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FFCP PHASE1:Mm9::chr12:31596524..31596598,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr12:31596524..31596598,+
|short_description=p1@Sh3yl1
|description=CAGE_peak_1_at_Sh3yl1_5end
|association_with_transcript=0bp_to_ENSMUST00000020997,ENSMUST00000110880,ENSMUST00000142693,NM_013709,uc007ngz.1,uc007nha.1,uc011ylg.1_5end
|EntrezGene=24057
|EntrezGene=24057
|HGNC=
|HGNC=
|UniProt=O08641
|UniProt=O08641
|association_with_transcript=0bp_to_ENSMUST00000020997,ENSMUST00000110880,ENSMUST00000142693,NM_013709,uc007ngz.1,uc007nha.1,uc011ylg.1_5end
|description=CAGE_peak_1_at_Sh3yl1_5end
|id=chr12:31596524..31596598,+
|ontology_enrichment_disease=
|phase1_expression=8.80818659076367,29.3139342417063,39.5849338268896,44.462239062104,40.5725541256541,11.2479112180966,13.315920513945,1.80772652818207,0.563154888606667,0.70219357896598,0.513653904676515,0.558405112967355,2.9104124088305,1.39872643870396,23.9839028507277,42.9247566866431,33.578970150151,2.20823515750766,2.74228867211478,4.2438965179803,8.41928572495591,0.496454756004426,0.261199789138935,12.9593862462659,15.8292403936347,31.5827580263261,23.6919097887491,21.331652035903,19.9524590429193,13.1055667475164,15.9645967671819,6.35030673459631,5.53558308826113,0,14.1537293678125,8.97667084935859,9.59595974433135,15.0671387065287,3.906676722619,8.37637990358077,14.7057872007754,12.294818729252,13.5942898848723,1.6366586336825,2.43304634926835,3.12029478674859,3.12956537739216,1.09012578190223,0.878744730937887,1.36100929351998,1.95980990275508,1.43752564364972,2.85230430298152,3.62681071005672,2.01656279485478,3.08711323243136,2.57880095944881,3.09403255366465,26.5034563726073,21.1596391708813,27.8885817542719,3.72728985276045,2.66788438833342,0.449949858640699,0,0,2.69640099466564,1.53687322128622,11.0947885170071,14.3106294631592,11.3575479129746,13.139945282575,15.2399293256613,15.1888591026543,14.8560480078266,15.6267193723704,8.8092704799511,7.40586560894089,6.14426133024974,26.509143833769,29.2760459527711,28.129322010065,7.81712397203867,5.6276261003168,6.1119299110724,18.2669722993674,17.2269733766915,23.1135312823373,3.25622631332691,7.55715601067855,5.79728977403356,13.7667820317022,18.3592260101093,10.2543606411185,16.2444104361917,17.0250217096988,8.28622078777336,1.1930122580464,1.29893002301434,1.41335829804136,9.71819596459095,1.28326477414318,0,0,3.89683873820185,8.10751569520315,6.0662933401774,10.0481814152773,0.776813650941515,2.3750742250372,8.15381035800839,6.69824052286711,9.22461989024234,5.42601505989441,6.46737889246376,2.38766523526383,17.7980376768749,1.87979163995885,13.2691582792481,7.117741397686,12.8088080707028,14.0613823409214,20.5030937339934,8.49064311333487,7.12118803165747,9.96282515313506,0.479260498023681,0.599902730993408,0.889491589511453,7.04016005202667,5.49000723382352,13.6963243803022,5.9100268865374,8.43861009190091,9.14267396062064,9.08551073179443,9.980257657331,16.048499208702,18.4487613656583,9.46988351489133,9.75903322220278,11.2652031172402,10.803727788321,10.8507468841715,9.79725587779121,10.1209839025031,5.71580519814346,7.24369438069244,5.38919982332106,5.10586416453112,7.9178005873777,5.47989331068937,7.50727572909114,2.78601733217733,10.2891068203972,7.16523360546575,1.40442637462647,1.80143534980301,0.284163499395593,6.21377317606506,7.27030785941398,5.04173772090842,4.49814997611899,4.32881309844288,3.5481435964097,3.25547522650571,2.68273401399619,2.33530684734339,1.6455984991348,1.47750717671186,2.59420190546738,1.90059983652932,2.19550115291051,3.62357330653004,4.20579897128254,22.433205498684,14.8688452342709,10.8424732332053,4.90562976231038,8.36052018697579,7.98978260196979,7.86565746031036,7.56085349072559,9.89173255785308,10.4396393539793,10.7054320570607,14.5774421104156,16.5133871794155,13.4525220112193,13.4822911298133,16.6426298403515,16.7278669533668,6.06937283049861,10.1681176222659,12.3978509240388,11.2008230314923,8.92181440971078,10.5905088034381,14.1649843158336,22.7319627888587,18.9968460688064,25.1730214400473,19.2694207606647,38.2075292089855,39.3117990226406,50.5939752865921,73.6382240640266,72.3531479257251,61.1102044275408,37.975890143507,16.2135226775035,19.4938603363538,28.7536413054709,19.7234702264307,21.8426371180192,16.4176270665623,15.7869723899283,16.4030797263545,1.47802552133284,8.14813070613084,5.37784422258685,6.95954851678271,4.92849521405854,6.03022526790537,6.9032655856944,6.82967767502296,6.77831119656621,4.4292937929755,6.218735977642,5.40748938561935,2.93564469172023,5.78596234326046,0,0,3.44234991113325,6.07060841870411,7.06422595946285,8.90808818100744,2.13115428989678,3.02965112645248,6.31016438832513,4.29482618726302,6.46270193198397,8.60287672629187,8.24355094104858,6.79383673893198,5.66734982344852,9.05993159525067,9.88219444866309,5.14114106274891,4.68402281187286,7.83488656135923,8.30723492703238,4.12425307431339,5.30980553359851,6.31229654002952,3.62788268357701,5.28094223316515,5.02013217897314,4.61152721915891,6.97756391554197,3.63533729477506,3.92147116223193,3.79244109522979,9.48767477174989,1.03135543248187,8.85142974959849,7.74262704334634,7.89087971074802,7.71613326113732,9.3990323830405,7.31312152168489,9.3792941743209,6.08929898229199,4.69343416127421,4.44847348814022,7.71849393192367,8.57408515295696,6.29711264114032,5.66941494324665,9.43041517624778,17.8913580722117,13.9910801582328,7.6024373824309,22.5549562653166,9.49379592630823,19.0750363190803,41.2526920840273,20.7775226135958,30.4274970364675,2.20971958992012,2.6590775941495,1.65839968565309,8.59203556213602,9.64824780422463,8.53941761932765,8.5324219249223,8.57262013659322,10.2630404960703,8.36158947585888,9.4224939526883,10.9937495633292,18.6645561540182,6.83473244395618,6.76431526421028,5.08356256549528,6.12196414691261,6.61134040369762,4.52059382172059,7.43406952159424,7.62822051197401,7.16124116641726,6.50127935439407,5.55643477899814,12.6733202753461,2.52808896502543,3.64905387522296,3.69759445793378,2.07873316764472,1.9692936523423,0.79472541912506,1.80293174279953,1.32920574457119,0.908698049533329,1.5241361331,0.604957110821043,0.877120926657772,1.73181314952593,1.75315353272353,4.76133805591944,4.43971906748129,4.93426211352116,4.36500002546604,2.70465431645067,14.451550609741,11.9048555773722,11.1471557121114,11.5361583928134,10.7302850097243,9.66682996665071,8.02053718815155,6.53042092906013,6.16574267793578,6.0431511791176,8.10027000278167,9.90706647093285,5.89085131679466,7.24864436452548,10.4825221060018,10.7736715818278,17.5855613926758,16.7743634777123,16.5594398476106,9.92754945630076,11.556829845684,10.0957178047058,7.38114182061175,8.33900798820532,8.87177549615839,9.05406438653166,8.61501868722918,9.47572255592065,9.24711050185374,11.9073422820768,10.3137050090921,9.83837024364896,9.06588981767275,12.0703114510206,9.25746981440622,10.1161209510822,6.67621331852499,9.30217066446903,10.540250606517,11.1691282417013,10.6098224266208,9.47050961176234,11.9507620184358,11.7839877048125,8.77899134118889,8.96390789617628,7.7753898202241,9.76102099471586,10.8027702149439,7.99393849401427,7.95367468714389,11.1732948105115,2.48674831689496,9.04424818390014,6.95603506861264
|phase1_expression=8.80818659076367,29.3139342417063,39.5849338268896,44.462239062104,40.5725541256541,11.2479112180966,13.315920513945,1.80772652818207,0.563154888606667,0.70219357896598,0.513653904676515,0.558405112967355,2.9104124088305,1.39872643870396,23.9839028507277,42.9247566866431,33.578970150151,2.20823515750766,2.74228867211478,4.2438965179803,8.41928572495591,0.496454756004426,0.261199789138935,12.9593862462659,15.8292403936347,31.5827580263261,23.6919097887491,21.331652035903,19.9524590429193,13.1055667475164,15.9645967671819,6.35030673459631,5.53558308826113,0,14.1537293678125,8.97667084935859,9.59595974433135,15.0671387065287,3.906676722619,8.37637990358077,14.7057872007754,12.294818729252,13.5942898848723,1.6366586336825,2.43304634926835,3.12029478674859,3.12956537739216,1.09012578190223,0.878744730937887,1.36100929351998,1.95980990275508,1.43752564364972,2.85230430298152,3.62681071005672,2.01656279485478,3.08711323243136,2.57880095944881,3.09403255366465,26.5034563726073,21.1596391708813,27.8885817542719,3.72728985276045,2.66788438833342,0.449949858640699,0,0,2.69640099466564,1.53687322128622,11.0947885170071,14.3106294631592,11.3575479129746,13.139945282575,15.2399293256613,15.1888591026543,14.8560480078266,15.6267193723704,8.8092704799511,7.40586560894089,6.14426133024974,26.509143833769,29.2760459527711,28.129322010065,7.81712397203867,5.6276261003168,6.1119299110724,18.2669722993674,17.2269733766915,23.1135312823373,3.25622631332691,7.55715601067855,5.79728977403356,13.7667820317022,18.3592260101093,10.2543606411185,16.2444104361917,17.0250217096988,8.28622078777336,1.1930122580464,1.29893002301434,1.41335829804136,9.71819596459095,1.28326477414318,0,0,3.89683873820185,8.10751569520315,6.0662933401774,10.0481814152773,0.776813650941515,2.3750742250372,8.15381035800839,6.69824052286711,9.22461989024234,5.42601505989441,6.46737889246376,2.38766523526383,17.7980376768749,1.87979163995885,13.2691582792481,7.117741397686,12.8088080707028,14.0613823409214,20.5030937339934,8.49064311333487,7.12118803165747,9.96282515313506,0.479260498023681,0.599902730993408,0.889491589511453,7.04016005202667,5.49000723382352,13.6963243803022,5.9100268865374,8.43861009190091,9.14267396062064,9.08551073179443,9.980257657331,16.048499208702,18.4487613656583,9.46988351489133,9.75903322220278,11.2652031172402,10.803727788321,10.8507468841715,9.79725587779121,10.1209839025031,5.71580519814346,7.24369438069244,5.38919982332106,5.10586416453112,7.9178005873777,5.47989331068937,7.50727572909114,2.78601733217733,10.2891068203972,7.16523360546575,1.40442637462647,1.80143534980301,0.284163499395593,6.21377317606506,7.27030785941398,5.04173772090842,4.49814997611899,4.32881309844288,3.5481435964097,3.25547522650571,2.68273401399619,2.33530684734339,1.6455984991348,1.47750717671186,2.59420190546738,1.90059983652932,2.19550115291051,3.62357330653004,4.20579897128254,22.433205498684,14.8688452342709,10.8424732332053,4.90562976231038,8.36052018697579,7.98978260196979,7.86565746031036,7.56085349072559,9.89173255785308,10.4396393539793,10.7054320570607,14.5774421104156,16.5133871794155,13.4525220112193,13.4822911298133,16.6426298403515,16.7278669533668,6.06937283049861,10.1681176222659,12.3978509240388,11.2008230314923,8.92181440971078,10.5905088034381,14.1649843158336,22.7319627888587,18.9968460688064,25.1730214400473,19.2694207606647,38.2075292089855,39.3117990226406,50.5939752865921,73.6382240640266,72.3531479257251,61.1102044275408,37.975890143507,16.2135226775035,19.4938603363538,28.7536413054709,19.7234702264307,21.8426371180192,16.4176270665623,15.7869723899283,16.4030797263545,1.47802552133284,8.14813070613084,5.37784422258685,6.95954851678271,4.92849521405854,6.03022526790537,6.9032655856944,6.82967767502296,6.77831119656621,4.4292937929755,6.218735977642,5.40748938561935,2.93564469172023,5.78596234326046,0,0,3.44234991113325,6.07060841870411,7.06422595946285,8.90808818100744,2.13115428989678,3.02965112645248,6.31016438832513,4.29482618726302,6.46270193198397,8.60287672629187,8.24355094104858,6.79383673893198,5.66734982344852,9.05993159525067,9.88219444866309,5.14114106274891,4.68402281187286,7.83488656135923,8.30723492703238,4.12425307431339,5.30980553359851,6.31229654002952,3.62788268357701,5.28094223316515,5.02013217897314,4.61152721915891,6.97756391554197,3.63533729477506,3.92147116223193,3.79244109522979,9.48767477174989,1.03135543248187,8.85142974959849,7.74262704334634,7.89087971074802,7.71613326113732,9.3990323830405,7.31312152168489,9.3792941743209,6.08929898229199,4.69343416127421,4.44847348814022,7.71849393192367,8.57408515295696,6.29711264114032,5.66941494324665,9.43041517624778,17.8913580722117,13.9910801582328,7.6024373824309,22.5549562653166,9.49379592630823,19.0750363190803,41.2526920840273,20.7775226135958,30.4274970364675,2.20971958992012,2.6590775941495,1.65839968565309,8.59203556213602,9.64824780422463,8.53941761932765,8.5324219249223,8.57262013659322,10.2630404960703,8.36158947585888,9.422493952688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|short_description=p1@Sh3yl1
}}
}}

Revision as of 18:38, 17 April 2012

Short description:p1@Sh3yl1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Sh3yl1_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000020997, ENSMUST00000110880, ENSMUST00000142693, NM_013709, uc007ngz.1, uc007nha.1, uc011ylg.1_5end
EntrezGene:Sh3yl1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Sh3yl1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G78.81
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I529.31
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I639.58
CD326+ enterocyte, pool1.CNhs13542.11848-124I344.46
CD326+ enterocyte, pool2.CNhs13197.11849-124I440.57
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I711.25
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I813.32
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E91.81
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.56
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.70
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.51
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.56
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E42.91
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E81.40
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A123.98
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A342.92
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A533.58
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A22.21
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A42.74
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A64.24
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A38.42
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.50
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D112.96
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D215.83
GP2+ M cell, pool1.CNhs13228.11845-124H931.58
GP2+ M cell, pool2.CNhs13231.11846-124I123.69
GP2+ M cell, pool3.CNhs13240.11847-124I221.33
Ileum epithelium, pool1.CNhs13199.10252-104B919.95
Ileum epithelium, pool2.CNhs13232.10253-104C113.11
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C815.96
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I36.35
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G65.54
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F514.15
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F68.98
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F79.60
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G815.07
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H13.91
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H38.38
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G914.71
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H212.29
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H413.59
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.64
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D92.43
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B33.12
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.13
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.09
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.88
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.36
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.96
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A22.85
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I93.63
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A12.02
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C13.09
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.58
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C53.09
Mouse Granule cells, donor1.CNhs12131.11713-123C326.50
Mouse Granule cells, donor2.CNhs12357.11731-123E321.16
Mouse Granule cells, donor3.CNhs12108.11636-122C727.89
Mouse Meningeal cells, donor1.CNhs12132.11716-123C63.73
Mouse Meningeal cells, donor3.CNhs12109.11639-122D12.67
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C82.70
Mouse Microglia, donor2.CNhs12634.11736-123E81.54
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D511.09
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F514.31
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D911.36
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F113.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D515.24
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D215.19
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F214.86
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D615.63
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D38.81
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F37.41
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D76.14
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D426.51
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F429.28
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D828.13
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E47.82
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E55.63
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I66.11
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D618.27
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F617.23
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E123.11
Mouse Schwann, donor1.CNhs12507.11728-123D93.26
Mouse Schwann, donor2.CNhs12573.11746-123F97.56
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G35.80
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F713.77
Mouse hepatocyte, donor1.CNhs13078.11714-123C418.36
Mouse hepatocyte, donor3.CNhs12615.11637-122C810.25
Mouse hepatocyte, donor6.CNhs13090.11822-124F416.24
Mouse hepatocyte, donor8.CNhs13091.11824-124F617.03
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A78.29
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.19
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.30
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.41
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G69.72
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G13.90
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G28.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G36.07
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B610.05
accessory axillary lymph node, adult.CNhs10475.1063-29H90.78
adrenal gland, adult.CNhs10508.49-24D72.38
adrenal gland, embryo E14.CNhs11038.406-44C58.15
adrenal gland, embryo E16.CNhs11004.1254-43D66.70
adrenal gland, embryo E17.CNhs11043.1263-45I19.22
adrenal gland, embryo E18.CNhs11026.1262-18F55.43
adrenal gland, neonate N00.CNhs11191.1311-23C16.47
adrenal gland, neonate N25.CNhs11223.1377-27I32.39
amnion, adult pregnant day17.5.CNhs10488.583-22A817.80
aorta, adult.CNhs10498.46-23H11.88
bone (os femoris), adult.CNhs10483.56-12G213.27
bone (os femoris), neonate N02.CNhs11227.1985-43F57.12
bone (os femoris), neonate N16.CNhs11225.1525-43A612.81
bone (os femoris), neonate N20.CNhs11195.1350-25C314.06
cecum, adult.CNhs10467.37-13H420.50
cerebellum, adult.CNhs10494.15-8B28.49
cerebellum, neonate N30.CNhs11135.1395-42I27.12
colon, adult.CNhs10468.36-18H79.96
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.48
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.89
corpora quadrigemina, adult.CNhs10501.16-22A47.04
corpus striatum, adult.CNhs10487.19-21D85.49
corpus striatum, neonate N00.CNhs11226.630-43F113.70
cortex, adult.CNhs10473.12-14D55.91
cortex, neonate N30.CNhs11107.1392-42F28.44
diencephalon, adult.CNhs10482.20-12F29.14
diencephalon, neonate N30.CNhs11201.1388-42B29.09
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B19.98
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A216.05
epididymis, adult.CNhs10490.58-23B218.45
eyeball, adult.CNhs10484.31-12G49.47
eyeball, embryo E12.CNhs11016.345-16C69.76
eyeball, embryo E14.CNhs10521.399-16E211.27
eyeball, embryo E15.CNhs10593.426-16C910.80
eyeball, embryo E17.CNhs11023.1261-18D410.85
eyeball, neonate N00.CNhs11207.633-15C69.80
eyeball, neonate N01.CNhs11140.1532-43E710.12
eyeball, neonate N02.CNhs11205.1551-44G85.72
eyeball, neonate N16.CNhs11188.777-19A27.24
forelimb, embryo E11.CNhs10596.335-25E25.39
forelimb, embryo E12.CNhs10600.359-14H25.11
forelimb, embryo E13.CNhs10589.384-1E27.92
forelimb, embryo E14.CNhs10577.413-26A85.48
forelimb, embryo E15.CNhs11007.437-20E77.51
forelimb, embryo E17.CNhs10598.1517-43C42.79
forelimb, embryo E18.CNhs11008.1520-43B510.29
gonad, embryo E13.CNhs11044.1564-45I67.17
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C81.40
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.80
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E96.21
heart, embryo E12.CNhs11015.353-12F57.27
heart, embryo E13.CNhs11013.376-3I95.04
heart, embryo E14.CNhs10597.403-26D44.50
heart, embryo E15.CNhs11017.431-16C84.33
heart, embryo E16.CNhs11021.457-17C63.55
heart, embryo E17.CNhs11025.479-18E53.26
heart, embryo E18.CNhs11030.1283-20G32.68
heart, neonate N00.CNhs11213.639-21E32.34
heart, neonate N03.CNhs11221.1349-25I21.65
heart, neonate N10.CNhs11118.749-24G11.48
heart, neonate N16.CNhs11209.782-15G12.59
heart, neonate N20.CNhs11127.821-26I61.90
heart, neonate N25.CNhs11196.1351-25D32.20
heart, neonate N30.CNhs11202.1390-42D23.62
hippocampus, adult.CNhs10478.13-16E84.21
hippocampus, neonate N00.CNhs11228.627-43G122.43
intestinal mucosa, adult.CNhs10506.860-29I314.87
intestine, adult.CNhs10496.178-9A310.84
intestine, embryo E12.CNhs11019.1251-16I54.91
intestine, embryo E13.CNhs11010.381-16D58.36
intestine, embryo E15.CNhs10602.976-16D87.99
intestine, embryo E16.CNhs10585.463-22H47.87
intestine, embryo E17.CNhs10582.482-18D37.56
intestine, embryo E18.CNhs10526.1289-20F79.89
intestine, neonate N00.CNhs11126.644-26D110.44
intestine, neonate N01.CNhs11192.1322-23E910.71
intestine, neonate N06.CNhs11102.688-20B814.58
intestine, neonate N07.CNhs11095.720-20F216.51
intestine, neonate N10.CNhs11098.755-23A513.45
intestine, neonate N20.CNhs11187.827-18D113.48
intestine, neonate N25.CNhs11121.1352-25E316.64
intestine, neonate N30.CNhs11131.1384-42G116.73
kidney, embryo E14.CNhs10606.411-4I96.07
kidney, embryo E15.CNhs10997.434-16F810.17
kidney, embryo E16.CNhs10584.464-22A512.40
kidney, embryo E17.CNhs11028.483-18I211.20
kidney, embryo E18.CNhs11001.1288-20C78.92
kidney, neonate N00.CNhs11214.646-21G710.59
kidney, neonate N10.CNhs11206.758-6D514.16
kidney, neonate N20.CNhs11113.832-19I122.73
kidney, neonate N25.CNhs11122.1353-25F319.00
kidney, neonate N30.CNhs11203.1385-42H125.17
liver, adult pregnant day01.CNhs10466.508-5B219.27
liver, embryo E12.CNhs10601.355-15F838.21
liver, embryo E13.CNhs10524.378-3H639.31
liver, embryo E14.CNhs10594.409-16E150.59
liver, embryo E15.CNhs10520.433-16D773.64
liver, embryo E16.CNhs10523.462-17F572.35
liver, embryo E17.CNhs10510.481-18A361.11
liver, embryo E18.CNhs10579.499-43G437.98
liver, neonate N00.CNhs11117.641-24F416.21
liver, neonate N03.CNhs11123.1345-25G219.49
liver, neonate N06.CNhs11101.684-20A828.75
liver, neonate N07.CNhs11103.716-20H219.72
liver, neonate N10.CNhs11115.751-24B921.84
liver, neonate N20.CNhs11220.823-25A316.42
liver, neonate N25.CNhs11198.1368-26H115.79
liver, neonate N30.CNhs11106.1382-42D116.40
lung, adult.CNhs10474.28-22B11.48
lung, embryo E12.CNhs10522.354-16G28.15
lung, embryo E14.CNhs10604.404-26F85.38
lung, embryo E15.CNhs11020.432-17C56.96
lung, embryo E16.CNhs10998.458-17B64.93
lung, embryo E17.CNhs10605.480-44A66.03
lung, embryo E18.CNhs10583.1287-20I66.90
lung, neonate N00.CNhs11224.640-42C66.83
lung, neonate N06.CNhs11212.683-20E56.78
lung, neonate N07.CNhs11111.715-19A34.43
lung, neonate N10.CNhs11219.750-23E66.22
lung, neonate N20.CNhs11109.822-18A45.41
lung, neonate N25.CNhs11119.1359-25C72.94
lung, neonate N30.CNhs11133.1394-42H25.79
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B63.44
mammary gland, adult pregnant day19.CNhs10476.588-5H26.07
medulla oblongata, adult.CNhs10477.17-12C27.06
medulla oblongata, neonate N30.CNhs11200.1396-42A38.91
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C72.13
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C23.03
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E16.31
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E24.29
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E36.46
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D78.60
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D88.24
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D96.79
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D45.67
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D59.06
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D69.88
olfactory brain, adult.CNhs10489.18-22I95.14
ovary, adult.CNhs10507.91-2I74.68
ovary, embryo E18.CNhs11040.505-44H77.83
ovary, neonate N00.CNhs11217.1299-22I48.31
oviduct, adult pregnant day01.CNhs10500.988-6G64.12
pancreas, adult.CNhs10486.34-16E45.31
pancreas, embryo E14.CNhs11012.405-44F46.31
pancreas, embryo E15.CNhs11042.1556-45F23.63
pancreas, embryo E16.CNhs11003.460-26E55.28
pancreas, embryo E17.CNhs10599.1558-45G35.02
pancreas, embryo E18.CNhs10580.1535-43I74.61
pancreas, neonate N00.CNhs11105.645-26G96.98
pancreas, neonate N01.CNhs11138.1531-43D73.64
pancreas, neonate N02.CNhs11139.1539-43D83.92
pancreas, neonate N16.CNhs11136.787-43B63.79
pancreas, neonate N25.CNhs11094.1555-45E29.49
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G88.85
pituitary gland, embryo E12.CNhs11018.346-16E67.74
pituitary gland, embryo E13.CNhs11009.370-44C77.89
pituitary gland, embryo E14.CNhs11037.398-44A57.72
pituitary gland, embryo E15.CNhs10592.427-16B99.40
pituitary gland, embryo E16.CNhs11036.449-43F67.31
pituitary gland, embryo E17.CNhs11039.1265-44F59.38
pituitary gland, neonate N00.CNhs11190.1308-22E96.09
placenta, adult pregnant day10.CNhs10472.539-13I74.69
placenta, adult pregnant day17.CNhs10464.577-18G34.45
prostate, adult.CNhs10470.859-1F87.72
skin, adult.CNhs10492.30-1C38.57
skin, neonate N00.CNhs11124.650-25G46.30
skin, neonate N03.CNhs11215.662-22H35.67
skin, neonate N06.CNhs11097.693-20I59.43
skin, neonate N10.CNhs11108.762-6C417.89
small intestine, neonate N16.CNhs11114.790-21I113.99
spinal cord, adult.CNhs10505.24-13C97.60
spleen, adult.CNhs10465.25-2G222.55
spleen, embryo E16.CNhs11035.461-43C19.49
spleen, embryo E18.CNhs11011.1271-21F219.08
spleen, neonate N10.CNhs11116.752-24D141.25
spleen, neonate N20.CNhs11112.824-19H120.78
spleen, neonate N25.CNhs11099.1354-25G330.43
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C62.21
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C92.66
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.66
stomach, adult.CNhs10503.33-1H68.59
stomach, embryo E12.CNhs10588.356-43E39.65
stomach, embryo E15.CNhs10603.1252-16G88.54
stomach, embryo E16.CNhs11022.459-17D48.53
stomach, embryo E17.CNhs11006.1035-18D58.57
stomach, embryo E18.CNhs10999.1286-20C610.26
stomach, neonate N03.CNhs11193.1340-24B88.36
stomach, neonate N07.CNhs11210.718-18A99.42
stomach, neonate N25.CNhs11104.1355-25E410.99
stomach, neonate N30.CNhs11134.1386-42I118.66
submandibular gland, adult.CNhs10469.59-29C16.83
testis, adult.CNhs10504.57-7G56.76
testis, embryo E13.CNhs11031.389-23F55.08
testis, embryo E15.CNhs11034.443-27C56.12
testis, embryo E16.CNhs11033.470-26G56.61
testis, embryo E17.CNhs11029.486-18I54.52
testis, embryo E18.CNhs11027.503-18G57.43
testis, neonate N00.CNhs11189.1300-22B77.63
testis, neonate N07.CNhs11222.726-26I47.16
testis, neonate N10.CNhs11204.763-44D96.50
testis, neonate N20.CNhs11110.839-18H35.56
testis, neonate N30.CNhs11130.1391-42E212.67
thymus, adult.CNhs10471.38-12B52.53
thymus, embryo E14.CNhs11041.402-44I43.65
thymus, embryo E15.CNhs11005.430-45I23.70
thymus, embryo E16.CNhs11002.456-26C52.08
thymus, embryo E17.CNhs10581.478-18C11.97
thymus, embryo E18.CNhs10595.1273-19G40.79
thymus, neonate N02.CNhs11181.1541-43F81.80
thymus, neonate N03.CNhs11137.2104-43C71.33
thymus, neonate N06.CNhs11197.681-26C40.91
thymus, neonate N07.CNhs11211.713-19D31.52
thymus, neonate N10.CNhs11194.748-24E40.60
thymus, neonate N20.CNhs11186.820-7A20.88
thymus, neonate N25.CNhs11125.1362-25G71.73
thymus, neonate N30.CNhs11132.1393-42G21.75
tongue, adult.CNhs10499.32-1B44.76
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H34.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F74.93
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G54.37
urinary bladder, adult.CNhs10481.879-12E42.70
uterus, adult pregnant day19.CNhs10497.590-15F514.45
uterus, adult.CNhs10509.92-27E511.90
vagina, adult.CNhs10502.89-27D511.15
vesicular gland, adult.CNhs10491.51-27F811.54
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A110.73
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A29.67
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A38.02
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D76.53
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A46.17
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A56.04
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A68.10
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A79.91
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A85.89
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A97.25
whole body, embryo E11.CNhs11014.324-5I810.48
whole body, embryo E12.CNhs10587.857-27C910.77
whole body, embryo E13.CNhs10512.372-23H217.59
whole body, embryo E14.5.CNhs10578.420-27D216.77
whole body, embryo E14.CNhs10519.395-14B116.56
whole body, embryo E16.CNhs10514.453-14F29.93
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G511.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G510.10
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G57.38
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G58.34
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G58.87
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G59.05
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G58.62
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G59.48
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G59.25
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G511.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G510.31
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G59.84
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G59.07
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G512.07
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G59.26
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G510.12
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G56.68
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G59.30
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G510.54
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G511.17
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G510.61
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G59.47
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G511.95
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G511.78
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G58.78
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G58.96
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G57.78
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G59.76
whole body, embryo E17.5.CNhs10513.490-9F910.80
whole body, embryo E17.CNhs10517.475-3I57.99
whole body, embryo E18.CNhs10516.493-3B37.95
whole body, neonate N00.CNhs10525.657-19C211.17
whole body, neonate N01.CNhs10576.659-23C62.49
whole body, neonate N06.CNhs10515.692-21D19.04
whole body, neonate N10.CNhs10518.761-6B46.96





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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