNhs11189.1300-22B73.99
testis, neonate N07.CNhs11222.726-26I42.08
testis, neonate N10.CNhs11204.763-44D90.94
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B512.01
thymus, embryo E14.CNhs11041.402-44I436.09
thymus, embryo E15.CNhs11005.430-45I232.15
thymus, embryo E16.CNhs11002.456-26C520.01
thymus, embryo E17.CNhs10581.478-18C114.86
thymus, embryo E18.CNhs10595.1273-19G412.72
thymus, neonate N02.CNhs11181.1541-43F87.21
thymus, neonate N03.CNhs11137.2104-43C78.57
thymus, neonate N06.CNhs11197.681-26C47.07
thymus, neonate N07.CNhs11211.713-19D35.72
thymus, neonate N10.CNhs11194.748-24E44.03
thymus, neonate N20.CNhs11186.820-7A26.53
thymus, neonate N25.CNhs11125.1362-25G73.56
thymus, neonate N30.CNhs11132.1393-42G25.84
tongue, adult.CNhs10499.32-1B430.84
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E48.11
uterus, adult pregnant day19.CNhs10497.590-15F51.31
uterus, adult.CNhs10509.92-27E53.66
vagina, adult.CNhs10502.89-27D535.37
vesicular gland, adult.CNhs10491.51-27F87.52
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A193.75
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A292.07
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A395.10
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D7148.14
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A474.67
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A582.34
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A672.23
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A7100.42
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A896.07
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A985.43
whole body, embryo E11.CNhs11014.324-5I867.88
whole body, embryo E12.CNhs10587.857-27C990.58
whole body, embryo E13.CNhs10512.372-23H250.71
whole body, embryo E14.5.CNhs10578.420-27D247.65
whole body, embryo E14.CNhs10519.395-14B145.70
whole body, embryo E16.CNhs10514.453-14F224.45
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G524.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G526.17
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G523.11
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G530.58
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G525.85
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G526.78
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G528.56
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G526.38
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G527.22
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G526.20
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G520.63
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G519.10
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G524.31
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G525.02
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G527.09
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G526.80
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G525.27
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G529.07
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G529.64
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G526.57
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G524.15
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G529.73
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G523.09
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G530.30
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G526.10
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G519.11
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G526.60
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G529.59
whole body, embryo E17.5.CNhs10513.490-9F928.74
whole body, embryo E17.CNhs10517.475-3I544.22
whole body, embryo E18.CNhs10516.493-3B320.59
whole body, neonate N00.CNhs10525.657-19C230.94
whole body, neonate N01.CNhs10576.659-23C611.09
whole body, neonate N06.CNhs10515.692-21D113.24
whole body, neonate N10.CNhs10518.761-6B414.14





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr11:23978022..23978076,%2B&oldid=740949"