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FFCP PHASE1:Mm9::chr13:23636327..23636345,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr13:23636327..23636345,+
|short_description=p3@Hist1h3e,p3@Hist1h3f,p3@Hist2h3c1,p3@Hist2h3c2-ps,p4@Hist1h3b,p4@Hist1h3c,p4@Hist1h3d,p4@Hist2h3b
|description=CAGE_peak_3_at_Hist1h3e_5end,CAGE_peak_3_at_Hist1h3f_5end,CAGE_peak_3_at_Hist2h3c1_5end,CAGE_peak_3_at_Hist2h3c2-ps_5end,CAGE_peak_4_at_Hist1h3b_5end,CAGE_peak_4_at_Hist1h3c_5end,CAGE_peak_4_at_Hist1h3d_5end,CAGE_peak_4_at_Hist2h3b_5end
|association_with_transcript=406bp_to_ENSMUST00000075558,NM_013548,uc007ptz.2_5end
|EntrezGene=15077,260423,319148,319149,319150,319151,319154,97114
|EntrezGene=15077,260423,319148,319149,319150,319151,319154,97114
|HGNC=
|HGNC=
|UniProt=P84228,B9EI85
|UniProt=P84228,B9EI85
|association_with_transcript=406bp_to_ENSMUST00000075558,NM_013548,uc007ptz.2_5end
|description=CAGE_peak_3_at_Hist1h3e_5end,CAGE_peak_3_at_Hist1h3f_5end,CAGE_peak_3_at_Hist2h3c1_5end,CAGE_peak_3_at_Hist2h3c2-ps_5end,CAGE_peak_4_at_Hist1h3b_5end,CAGE_peak_4_at_Hist1h3c_5end,CAGE_peak_4_at_Hist1h3d_5end,CAGE_peak_4_at_Hist2h3b_5end
|id=chr13:23636327..23636345,+
|ontology_enrichment_disease=
|phase1_expression=191.538021137334,93.5254092473488,74.6198752598839,38.1104906246606,69.1236107325959,277.000798654618,234.780703798503,97.4881091983901,21.8222519335083,28.3218076849612,33.7299397404245,36.6154209788594,64.7138759139958,76.4928521166227,1829.77192165344,3207.81566125701,5455.18352564329,184.860828899927,168.513638901453,548.311430123055,55.9584849194039,636.454997197675,631.319890348807,227.669217635018,340.902191665815,230.841249574238,297.225777349762,249.731158682945,230.878454639494,439.036486041799,554.769737659572,7608.9375293933,5199.14264945237,8954.21497737229,772.389231214908,1246.26113625262,900.386861117048,1800.10454379944,2958.91694971163,1431.83743976834,1236.46258784119,1884.52249300035,1005.97745148055,53.6320444575959,39.7397570380497,37.9941776974681,201.856966841794,231.978766388795,50.308135846194,29.9422044574396,96.1706716566241,133.689884859424,176.003953754565,96.4731648875088,82.0068869907612,96.4722885134801,68.4814921453629,36.097046459421,148.095649349226,139.124627548545,147.68271701694,215.166277863899,216.098635455007,76.9414258275596,115.697364420336,105.151057012023,227.096883772951,239.75222252065,267.00075169433,408.392963453364,381.739804852758,108.547374073445,103.808214247258,476.121736548526,437.151193314176,309.776731087577,29.731287869835,12.896421146604,9.06278546211836,98.1233980712642,69.6220967814337,101.578107258568,18.1468949350898,23.6360296213306,16.8078072554491,124.922520240835,71.3282120803506,76.7965716800238,24.2323818666189,117.740490646372,70.4370707545077,47.3233132339763,3.39985666853875,11.873470216032,14.2950811838487,9.85659151614138,113.759980306719,207.413702577496,381.106068752408,265.358020457266,176.899335239511,75.7126216744475,10.1922095882658,7.11066703153331,874.623805685305,699.779948442222,702.173454125534,108.588869612826,57.2252722860249,16.7739617143252,465.287646386776,375.710400237182,219.545953387768,142.432895322228,78.6668450737865,34.1813128416717,9.39340877390621,12.7247434089522,575.881469319368,183.605374690309,436.382840477738,586.699056293619,72.6927868750676,5.85561594023094,8.3778682725382,121.853015334498,4404.04453146411,3808.18253634615,3129.48555235544,5.99162557619291,11.8950156732843,55.1622605775475,10.7771078519211,5.8814555185976,9.97382613885888,10.5456820994042,176.793135644149,407.308421777445,39.9301958325206,17.2562321826909,477.151664344235,754.998510959525,374.709292124932,409.917104513145,267.315405165567,359.743326559858,322.802441108266,12.6764651662118,641.530346968138,343.038429424424,239.997333359626,327.916815711652,242.179154075496,128.505049446679,132.729477983124,328.605574517332,1391.08432406752,1643.9384306488,1959.8756553314,257.043083716558,305.352930095387,234.26074196078,155.304546543898,172.365467010726,205.020993027326,165.56416866229,151.574471790785,96.9152341647507,56.6085883702373,47.2802296547794,17.5108628619048,20.1755982646959,27.2242142960903,29.3912057085214,12.6173969138476,44.0431740983337,17.5121954981413,141.216602598333,458.996315151823,429.637842941811,250.904947194116,160.338402075557,138.541521315354,159.409074682325,169.881404032935,93.0549094190661,130.44297336734,145.23822459004,92.2180132073438,119.542981351011,133.789452872436,95.5878111620963,639.749829914745,405.582219764537,247.957018480777,326.453078536039,227.11836247329,117.828177415735,70.1925562079256,23.7652338247159,29.3587621063371,29.6153193412321,16.6013471168803,749.301369770978,905.1541724963,941.497664555383,1233.3895380421,1146.79739462274,1251.99531320924,803.535311900114,744.200690897412,626.549144895202,189.774032616108,219.563159124417,89.8668498569934,26.2682033064996,49.3342887185259,11.0962009913574,40.2761954563198,683.874505079679,363.085967512834,596.484231414011,444.033949761846,184.424389443439,84.0294052327629,26.3430424608028,87.0145995466174,129.999772823831,42.5744232315491,23.2685906896348,34.8823663369109,46.8662949804097,25.6345182696763,48.4076058598651,64.4211197654937,47.1851836181093,6.74312477948726,6.32943107597897,377.21430931173,48.2219470960352,262.187330334909,253.785183792815,159.844161117737,129.521088490283,114.741317152433,119.458295992887,165.972387686707,101.120526837314,86.1727355923421,17.3513510867776,47.6918686299783,292.205655617966,160.932315841333,33.6539050863972,23.8941249011933,733.925863096509,444.717952295149,265.555952296305,167.731475156279,99.9164230817764,82.955482106999,152.684166380552,171.475239003051,58.466800218126,44.2758156014995,40.2228618667929,21.1072555567349,459.155789779841,394.543985537401,244.98723104111,105.517439017153,194.778748821461,119.956236018946,281.32561298189,107.244970585116,21.8187032989735,17.642271844397,47.4872408471463,76.3726738271633,132.869373616727,214.392729829633,131.969283395029,107.847909553045,7.04616147639937,983.874531634036,481.087789222272,723.184629378724,2354.79408101564,1461.5346827932,1117.12381976745,1158.91293569811,1360.32811658596,1307.50995216365,1.90934123603023,355.561656785196,235.240623465764,305.871125207341,209.088296014469,177.528764325642,150.643474911845,90.6708409306935,49.9953849189497,86.3235722123341,26.0962511496509,43.4043562786827,264.195736859711,391.143871440579,205.534906079658,404.011927838343,267.626502777393,219.223321790268,104.684325414536,45.1943774474814,65.7108808646736,29.0910306320444,474.016680942267,686.833029403076,601.578076114393,733.143204063697,530.814152654082,530.081854556415,723.456410660692,741.549115943552,640.531158471049,660.713013698849,601.125715785843,571.493012657908,533.398450053986,378.330532361739,20.8591952925994,258.391649727411,416.003153098139,173.760577936821,20.28490737338,47.483666289149,37.9123862233239,49.7334639463433,28.0880378259804,19.2015626489803,17.4923589872727,21.7700295106971,28.8713346337395,27.4033007908257,18.1294535373528,15.5255175053315,19.3638117386415,15.406841905463,22.7814537170801,989.197209824788,180.359242777266,401.223973522215,374.141237568105,792.966594221657,339.007429581826,195.132627009818,181.928955541944,163.989716101418,196.093036328707,199.741688313509,191.644362848253,263.319919005309,217.941618786175,202.976947289137,181.467896378851,166.062239078978,169.76011400806,147.11466658678,177.963494442486,234.522568631624,250.240886684666,220.553475701272,222.23467103083,223.415669105995,191.652086874647,171.037654636042,156.000338882641,237.385591002566,120.084446134756,132.278045208454,167.063602108956,135.455475289167,194.600672529573,216.634124131822,235.821185573421,150.418024230398,177.268619589846,65.4206095675444,267.136208553733,244.852434415165
|phase1_expression=191.538021137334,93.5254092473488,74.6198752598839,38.1104906246606,69.1236107325959,277.000798654618,234.780703798503,97.4881091983901,21.8222519335083,28.3218076849612,33.7299397404245,36.6154209788594,64.7138759139958,76.4928521166227,1829.77192165344,3207.81566125701,5455.18352564329,184.860828899927,168.513638901453,548.311430123055,55.9584849194039,636.454997197675,631.319890348807,227.669217635018,340.902191665815,230.841249574238,297.225777349762,249.731158682945,230.878454639494,439.036486041799,554.769737659572,7608.9375293933,5199.14264945237,8954.21497737229,772.389231214908,1246.26113625262,900.386861117048,1800.10454379944,2958.91694971163,1431.83743976834,1236.46258784119,1884.52249300035,1005.97745148055,53.6320444575959,39.7397570380497,37.9941776974681,201.856966841794,231.978766388795,50.308135846194,29.9422044574396,96.1706716566241,133.689884859424,176.003953754565,96.4731648875088,82.0068869907612,96.4722885134801,68.4814921453629,36.097046459421,148.095649349226,139.124627548545,147.68271701694,215.166277863899,216.098635455007,76.9414258275596,115.697364420336,105.151057012023,227.096883772951,239.75222252065,267.00075169433,408.392963453364,381.739804852758,108.547374073445,103.808214247258,476.121736548526,437.151193314176,309.776731087577,29.731287869835,12.896421146604,9.06278546211836,98.1233980712642,69.6220967814337,101.578107258568,18.1468949350898,23.6360296213306,16.8078072554491,124.922520240835,71.3282120803506,76.7965716800238,24.2323818666189,117.740490646372,70.4370707545077,47.3233132339763,3.39985666853875,11.873470216032,14.2950811838487,9.85659151614138,113.759980306719,207.413702577496,381.106068752408,265.358020457266,176.899335239511,75.7126216744475,10.1922095882658,7.11066703153331,874.623805685305,699.779948442222,702.173454125534,108.588869612826,57.2252722860249,16.7739617143252,465.287646386776,375.710400237182,219.545953387768,142.432895322228,78.6668450737865,34.1813128416717,9.39340877390621,12.7247434089522,575.881469319368,183.605374690309,436.382840477738,586.699056293619,72.6927868750676,5.85561594023094,8.3778682725382,121.853015334498,4404.04453146411,3808.18253634615,3129.48555235544,5.99162557619291,11.8950156732843,55.1622605775475,10.7771078519211,5.8814555185976,9.97382613885888,10.5456820994042,176.793135644149,407.308421777445,39.9301958325206,17.2562321826909,477.151664344235,754.998510959525,374.709292124932,409.917104513145,267.315405165567,359.743326559858,322.802441108266,12.6764651662118,641.530346968138,343.038429424424,239.997333359626,327.916815711652,242.179154075496,128.505049446679,132.729477983124,328.605574517332,1391.08432406752,1643.9384306488,1959.8756553314,257.043083716558,305.352930095387,234.26074196078,155.304546543898,172.365467010726,205.020993027326,165.56416866229,151.574471790785,96.9152341647507,56.6085883702373,47.2802296547794,17.5108628619048,20.1755982646959,27.2242142960903,29.3912057085214,12.6173969138476,44.0431740983337,17.5121954981413,141.216602598333,458.996315151823,429.637842941811,250.904947194116,160.338402075557,138.541521315354,159.409074682325,169.881404032935,93.0549094190661,130.44297336734,145.23822459004,92.2180132073438,119.542981351011,133.789452872436,95.5878111620963,639.749829914745,405.582219764537,247.957018480777,326.453078536039,227.11836247329,117.828177415735,70.1925562079256,23.7652338247159,29.3587621063371,29.6153193412321,16.6013471168803,749.301369770978,905.1541724963,941.497664555383,1233.3895380421,1146.79739462274,1251.99531320924,803.535311900114,744.200690897412,626.549144895202,189.774032616108,219.563159124417,89.8668498569934,26.2682033064996,49.3342887185259,11.0962009913574,40.2761954563198,683.874505079679,363.085967512834,596.484231414011,444.033949761846,184.424389443439,84.0294052327629,26.3430424608028,87.0145995466174,129.999772823831,42.5744232315491,23.2685906896348,34.8823663369109,46.8662949804097,25.6345182696763,48.4076058598651,64.4211197654937,47.1851836181093,6.74312477948726,6.32943107597897,377.21430931173,48.2219470960352,262.187330334909,253.785183792815,159.844161117737,129.521088490283,114.741317152433,119.458295992887,165.972387686707,101.120526837314,86.1727355923421,17.3513510867776,47.6918686299783,292.205655617966,160.932315841333,33.6539050863972,23.8941249011933,733.925863096509,444.717952295149,265.555952296305,167.731475156279,99.9164230817764,82.955482106999,152.684166380552,171.475239003051,58.466800218126,44.2758156014995,40.2228618667929,21.1072555567349,459.155789779841,394.543985537401,244.98723104111,105.517439017153,194.778748821461,119.956236018946,281.32561298189,107.244970585116,21.8187032989735,17.642271844397,47.4872408471463,76.3726738271633,132.869373616727,214.392729829633,131.969283395029,107.847909553045,7.04616147639937,983.874531634036,481.087789222272,723.184629378724,2354.79408101564,1461.5346827932,1117.12381976745,1158.91293569811,1360.32811658596,1307.50995216365,1.90934123603023,355.5616567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|short_description=p3@Hist1h3e,p3@Hist1h3f,p3@Hist2h3c1,p3@Hist2h3c2-ps,p4@Hist1h3b,p4@Hist1h3c,p4@Hist1h3d,p4@Hist2h3b
}}
}}

Revision as of 19:32, 17 April 2012

Short description:p3@Hist1h3e, p3@Hist1h3f, p3@Hist2h3c1, p3@Hist2h3c2-ps, p4@Hist1h3b, p4@Hist1h3c, p4@Hist1h3d, p4@Hist2h3b
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Hist1h3e_5end, CAGE_peak_3_at_Hist1h3f_5end, CAGE_peak_3_at_Hist2h3c1_5end, CAGE_peak_3_at_Hist2h3c2-ps_5end, CAGE_peak_4_at_Hist1h3b_5end, CAGE_peak_4_at_Hist1h3c_5end, CAGE_peak_4_at_Hist1h3d_5end, CAGE_peak_4_at_Hist2h3b_5end
Coexpression cluster:NA
Association with transcript: 406bp_to_ENSMUST00000075558, NM_013548, uc007ptz.2_5end
EntrezGene:15077,260423,319148,319149,319150,319151,319154,97114
Link to Zenbu:ZENBU


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CAGE Expression

Sample

p3@Hist1h3ep3@Hist1h3fp3@Hist2h3c1p3@Hist2h3c2-psp4@Hist1h3bp4@Hist1h3cp4@Hist1h3dp4@Hist2h3b

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G7191.54
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I593.53
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I674.62
CD326+ enterocyte, pool1.CNhs13542.11848-124I338.11
CD326+ enterocyte, pool2.CNhs13197.11849-124I469.12
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I7277.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I8234.78
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E997.49
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E721.82
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F228.32
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E633.73
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F136.62
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E464.71
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E876.49
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11829.77
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A33207.82
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A55455.18
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A2184.86
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A4168.51
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A6548.31
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A355.96
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H2636.45
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I9631.32
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D1227.67
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D2340.90
GP2+ M cell, pool1.CNhs13228.11845-124H9230.84
GP2+ M cell, pool2.CNhs13231.11846-124I1297.23
GP2+ M cell, pool3.CNhs13240.11847-124I2249.73
Ileum epithelium, pool1.CNhs13199.10252-104B9230.88
Ileum epithelium, pool2.CNhs13232.10253-104C1439.04
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C8554.77
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I37608.94
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G65199.14
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E98954.21
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F5772.39
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61246.26
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F7900.39
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G81800.10
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H12958.92
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31431.84
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91236.46
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H21884.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H41005.98
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D853.63
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D939.74
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B337.99
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B7201.86
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C2231.98
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B850.31
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C329.94
Mouse Astrocytes, donor2.CNhs12078.11552-120C496.17
Mouse Astrocytes, donor3.CNhs12107.11633-122C4133.69
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A2176.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I996.47
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A182.01
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C196.47
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E168.48
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C536.10
Mouse Granule cells, donor1.CNhs12131.11713-123C3148.10
Mouse Granule cells, donor2.CNhs12357.11731-123E3139.12
Mouse Granule cells, donor3.CNhs12108.11636-122C7147.68
Mouse Meningeal cells, donor1.CNhs12132.11716-123C6215.17
Mouse Meningeal cells, donor3.CNhs12109.11639-122D1216.10
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C776.94
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E7115.70
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D2105.15
Mouse Microglia, donor1.CNhs12629.11718-123C8227.10
Mouse Microglia, donor2.CNhs12634.11736-123E8239.75
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D5267.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F5408.39
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D9381.74
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F1108.55
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D5103.81
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D2476.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F2437.15
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D6309.78
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D329.73
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F312.90
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D79.06
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D498.12
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F469.62
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D8101.58
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E418.15
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E523.64
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I616.81
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D6124.92
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F671.33
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E176.80
Mouse Schwann, donor1.CNhs12507.11728-123D924.23
Mouse Schwann, donor2.CNhs12573.11746-123F9117.74
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G370.44
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F747.32
Mouse hepatocyte, donor1.CNhs13078.11714-123C43.40
Mouse hepatocyte, donor3.CNhs12615.11637-122C811.87
Mouse hepatocyte, donor6.CNhs13090.11822-124F414.30
Mouse hepatocyte, donor8.CNhs13091.11824-124F69.86
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A7113.76
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I7207.41
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E3381.11
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I8265.36
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G6176.90
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H175.71
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I810.19
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G1874.62
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G2699.78
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G3702.17
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B6108.59
accessory axillary lymph node, adult.CNhs10475.1063-29H957.23
adrenal gland, adult.CNhs10508.49-24D716.77
adrenal gland, embryo E14.CNhs11038.406-44C5465.29
adrenal gland, embryo E16.CNhs11004.1254-43D6375.71
adrenal gland, embryo E17.CNhs11043.1263-45I1219.55
adrenal gland, embryo E18.CNhs11026.1262-18F5142.43
adrenal gland, neonate N00.CNhs11191.1311-23C178.67
adrenal gland, neonate N25.CNhs11223.1377-27I334.18
amnion, adult pregnant day17.5.CNhs10488.583-22A89.39
aorta, adult.CNhs10498.46-23H112.72
bone (os femoris), adult.CNhs10483.56-12G2575.88
bone (os femoris), neonate N02.CNhs11227.1985-43F5183.61
bone (os femoris), neonate N16.CNhs11225.1525-43A6436.38
bone (os femoris), neonate N20.CNhs11195.1350-25C3586.70
cecum, adult.CNhs10467.37-13H472.69
cerebellum, adult.CNhs10494.15-8B25.86
cerebellum, neonate N30.CNhs11135.1395-42I28.38
colon, adult.CNhs10468.36-18H7121.85
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C74404.04
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D13808.18
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D43129.49
corpora quadrigemina, adult.CNhs10501.16-22A45.99
corpus striatum, adult.CNhs10487.19-21D811.90
corpus striatum, neonate N00.CNhs11226.630-43F155.16
cortex, adult.CNhs10473.12-14D510.78
cortex, neonate N30.CNhs11107.1392-42F25.88
diencephalon, adult.CNhs10482.20-12F29.97
diencephalon, neonate N30.CNhs11201.1388-42B210.55
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B1176.79
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A2407.31
epididymis, adult.CNhs10490.58-23B239.93
eyeball, adult.CNhs10484.31-12G417.26
eyeball, embryo E12.CNhs11016.345-16C6477.15
eyeball, embryo E14.CNhs10521.399-16E2755.00
eyeball, embryo E15.CNhs10593.426-16C9374.71
eyeball, embryo E17.CNhs11023.1261-18D4409.92
eyeball, neonate N00.CNhs11207.633-15C6267.32
eyeball, neonate N01.CNhs11140.1532-43E7359.74
eyeball, neonate N02.CNhs11205.1551-44G8322.80
eyeball, neonate N16.CNhs11188.777-19A212.68
forelimb, embryo E11.CNhs10596.335-25E2641.53
forelimb, embryo E12.CNhs10600.359-14H2343.04
forelimb, embryo E13.CNhs10589.384-1E2240.00
forelimb, embryo E14.CNhs10577.413-26A8327.92
forelimb, embryo E15.CNhs11007.437-20E7242.18
forelimb, embryo E17.CNhs10598.1517-43C4128.51
forelimb, embryo E18.CNhs11008.1520-43B5132.73
gonad, embryo E13.CNhs11044.1564-45I6328.61
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C81391.08
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21643.94
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51959.88
heart, embryo E11.CNhs10586.331-24E9257.04
heart, embryo E12.CNhs11015.353-12F5305.35
heart, embryo E13.CNhs11013.376-3I9234.26
heart, embryo E14.CNhs10597.403-26D4155.30
heart, embryo E15.CNhs11017.431-16C8172.37
heart, embryo E16.CNhs11021.457-17C6205.02
heart, embryo E17.CNhs11025.479-18E5165.56
heart, embryo E18.CNhs11030.1283-20G3151.57
heart, neonate N00.CNhs11213.639-21E396.92
heart, neonate N03.CNhs11221.1349-25I256.61
heart, neonate N10.CNhs11118.749-24G147.28
heart, neonate N16.CNhs11209.782-15G117.51
heart, neonate N20.CNhs11127.821-26I620.18
heart, neonate N25.CNhs11196.1351-25D327.22
heart, neonate N30.CNhs11202.1390-42D229.39
hippocampus, adult.CNhs10478.13-16E812.62
hippocampus, neonate N00.CNhs11228.627-43G144.04
intestinal mucosa, adult.CNhs10506.860-29I317.51
intestine, adult.CNhs10496.178-9A3141.22
intestine, embryo E12.CNhs11019.1251-16I5459.00
intestine, embryo E13.CNhs11010.381-16D5429.64
intestine, embryo E15.CNhs10602.976-16D8250.90
intestine, embryo E16.CNhs10585.463-22H4160.34
intestine, embryo E17.CNhs10582.482-18D3138.54
intestine, embryo E18.CNhs10526.1289-20F7159.41
intestine, neonate N00.CNhs11126.644-26D1169.88
intestine, neonate N01.CNhs11192.1322-23E993.05
intestine, neonate N06.CNhs11102.688-20B8130.44
intestine, neonate N07.CNhs11095.720-20F2145.24
intestine, neonate N10.CNhs11098.755-23A592.22
intestine, neonate N20.CNhs11187.827-18D1119.54
intestine, neonate N25.CNhs11121.1352-25E3133.79
intestine, neonate N30.CNhs11131.1384-42G195.59
kidney, embryo E14.CNhs10606.411-4I9639.75
kidney, embryo E15.CNhs10997.434-16F8405.58
kidney, embryo E16.CNhs10584.464-22A5247.96
kidney, embryo E17.CNhs11028.483-18I2326.45
kidney, embryo E18.CNhs11001.1288-20C7227.12
kidney, neonate N00.CNhs11214.646-21G7117.83
kidney, neonate N10.CNhs11206.758-6D570.19
kidney, neonate N20.CNhs11113.832-19I123.77
kidney, neonate N25.CNhs11122.1353-25F329.36
kidney, neonate N30.CNhs11203.1385-42H129.62
liver, adult pregnant day01.CNhs10466.508-5B216.60
liver, embryo E12.CNhs10601.355-15F8749.30
liver, embryo E13.CNhs10524.378-3H6905.15
liver, embryo E14.CNhs10594.409-16E1941.50
liver, embryo E15.CNhs10520.433-16D71233.39
liver, embryo E16.CNhs10523.462-17F51146.80
liver, embryo E17.CNhs10510.481-18A31252.00
liver, embryo E18.CNhs10579.499-43G4803.54
liver, neonate N00.CNhs11117.641-24F4744.20
liver, neonate N03.CNhs11123.1345-25G2626.55
liver, neonate N06.CNhs11101.684-20A8189.77
liver, neonate N07.CNhs11103.716-20H2219.56
liver, neonate N10.CNhs11115.751-24B989.87
liver, neonate N20.CNhs11220.823-25A326.27
liver, neonate N25.CNhs11198.1368-26H149.33
liver, neonate N30.CNhs11106.1382-42D111.10
lung, adult.CNhs10474.28-22B140.28
lung, embryo E12.CNhs10522.354-16G2683.87
lung, embryo E14.CNhs10604.404-26F8363.09
lung, embryo E15.CNhs11020.432-17C5596.48
lung, embryo E16.CNhs10998.458-17B6444.03
lung, embryo E17.CNhs10605.480-44A6184.42
lung, embryo E18.CNhs10583.1287-20I684.03
lung, neonate N00.CNhs11224.640-42C626.34
lung, neonate N06.CNhs11212.683-20E587.01
lung, neonate N07.CNhs11111.715-19A3130.00
lung, neonate N10.CNhs11219.750-23E642.57
lung, neonate N20.CNhs11109.822-18A423.27
lung, neonate N25.CNhs11119.1359-25C734.88
lung, neonate N30.CNhs11133.1394-42H246.87
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A125.63
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A148.41
mammary gland, adult lactating day02.CNhs10480.595-22B664.42
mammary gland, adult pregnant day19.CNhs10476.588-5H247.19
medulla oblongata, adult.CNhs10477.17-12C26.74
medulla oblongata, neonate N30.CNhs11200.1396-42A36.33
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C7377.21
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C248.22
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E1262.19
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E2253.79
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E3159.84
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D7129.52
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D8114.74
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D9119.46
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D4165.97
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D5101.12
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D686.17
olfactory brain, adult.CNhs10489.18-22I917.35
ovary, adult.CNhs10507.91-2I747.69
ovary, embryo E18.CNhs11040.505-44H7292.21
ovary, neonate N00.CNhs11217.1299-22I4160.93
oviduct, adult pregnant day01.CNhs10500.988-6G633.65
pancreas, adult.CNhs10486.34-16E423.89
pancreas, embryo E14.CNhs11012.405-44F4733.93
pancreas, embryo E15.CNhs11042.1556-45F2444.72
pancreas, embryo E16.CNhs11003.460-26E5265.56
pancreas, embryo E17.CNhs10599.1558-45G3167.73
pancreas, embryo E18.CNhs10580.1535-43I799.92
pancreas, neonate N00.CNhs11105.645-26G982.96
pancreas, neonate N01.CNhs11138.1531-43D7152.68
pancreas, neonate N02.CNhs11139.1539-43D8171.48
pancreas, neonate N16.CNhs11136.787-43B658.47
pancreas, neonate N25.CNhs11094.1555-45E244.28
pancreas, neonate N30.CNhs11182.1548-44H540.22
pituitary gland, adult.CNhs10493.21-1G821.11
pituitary gland, embryo E12.CNhs11018.346-16E6459.16
pituitary gland, embryo E13.CNhs11009.370-44C7394.54
pituitary gland, embryo E14.CNhs11037.398-44A5244.99
pituitary gland, embryo E15.CNhs10592.427-16B9105.52
pituitary gland, embryo E16.CNhs11036.449-43F6194.78
pituitary gland, embryo E17.CNhs11039.1265-44F5119.96
pituitary gland, neonate N00.CNhs11190.1308-22E9281.33
placenta, adult pregnant day10.CNhs10472.539-13I7107.24
placenta, adult pregnant day17.CNhs10464.577-18G321.82
prostate, adult.CNhs10470.859-1F817.64
skin, adult.CNhs10492.30-1C347.49
skin, neonate N00.CNhs11124.650-25G476.37
skin, neonate N03.CNhs11215.662-22H3132.87
skin, neonate N06.CNhs11097.693-20I5214.39
skin, neonate N10.CNhs11108.762-6C4131.97
small intestine, neonate N16.CNhs11114.790-21I1107.85
spinal cord, adult.CNhs10505.24-13C97.05
spleen, adult.CNhs10465.25-2G2983.87
spleen, embryo E16.CNhs11035.461-43C1481.09
spleen, embryo E18.CNhs11011.1271-21F2723.18
spleen, neonate N10.CNhs11116.752-24D12354.79
spleen, neonate N20.CNhs11112.824-19H11461.53
spleen, neonate N25.CNhs11099.1354-25G31117.12
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61158.91
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91360.33
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31307.51
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E3355.56
stomach, embryo E15.CNhs10603.1252-16G8235.24
stomach, embryo E16.CNhs11022.459-17D4305.87
stomach, embryo E17.CNhs11006.1035-18D5209.09
stomach, embryo E18.CNhs10999.1286-20C6177.53
stomach, neonate N03.CNhs11193.1340-24B8150.64
stomach, neonate N07.CNhs11210.718-18A990.67
stomach, neonate N25.CNhs11104.1355-25E450.00
stomach, neonate N30.CNhs11134.1386-42I186.32
submandibular gland, adult.CNhs10469.59-29C126.10
testis, adult.CNhs10504.57-7G543.40
testis, embryo E13.CNhs11031.389-23F5264.20
testis, embryo E15.CNhs11034.443-27C5391.14
testis, embryo E16.CNhs11033.470-26G5205.53
testis, embryo E17.CNhs11029.486-18I5404.01
testis, embryo E18.CNhs11027.503-18G5267.63
testis, neonate N00.CNhs11189.1300-22B7219.22
testis, neonate N07.CNhs11222.726-26I4104.68
testis, neonate N10.CNhs11204.763-44D945.19
testis, neonate N20.CNhs11110.839-18H365.71
testis, neonate N30.CNhs11130.1391-42E229.09
thymus, adult.CNhs10471.38-12B5474.02
thymus, embryo E14.CNhs11041.402-44I4686.83
thymus, embryo E15.CNhs11005.430-45I2601.58
thymus, embryo E16.CNhs11002.456-26C5733.14
thymus, embryo E17.CNhs10581.478-18C1530.81
thymus, embryo E18.CNhs10595.1273-19G4530.08
thymus, neonate N02.CNhs11181.1541-43F8723.46
thymus, neonate N03.CNhs11137.2104-43C7741.55
thymus, neonate N06.CNhs11197.681-26C4640.53
thymus, neonate N07.CNhs11211.713-19D3660.71
thymus, neonate N10.CNhs11194.748-24E4601.13
thymus, neonate N20.CNhs11186.820-7A2571.49
thymus, neonate N25.CNhs11125.1362-25G7533.40
thymus, neonate N30.CNhs11132.1393-42G2378.33
tongue, adult.CNhs10499.32-1B420.86
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H3258.39
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F7416.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G5173.76
urinary bladder, adult.CNhs10481.879-12E420.28
uterus, adult pregnant day19.CNhs10497.590-15F547.48
uterus, adult.CNhs10509.92-27E537.91
vagina, adult.CNhs10502.89-27D549.73
vesicular gland, adult.CNhs10491.51-27F828.09
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A119.20
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A217.49
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A321.77
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D728.87
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A427.40
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A518.13
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A615.53
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A719.36
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A815.41
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A922.78
whole body, embryo E11.CNhs11014.324-5I8989.20
whole body, embryo E12.CNhs10587.857-27C9180.36
whole body, embryo E13.CNhs10512.372-23H2401.22
whole body, embryo E14.5.CNhs10578.420-27D2374.14
whole body, embryo E14.CNhs10519.395-14B1792.97
whole body, embryo E16.CNhs10514.453-14F2339.01
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G5195.13
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G5181.93
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G5163.99
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G5196.09
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G5199.74
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G5191.64
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G5263.32
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G5217.94
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G5202.98
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G5181.47
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G5166.06
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G5169.76
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G5147.11
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G5177.96
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G5234.52
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G5250.24
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G5220.55
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G5222.23
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G5223.42
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G5191.65
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G5171.04
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G5156.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G5237.39
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G5120.08
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G5132.28
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G5167.06
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G5135.46
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G5194.60
whole body, embryo E17.5.CNhs10513.490-9F9216.63
whole body, embryo E17.CNhs10517.475-3I5235.82
whole body, embryo E18.CNhs10516.493-3B3150.42
whole body, neonate N00.CNhs10525.657-19C2177.27
whole body, neonate N01.CNhs10576.659-23C665.42
whole body, neonate N06.CNhs10515.692-21D1267.14
whole body, neonate N10.CNhs10518.761-6B4244.85





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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