Personal tools

FFCP PHASE1:Mm9::chr13:118009544..118009561,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr13:118009544..118009561,+
|short_description=p1@Emb
|description=CAGE_peak_1_at_Emb_5end
|association_with_transcript=112bp_to_ENSMUST00000022242_5end
|EntrezGene=13723
|EntrezGene=13723
|HGNC=
|HGNC=
|UniProt=P21995
|UniProt=P21995
|association_with_transcript=112bp_to_ENSMUST00000022242_5end
|description=CAGE_peak_1_at_Emb_5end
|id=chr13:118009544..118009561,+
|ontology_enrichment_disease=
|phase1_expression=16.6554800988986,0,0,0,0,3.52546471014969,2.80335168714631,49.97072617189,140.788722151667,114.925682424099,22.6007718057667,16.2735204350486,261.937116794745,248.623624479629,14.6568295198892,14.5782192520675,11.8925519281785,40.3791571658544,39.351842444847,42.438965179803,34.6126190914854,54.8086050628887,127.987896678078,9.11956809922418,13.3057383018959,0,0,1.939241094173,3.23039813075836,6.04872311423834,8.86922042621219,8.25539875497521,8.61090702618398,31.6963362030877,0,0,0,719.037341606008,921.975706538085,728.745051611527,922.34697323263,883.17781205127,667.091225064805,125.770921157602,99.6535233887828,215.300340285652,10.9534788208725,1.52617609466313,14.7189742432096,23.7204476870626,9.79904951377538,12.9377307928474,16.6104779997159,761.630249111912,896.698256112094,1.54355661621568,12.8940047972441,4.12537673821954,2.02316460859598,2.11596391708813,0.633831403506179,1.35537812827653,3.55717918444456,69.2922782306677,56.3653826663175,71.7584916095561,8.08920298399693,6.53171119046643,1.8664130215526,0.540023753326763,0.841299845405528,6.28432165688368,4.19650227808066,1.83736198822431,1.72521847832825,0.919218786610021,11.0115880999389,10.4703617229854,9.21639199537461,1.58263545276233,2.74462930807229,1.04182674111352,13.6799669510677,15.1945904708554,14.8214300343506,4.41942878210502,2.42031857358475,4.84638559145781,31.274917846605,20.3287496687253,4.05810284182349,5.16254326188832,0,0,0,0,25.8417733042423,2.21559419351475,4.1565760736459,2.47337702157238,19.5772353489586,0,0,0,32.9066382337045,33.1901423772379,31.3425155909166,18.954524033364,120.147178012288,13.0629082377046,69.2206453796882,147.056826024764,138.830529348147,125.85340486144,79.0196111951936,66.980293178717,5.93267922562497,30.3658649531814,85.8072235391378,39.3093445372204,63.6023573165933,60.1245313887675,11.1835056730873,29.2780797011547,18.850203613211,9.96282515313506,460.808968849769,700.086487069307,581.854569767563,30.407499799179,10.5225138648284,0.753926112677186,10.9509321721134,9.71718737855256,21.4021685896347,14.6017136760982,11.6096874789361,97.5350649583129,164.775238498756,41.8779293214083,28.2361361229067,27.3583504275833,26.829257340997,24.7155901250573,30.6164246180975,29.7223831060852,28.2042190924784,48.6362336989349,16.1675994699632,7.18603104637713,5.45448484908241,7.01426343768239,8.34141747676794,9.75106066262066,12.9642745937004,10.9468846750171,1010.48477654374,621.495195682037,513.767606907231,9.94203708170409,11.7263029990548,6.48223421259654,3.31442629819294,4.52557733019029,4.78228049950873,2.09280550275367,2.68273401399619,4.32031766758527,1.48103864922132,5.08919138645195,3.97237166774693,3.94739966048397,5.70830299756732,5.90508242545636,23.3421842906181,12.1427442607556,9.25172592354634,8.99131926656051,11.5175655289026,7.89604684325491,6.44337306610467,6.45387278794696,3.55804870151792,4.1849637744763,5.21981967698963,4.11747386810027,4.77536896720512,4.37704238490532,5.45899443933536,2.69645822596266,4.97117514711797,7.56736838366595,12.5180814629034,25.0204242615306,37.1935527721165,21.1797380959127,22.8863934857798,28.8959577948112,23.9034110329693,25.97938604441,38.3076895932954,49.9758513883292,0.592905254174298,15.6834399373128,16.9040735797355,28.3326261604916,30.0232979654984,29.1824363300424,33.8652382869288,29.0573098825319,28.3736646856312,17.0228076176611,14.3768206527355,13.3970741160661,4.99260276983297,2.02063102357689,0.717589654087649,1.92977408545347,152.051875507116,6.82169082373745,4.56301934037672,8.31750920298422,10.5610611729826,15.410575684647,43.3239426412545,72.5897170031012,53.5959489961049,57.1378899293839,61.3900859331325,99.465032032453,103.09293417394,139.875639648322,262.376834054334,195.262140490917,7.86822836830458,25.6621174063401,30.0229603277171,30.7094618871572,95.0822683184717,12.876017287423,57.1069877143425,53.4901079686395,24.9891141370047,20.5513166239195,14.4819138153556,9.34152551603147,44.5291771842384,43.2538669708742,39.5287777946523,8.67567554338879,172.17332335763,4.09550888434687,7.4928001302645,147.813230183392,7.96470830039777,39.087682420952,29.3253850255809,26.4047111658257,22.4429438589387,25.2096821314021,23.0001180919717,23.2661586865604,14.6163925137736,8.84902922220285,6.32511651449993,7.21948802737308,205.965961481042,30.6103859853227,24.0607151835923,37.7233181655602,48.7685642516252,84.9035571785856,94.1220397844132,74.2894475839622,65.7080782578389,43.4255745270831,10.3648347085832,73.8690413177831,12.9171541356724,9.16756458907969,12.5340961203293,20.1893306686425,5.24665505933731,27.0720940935344,50.5777807161644,85.2377764688109,82.5967592068914,24.2995309536051,12.7125631780553,20.3612574153805,272.815380140138,294.737758593624,261.197950490361,10.5013767981662,15.8167996790568,10.5726122905961,8.2084059024569,6.48173717644853,6.11415178489297,9.03591120778299,8.34799902825893,10.2084817373772,5.70305882483889,53.4351809254756,4.50954350947352,8.82147621659475,8.43838301331198,8.36140109879405,9.81614658430756,14.1923145412254,11.6183666259296,12.4996209450192,2.72634295506848,24.3999962034266,31.3952706821073,24.9648785296261,23.516124973659,23.3153872764158,28.5825810551149,25.2427640891149,30.1995659267523,24.6400671515936,24.0733929294561,21.202954489111,21.18549225009,20.7701941381891,22.8051440931021,21.3590288441531,30.0373638606632,20.8591952925994,18.2028481766733,104.875498376477,35.5915386691846,11.204996453867,344.021977502017,108.242609941954,52.7346212534502,8.02515366456581,5.64751842617067,6.90487854760765,9.16632821503035,6.70227411140382,8.90607275701835,6.7985450765073,5.40018000185445,9.45674526770863,15.406841905463,11.9084871702919,5.29315472679301,15.1629451892392,8.70741389346084,16.7743634777123,7.33646069197938,6.43452279575049,9.55660929546946,9.88968274746692,17.6505565275498,12.3821633764261,14.1948407938534,13.7697229211836,12.735245015904,9.21962194630118,10.5106908188772,16.6702791949076,12.051969898265,13.8894638733868,17.7196937345422,12.217510371155,15.4291163573437,13.8431128804283,13.5908628269973,14.0986024133359,9.78737556319438,11.3383574574847,13.5366699925852,11.8381370147029,11.4075455630524,11.2228454331548,11.5075967580449,11.3280154731898,10.6400071224119,10.8455788830176,13.3105561576988,13.4897712086491,17.778802241851,21.4871054048298,19.1288332068843,26.0297874561028,23.8823870689034
|phase1_expression=16.6554800988986,0,0,0,0,3.52546471014969,2.80335168714631,49.97072617189,140.788722151667,114.925682424099,22.6007718057667,16.2735204350486,261.937116794745,248.623624479629,14.6568295198892,14.5782192520675,11.8925519281785,40.3791571658544,39.351842444847,42.438965179803,34.6126190914854,54.8086050628887,127.987896678078,9.11956809922418,13.3057383018959,0,0,1.939241094173,3.23039813075836,6.04872311423834,8.86922042621219,8.25539875497521,8.61090702618398,31.6963362030877,0,0,0,719.037341606008,921.975706538085,728.745051611527,922.34697323263,883.17781205127,667.091225064805,125.770921157602,99.6535233887828,215.300340285652,10.9534788208725,1.52617609466313,14.7189742432096,23.7204476870626,9.79904951377538,12.9377307928474,16.6104779997159,761.630249111912,896.698256112094,1.54355661621568,12.8940047972441,4.12537673821954,2.02316460859598,2.11596391708813,0.633831403506179,1.35537812827653,3.55717918444456,69.2922782306677,56.3653826663175,71.7584916095561,8.08920298399693,6.53171119046643,1.8664130215526,0.540023753326763,0.841299845405528,6.28432165688368,4.19650227808066,1.83736198822431,1.72521847832825,0.919218786610021,11.0115880999389,10.4703617229854,9.21639199537461,1.58263545276233,2.74462930807229,1.04182674111352,13.6799669510677,15.1945904708554,14.8214300343506,4.41942878210502,2.42031857358475,4.84638559145781,31.274917846605,20.3287496687253,4.05810284182349,5.16254326188832,0,0,0,0,25.8417733042423,2.21559419351475,4.1565760736459,2.47337702157238,19.5772353489586,0,0,0,32.9066382337045,33.1901423772379,31.3425155909166,18.954524033364,120.147178012288,13.0629082377046,69.2206453796882,147.056826024764,138.830529348147,125.85340486144,79.0196111951936,66.980293178717,5.93267922562497,30.3658649531814,85.8072235391378,39.3093445372204,63.6023573165933,60.1245313887675,11.1835056730873,29.2780797011547,18.850203613211,9.96282515313506,460.808968849769,700.086487069307,581.854569767563,30.407499799179,10.5225138648284,0.753926112677186,10.9509321721134,9.71718737855256,21.4021685896347,14.6017136760982,11.6096874789361,97.5350649583129,164.775238498756,41.8779293214083,28.2361361229067,27.3583504275833,26.829257340997,24.7155901250573,30.6164246180975,29.7223831060852,28.2042190924784,48.6362336989349,16.1675994699632,7.18603104637713,5.45448484908241,7.01426343768239,8.34141747676794,9.75106066262066,12.9642745937004,10.9468846750171,1010.48477654374,621.495195682037,513.767606907231,9.94203708170409,11.7263029990548,6.48223421259654,3.31442629819294,4.52557733019029,4.78228049950873,2.09280550275367,2.68273401399619,4.32031766758527,1.48103864922132,5.08919138645195,3.97237166774693,3.94739966048397,5.70830299756732,5.90508242545636,23.3421842906181,12.1427442607556,9.25172592354634,8.99131926656051,11.5175655289026,7.89604684325491,6.44337306610467,6.45387278794696,3.55804870151792,4.1849637744763,5.21981967698963,4.11747386810027,4.77536896720512,4.37704238490532,5.45899443933536,2.69645822596266,4.97117514711797,7.56736838366595,12.5180814629034,25.0204242615306,37.1935527721165,21.1797380959127,22.8863934857798,28.8959577948112,23.9034110329693,25.97938604441,38.3076895932954,49.9758513883292,0.592905254174298,15.6834399373128,16.9040735797355,28.3326261604916,30.0232979654984,29.1824363300424,33.8652382869288,29.0573098825319,28.3736646856312,17.0228076176611,14.3768206527355,13.3970741160661,4.99260276983297,2.02063102357689,0.717589654087649,1.92977408545347,152.051875507116,6.82169082373745,4.56301934037672,8.31750920298422,10.5610611729826,15.410575684647,43.3239426412545,72.5897170031012,53.5959489961049,57.1378899293839,61.3900859331325,99.465032032453,103.09293417394,139.875639648322,262.376834054334,195.262140490917,7.86822836830458,25.6621174063401,30.0229603277171,30.7094618871572,95.0822683184717,12.876017287423,57.1069877143425,53.4901079686395,24.9891141370047,20.5513166239195,14.4819138153556,9.34152551603147,44.5291771842384,43.2538669708742,39.5287777946523,8.67567554338879,172.17332335763,4.09550888434687,7.4928001302645,147.813230183392,7.96470830039777,39.087682420952,29.3253850255809,26.4047111658257,22.4429438589387,25.2096821314021,23.0001180919717,23.2661586865604,14.6163925137736,8.84902922220285,6.32511651449993,7.21948802737308,205.965961481042,30.6103859853227,24.0607151835923,37.7233181655602,48.7685642516252,84.9035571785856,94.1220397844132,74.2894475839622,65.7080782578389,43.4255745270831,10.3648347085832,73.8690413177831,12.9171541356724,9.16756458907969,12.5340961203293,20.1893306686425,5.24665505933731,27.0720940935344,50.5777807161644,85.2377764688109,82.5967592068914,24.2995309536051,12.7125631780553,20.3612574153805,272.815380140138,294.737758593624,261.197950490361,10.5013767981662,15.8167996790568,10.5726122905961,8.2084059024569,6.48173717644853,6.11415178489297,9.03591120778299,8.34799902825893,10.2084817373772,5.70305882483889,53.4351809254756,4.50954350947352,8.82147621659475,8.43838301331198,8.36140109879405,9.81614658430756,14.1923145412254,11.6183666259296,12.4996209450192,2.72634295506848,24.3999962034266,31.3952706821073,24.9648785296261,23.516124973659,23.3153872764158,28.5825810551149,25.2427640891149,30.1995659267523,24.6400671515936,24.0733929294561,21.202954489111,21.18549225009,20.7701941381891,22.8051440931021,21.3590288441531,30.0373638606632,20.8591952925994,18.2028481766733,104.875498376477,35.5915386691846,11.204996453867,344.021977502017,108.242609941954,52.7346212534502,8.02515366456581,5.64751842617067,6.90487854760765,9.16632821503035,6.70227411140382,8.90607275701835,6.7985450765073,5.40018000185445,9.45674526770863,15.406841905463,11.9084871702919,5.29315472679301,15.1629451892392,8.70741389346084,16.7743634777123,7.33646069197938,6.43452279575049,9.55660929546946,9.88968274746692,17.6505565275498,12.3821633764261,14.1948407938534,13.7697229211836,12.735245015904,9.21962194630118,10.5106908188772,16.6702791949076,12.051969898265,13.8894638733868,17.7196937345422,12.217510371155,15.4291163573437,13.8431128804283,13.5908628269973,14.0986024133359,9.78737556319438,11.3383574574847,13.5366699925852,11.8381370147029,11.4075455630524,11.2228454331548,11.5075967580449,11.3280154731898,10.6400071224119,10.8455788830176,13.3105561576988,13.4897712086491,17.778802241851,21.4871054048298,19.1288332068843,26.0297874561028,23.8823870689034
|short_description=p1@Emb
}}
}}

Revision as of 19:22, 17 April 2012

Short description:p1@Emb
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Emb_5end
Coexpression cluster:NA
Association with transcript: 112bp_to_ENSMUST00000022242_5end
EntrezGene:Emb
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Emb

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G716.66
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I73.53
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I82.80
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E949.97
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E7140.79
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F2114.93
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E622.60
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F116.27
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E4261.94
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E8248.62
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A114.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A314.58
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A511.89
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A240.38
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A439.35
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A642.44
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A334.61
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H254.81
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I9127.99
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D19.12
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D213.31
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I21.94
Ileum epithelium, pool1.CNhs13199.10252-104B93.23
Ileum epithelium, pool2.CNhs13232.10253-104C16.05
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C88.87
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I38.26
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G68.61
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E931.70
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G8719.04
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H1921.98
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H3728.75
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G9922.35
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H2883.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H4667.09
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D8125.77
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D999.65
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B3215.30
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B710.95
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.53
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B814.72
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C323.72
Mouse Astrocytes, donor2.CNhs12078.11552-120C49.80
Mouse Astrocytes, donor3.CNhs12107.11633-122C412.94
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A216.61
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I9761.63
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A1896.70
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.54
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E112.89
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C54.13
Mouse Granule cells, donor1.CNhs12131.11713-123C32.02
Mouse Granule cells, donor2.CNhs12357.11731-123E32.12
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.36
Mouse Meningeal cells, donor3.CNhs12109.11639-122D13.56
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C769.29
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E756.37
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D271.76
Mouse Microglia, donor1.CNhs12629.11718-123C88.09
Mouse Microglia, donor2.CNhs12634.11736-123E86.53
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.87
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.54
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.84
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F16.28
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D54.20
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.84
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.73
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D311.01
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F310.47
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D79.22
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.58
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.74
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E413.68
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E515.19
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I614.82
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D64.42
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.42
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E14.85
Mouse Schwann, donor1.CNhs12507.11728-123D931.27
Mouse Schwann, donor2.CNhs12573.11746-123F920.33
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G34.06
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F75.16
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A725.84
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I72.22
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E34.16
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I82.47
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G619.58
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G132.91
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G233.19
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G331.34
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B618.95
accessory axillary lymph node, adult.CNhs10475.1063-29H9120.15
adrenal gland, adult.CNhs10508.49-24D713.06
adrenal gland, embryo E14.CNhs11038.406-44C569.22
adrenal gland, embryo E16.CNhs11004.1254-43D6147.06
adrenal gland, embryo E17.CNhs11043.1263-45I1138.83
adrenal gland, embryo E18.CNhs11026.1262-18F5125.85
adrenal gland, neonate N00.CNhs11191.1311-23C179.02
adrenal gland, neonate N25.CNhs11223.1377-27I366.98
amnion, adult pregnant day17.5.CNhs10488.583-22A85.93
aorta, adult.CNhs10498.46-23H130.37
bone (os femoris), adult.CNhs10483.56-12G285.81
bone (os femoris), neonate N02.CNhs11227.1985-43F539.31
bone (os femoris), neonate N16.CNhs11225.1525-43A663.60
bone (os femoris), neonate N20.CNhs11195.1350-25C360.12
cecum, adult.CNhs10467.37-13H411.18
cerebellum, adult.CNhs10494.15-8B229.28
cerebellum, neonate N30.CNhs11135.1395-42I218.85
colon, adult.CNhs10468.36-18H79.96
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C7460.81
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D1700.09
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D4581.85
corpora quadrigemina, adult.CNhs10501.16-22A430.41
corpus striatum, adult.CNhs10487.19-21D810.52
corpus striatum, neonate N00.CNhs11226.630-43F10.75
cortex, adult.CNhs10473.12-14D510.95
cortex, neonate N30.CNhs11107.1392-42F29.72
diencephalon, adult.CNhs10482.20-12F221.40
diencephalon, neonate N30.CNhs11201.1388-42B214.60
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B111.61
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A297.54
epididymis, adult.CNhs10490.58-23B2164.78
eyeball, adult.CNhs10484.31-12G441.88
eyeball, embryo E12.CNhs11016.345-16C628.24
eyeball, embryo E14.CNhs10521.399-16E227.36
eyeball, embryo E15.CNhs10593.426-16C926.83
eyeball, embryo E17.CNhs11023.1261-18D424.72
eyeball, neonate N00.CNhs11207.633-15C630.62
eyeball, neonate N01.CNhs11140.1532-43E729.72
eyeball, neonate N02.CNhs11205.1551-44G828.20
eyeball, neonate N16.CNhs11188.777-19A248.64
forelimb, embryo E11.CNhs10596.335-25E216.17
forelimb, embryo E12.CNhs10600.359-14H27.19
forelimb, embryo E13.CNhs10589.384-1E25.45
forelimb, embryo E14.CNhs10577.413-26A87.01
forelimb, embryo E15.CNhs11007.437-20E78.34
forelimb, embryo E17.CNhs10598.1517-43C49.75
forelimb, embryo E18.CNhs11008.1520-43B512.96
gonad, embryo E13.CNhs11044.1564-45I610.95
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C81010.48
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D2621.50
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D5513.77
heart, embryo E11.CNhs10586.331-24E99.94
heart, embryo E12.CNhs11015.353-12F511.73
heart, embryo E13.CNhs11013.376-3I96.48
heart, embryo E14.CNhs10597.403-26D43.31
heart, embryo E15.CNhs11017.431-16C84.53
heart, embryo E16.CNhs11021.457-17C64.78
heart, embryo E17.CNhs11025.479-18E52.09
heart, embryo E18.CNhs11030.1283-20G32.68
heart, neonate N00.CNhs11213.639-21E34.32
heart, neonate N03.CNhs11221.1349-25I21.48
heart, neonate N10.CNhs11118.749-24G15.09
heart, neonate N16.CNhs11209.782-15G13.97
heart, neonate N20.CNhs11127.821-26I63.95
heart, neonate N25.CNhs11196.1351-25D35.71
heart, neonate N30.CNhs11202.1390-42D25.91
hippocampus, adult.CNhs10478.13-16E823.34
hippocampus, neonate N00.CNhs11228.627-43G112.14
intestinal mucosa, adult.CNhs10506.860-29I39.25
intestine, adult.CNhs10496.178-9A38.99
intestine, embryo E12.CNhs11019.1251-16I511.52
intestine, embryo E13.CNhs11010.381-16D57.90
intestine, embryo E15.CNhs10602.976-16D86.44
intestine, embryo E16.CNhs10585.463-22H46.45
intestine, embryo E17.CNhs10582.482-18D33.56
intestine, embryo E18.CNhs10526.1289-20F74.18
intestine, neonate N00.CNhs11126.644-26D15.22
intestine, neonate N01.CNhs11192.1322-23E94.12
intestine, neonate N06.CNhs11102.688-20B84.78
intestine, neonate N07.CNhs11095.720-20F24.38
intestine, neonate N10.CNhs11098.755-23A55.46
intestine, neonate N20.CNhs11187.827-18D12.70
intestine, neonate N25.CNhs11121.1352-25E34.97
intestine, neonate N30.CNhs11131.1384-42G17.57
kidney, embryo E14.CNhs10606.411-4I912.52
kidney, embryo E15.CNhs10997.434-16F825.02
kidney, embryo E16.CNhs10584.464-22A537.19
kidney, embryo E17.CNhs11028.483-18I221.18
kidney, embryo E18.CNhs11001.1288-20C722.89
kidney, neonate N00.CNhs11214.646-21G728.90
kidney, neonate N10.CNhs11206.758-6D523.90
kidney, neonate N20.CNhs11113.832-19I125.98
kidney, neonate N25.CNhs11122.1353-25F338.31
kidney, neonate N30.CNhs11203.1385-42H149.98
liver, adult pregnant day01.CNhs10466.508-5B20.59
liver, embryo E12.CNhs10601.355-15F815.68
liver, embryo E13.CNhs10524.378-3H616.90
liver, embryo E14.CNhs10594.409-16E128.33
liver, embryo E15.CNhs10520.433-16D730.02
liver, embryo E16.CNhs10523.462-17F529.18
liver, embryo E17.CNhs10510.481-18A333.87
liver, embryo E18.CNhs10579.499-43G429.06
liver, neonate N00.CNhs11117.641-24F428.37
liver, neonate N03.CNhs11123.1345-25G217.02
liver, neonate N06.CNhs11101.684-20A814.38
liver, neonate N07.CNhs11103.716-20H213.40
liver, neonate N10.CNhs11115.751-24B94.99
liver, neonate N20.CNhs11220.823-25A32.02
liver, neonate N25.CNhs11198.1368-26H10.72
liver, neonate N30.CNhs11106.1382-42D11.93
lung, adult.CNhs10474.28-22B1152.05
lung, embryo E12.CNhs10522.354-16G26.82
lung, embryo E14.CNhs10604.404-26F84.56
lung, embryo E15.CNhs11020.432-17C58.32
lung, embryo E16.CNhs10998.458-17B610.56
lung, embryo E17.CNhs10605.480-44A615.41
lung, embryo E18.CNhs10583.1287-20I643.32
lung, neonate N00.CNhs11224.640-42C672.59
lung, neonate N06.CNhs11212.683-20E553.60
lung, neonate N07.CNhs11111.715-19A357.14
lung, neonate N10.CNhs11219.750-23E661.39
lung, neonate N20.CNhs11109.822-18A499.47
lung, neonate N25.CNhs11119.1359-25C7103.09
lung, neonate N30.CNhs11133.1394-42H2139.88
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A1262.38
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A1195.26
mammary gland, adult lactating day02.CNhs10480.595-22B67.87
mammary gland, adult pregnant day19.CNhs10476.588-5H225.66
medulla oblongata, adult.CNhs10477.17-12C230.02
medulla oblongata, neonate N30.CNhs11200.1396-42A330.71
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C795.08
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C212.88
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E157.11
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E253.49
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E324.99
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D720.55
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D814.48
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D99.34
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D444.53
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D543.25
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D639.53
olfactory brain, adult.CNhs10489.18-22I98.68
ovary, adult.CNhs10507.91-2I7172.17
ovary, embryo E18.CNhs11040.505-44H74.10
ovary, neonate N00.CNhs11217.1299-22I47.49
oviduct, adult pregnant day01.CNhs10500.988-6G6147.81
pancreas, adult.CNhs10486.34-16E47.96
pancreas, embryo E14.CNhs11012.405-44F439.09
pancreas, embryo E15.CNhs11042.1556-45F229.33
pancreas, embryo E16.CNhs11003.460-26E526.40
pancreas, embryo E17.CNhs10599.1558-45G322.44
pancreas, embryo E18.CNhs10580.1535-43I725.21
pancreas, neonate N00.CNhs11105.645-26G923.00
pancreas, neonate N01.CNhs11138.1531-43D723.27
pancreas, neonate N02.CNhs11139.1539-43D814.62
pancreas, neonate N16.CNhs11136.787-43B68.85
pancreas, neonate N25.CNhs11094.1555-45E26.33
pancreas, neonate N30.CNhs11182.1548-44H57.22
pituitary gland, adult.CNhs10493.21-1G8205.97
pituitary gland, embryo E12.CNhs11018.346-16E630.61
pituitary gland, embryo E13.CNhs11009.370-44C724.06
pituitary gland, embryo E14.CNhs11037.398-44A537.72
pituitary gland, embryo E15.CNhs10592.427-16B948.77
pituitary gland, embryo E16.CNhs11036.449-43F684.90
pituitary gland, embryo E17.CNhs11039.1265-44F594.12
pituitary gland, neonate N00.CNhs11190.1308-22E974.29
placenta, adult pregnant day10.CNhs10472.539-13I765.71
placenta, adult pregnant day17.CNhs10464.577-18G343.43
prostate, adult.CNhs10470.859-1F810.36
skin, adult.CNhs10492.30-1C373.87
skin, neonate N00.CNhs11124.650-25G412.92
skin, neonate N03.CNhs11215.662-22H39.17
skin, neonate N06.CNhs11097.693-20I512.53
skin, neonate N10.CNhs11108.762-6C420.19
small intestine, neonate N16.CNhs11114.790-21I15.25
spinal cord, adult.CNhs10505.24-13C927.07
spleen, adult.CNhs10465.25-2G250.58
spleen, embryo E16.CNhs11035.461-43C185.24
spleen, embryo E18.CNhs11011.1271-21F282.60
spleen, neonate N10.CNhs11116.752-24D124.30
spleen, neonate N20.CNhs11112.824-19H112.71
spleen, neonate N25.CNhs11099.1354-25G320.36
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C6272.82
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C9294.74
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D3261.20
stomach, adult.CNhs10503.33-1H610.50
stomach, embryo E12.CNhs10588.356-43E315.82
stomach, embryo E15.CNhs10603.1252-16G810.57
stomach, embryo E16.CNhs11022.459-17D48.21
stomach, embryo E17.CNhs11006.1035-18D56.48
stomach, embryo E18.CNhs10999.1286-20C66.11
stomach, neonate N03.CNhs11193.1340-24B89.04
stomach, neonate N07.CNhs11210.718-18A98.35
stomach, neonate N25.CNhs11104.1355-25E410.21
stomach, neonate N30.CNhs11134.1386-42I15.70
submandibular gland, adult.CNhs10469.59-29C153.44
testis, adult.CNhs10504.57-7G54.51
testis, embryo E13.CNhs11031.389-23F58.82
testis, embryo E15.CNhs11034.443-27C58.44
testis, embryo E16.CNhs11033.470-26G58.36
testis, embryo E17.CNhs11029.486-18I59.82
testis, embryo E18.CNhs11027.503-18G514.19
testis, neonate N00.CNhs11189.1300-22B711.62
testis, neonate N07.CNhs11222.726-26I412.50
testis, neonate N10.CNhs11204.763-44D92.73
testis, neonate N20.CNhs11110.839-18H324.40
testis, neonate N30.CNhs11130.1391-42E231.40
thymus, adult.CNhs10471.38-12B524.96
thymus, embryo E14.CNhs11041.402-44I423.52
thymus, embryo E15.CNhs11005.430-45I223.32
thymus, embryo E16.CNhs11002.456-26C528.58
thymus, embryo E17.CNhs10581.478-18C125.24
thymus, embryo E18.CNhs10595.1273-19G430.20
thymus, neonate N02.CNhs11181.1541-43F824.64
thymus, neonate N03.CNhs11137.2104-43C724.07
thymus, neonate N06.CNhs11197.681-26C421.20
thymus, neonate N07.CNhs11211.713-19D321.19
thymus, neonate N10.CNhs11194.748-24E420.77
thymus, neonate N20.CNhs11186.820-7A222.81
thymus, neonate N25.CNhs11125.1362-25G721.36
thymus, neonate N30.CNhs11132.1393-42G230.04
tongue, adult.CNhs10499.32-1B420.86
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H318.20
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F7104.88
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G535.59
urinary bladder, adult.CNhs10481.879-12E411.20
uterus, adult pregnant day19.CNhs10497.590-15F5344.02
uterus, adult.CNhs10509.92-27E5108.24
vagina, adult.CNhs10502.89-27D552.73
vesicular gland, adult.CNhs10491.51-27F88.03
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A15.65
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A26.90
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A39.17
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D76.70
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A48.91
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A56.80
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A65.40
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A79.46
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A815.41
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A911.91
whole body, embryo E11.CNhs11014.324-5I85.29
whole body, embryo E12.CNhs10587.857-27C915.16
whole body, embryo E13.CNhs10512.372-23H28.71
whole body, embryo E14.5.CNhs10578.420-27D216.77
whole body, embryo E14.CNhs10519.395-14B17.34
whole body, embryo E16.CNhs10514.453-14F26.43
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G59.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G59.89
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G517.65
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G512.38
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G514.19
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G513.77
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G512.74
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G59.22
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G510.51
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G516.67
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G512.05
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G513.89
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G517.72
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G512.22
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G515.43
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G513.84
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G513.59
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G514.10
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G59.79
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G511.34
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G513.54
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G511.84
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G511.41
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G511.22
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G511.51
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G511.33
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G510.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G510.85
whole body, embryo E17.5.CNhs10513.490-9F913.31
whole body, embryo E17.CNhs10517.475-3I513.49
whole body, embryo E18.CNhs10516.493-3B317.78
whole body, neonate N00.CNhs10525.657-19C221.49
whole body, neonate N01.CNhs10576.659-23C619.13
whole body, neonate N06.CNhs10515.692-21D126.03
whole body, neonate N10.CNhs10518.761-6B423.88





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr13:118009544..118009561,%2B&oldid=752093"